RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 KRTAP4-12Q9BQ66 201 aa6.58□□□□□ -1.36
ATM-228ENST00000639240 ZMYND15Q9H091 742 aa6.58□□□□□ -1.36
ATM-228ENST00000639240 RRAGCQ9HB90 399 aa6.58□□□□□ -1.36
ATM-228ENST00000639240 MKL2Q9ULH7 1088 aa6.58□□□□□ -1.36
ATM-228ENST00000639240 MSTNO14793 375 aa6.57□□□□□ -1.36
ATM-228ENST00000639240 ATP9BO43861 1147 aa6.57□□□□□ -1.36
ATM-228ENST00000639240 TATP17735 454 aaPredicted RBP6.57□□□□□ -1.36
ATM-228ENST00000639240 SAMD5Q5TGI4 173 aa6.57□□□□□ -1.36
ATM-228ENST00000639240 CCDC102BQ68D86 513 aa6.57□□□□□ -1.36
ATM-228ENST00000639240 POTEAQ6S8J7 498 aa6.57□□□□□ -1.36
ATM-228ENST00000639240 TSPAN10Q9H1Z9 355 aaPredicted RBP6.57□□□□□ -1.36
ATM-228ENST00000639240 ZNF777Q9ULD5 760 aaPredicted RBP6.57□□□□□ -1.36
ATM-228ENST00000639240 BTBD11A6QL63 1104 aa6.56□□□□□ -1.36
ATM-228ENST00000639240 C21orf2O43822 256 aa6.56□□□□□ -1.36
ATM-228ENST00000639240 LRRC69Q6ZNQ3 347 aa6.56□□□□□ -1.36
ATM-228ENST00000639240 C14orf37Q86TY3 774 aa6.56□□□□□ -1.36
ATM-228ENST00000639240 OGFOD1Q8N543 542 aa6.56□□□□□ -1.36
ATM-228ENST00000639240 GLMNQ92990 594 aa6.56□□□□□ -1.36
ATM-228ENST00000639240 MKRN1Q9UHC7 482 aaKnown RBP6.56□□□□□ -1.36
ATM-228ENST00000639240 SFI1A8K8P3 1242 aa6.55□□□□□ -1.36
ATM-228ENST00000639240 ADAM23O75077 832 aa6.55□□□□□ -1.36
ATM-228ENST00000639240 AMPD1P23109 780 aa6.55□□□□□ -1.36
ATM-228ENST00000639240 SFSWAPQ12872 951 aaKnown RBP6.55□□□□□ -1.36
ATM-228ENST00000639240 ZNF468Q5VIY5 522 aaPredicted RBP6.55□□□□□ -1.36
ATM-228ENST00000639240 BICDL1Q6ZP65 573 aa6.55□□□□□ -1.36
ATM-228ENST00000639240 CHSY3Q70JA7 882 aa6.55□□□□□ -1.36
ATM-228ENST00000639240 CALR3Q96L12 384 aaKnown RBP6.55□□□□□ -1.36
ATM-228ENST00000639240 SLC30A3Q99726 388 aa6.55□□□□□ -1.36
ATM-228ENST00000639240 MARK1Q9P0L2 795 aa6.55□□□□□ -1.36
ATM-228ENST00000639240 ADH6P28332 368 aa6.54□□□□□ -1.36
ATM-228ENST00000639240 TSEN2Q8NCE0 465 aaKnown RBP6.54□□□□□ -1.36
ATM-228ENST00000639240 ZNF280CQ8ND82 737 aa6.54□□□□□ -1.36
ATM-228ENST00000639240 TRIM11Q96F44 468 aa6.54□□□□□ -1.36
ATM-228ENST00000639240 AVENQ9NQS1 362 aaPredicted RBP6.54□□□□□ -1.36
ATM-228ENST00000639240 HCN4Q9Y3Q4 1203 aa6.54□□□□□ -1.36
ATM-228ENST00000639240 SERTM1A2A2V5 107 aa6.53□□□□□ -1.36
ATM-228ENST00000639240 TRIM50Q86XT4 487 aa6.53□□□□□ -1.36
ATM-228ENST00000639240 SIX5Q8N196 739 aa6.53□□□□□ -1.36
ATM-228ENST00000639240 LARGE2Q8N3Y3 721 aa6.53□□□□□ -1.36
ATM-228ENST00000639240 GAS2L2Q8NHY3 880 aa6.53□□□□□ -1.36
ATM-228ENST00000639240 ZNF594Q96JF6 807 aaPredicted RBP6.53□□□□□ -1.36
ATM-228ENST00000639240 HSH2DQ96JZ2 352 aa6.53□□□□□ -1.36
ATM-228ENST00000639240 TFIP11Q9UBB9 837 aaKnown RBP6.53□□□□□ -1.36
ATM-228ENST00000639240 ZNF232Q9UNY5 417 aa6.53□□□□□ -1.36
ATM-228ENST00000639240 C1QTNF9BB2RNN3 333 aa6.52□□□□□ -1.37
ATM-228ENST00000639240 GNB5O14775 395 aa6.52□□□□□ -1.37
ATM-228ENST00000639240 CHRNA4P43681 627 aa6.52□□□□□ -1.37
ATM-228ENST00000639240 COL9A3Q14050 684 aaPredicted RBP6.52□□□□□ -1.37
ATM-228ENST00000639240 SYT9Q86SS6 491 aa6.52□□□□□ -1.37
ATM-228ENST00000639240 CD163Q86VB7 1156 aa6.52□□□□□ -1.37
ATM-228ENST00000639240 GJA3Q9Y6H8 435 aa6.52□□□□□ -1.37
ATM-228ENST00000639240 PALM3A6NDB9 673 aaPredicted RBP6.51□□□□□ -1.37
ATM-228ENST00000639240 M0R2N6 131 aa6.51□□□□□ -1.37
ATM-228ENST00000639240 LGR5O75473 907 aa6.51□□□□□ -1.37
ATM-228ENST00000639240 BAG6P46379 1132 aa6.51□□□□□ -1.37
ATM-228ENST00000639240 ATP1A2P50993 1020 aa6.51□□□□□ -1.37
ATM-228ENST00000639240 HIRAP54198 1017 aaPredicted RBP6.51□□□□□ -1.37
ATM-228ENST00000639240 LAMC2Q13753 1193 aa6.51□□□□□ -1.37
ATM-228ENST00000639240 PHACTR1Q9C0D0 580 aa6.51□□□□□ -1.37
ATM-228ENST00000639240 PRR12Q9ULL5 1215 aa6.51□□□□□ -1.37
ATM-228ENST00000639240 STARD13Q9Y3M8 1113 aa6.51□□□□□ -1.37
ATM-228ENST00000639240 MAFBQ9Y5Q3 323 aaPredicted RBP6.51□□□□□ -1.37
ATM-228ENST00000639240 PSMA6P60900 246 aaKnown RBP6.5□□□□□ -1.37
ATM-228ENST00000639240 KANK4Q5T7N3 995 aaPredicted RBP6.5□□□□□ -1.37
ATM-228ENST00000639240 RAB44Q7Z6P3 723 aaPredicted RBP6.5□□□□□ -1.37
ATM-228ENST00000639240 RHPN1Q8TCX5 695 aa6.5□□□□□ -1.37
ATM-228ENST00000639240 ELOA3CA0A087WX78 387 aaPredicted RBP6.49□□□□□ -1.37
ATM-228ENST00000639240 ELOA3DA6NLF2 546 aaPredicted RBP6.49□□□□□ -1.37
ATM-228ENST00000639240 ELOA3BQ3SY89 546 aa6.49□□□□□ -1.37
ATM-228ENST00000639240 CRTC2Q53ET0 693 aaPredicted RBP6.49□□□□□ -1.37
ATM-228ENST00000639240 C1orf53Q5VUE5 145 aa6.49□□□□□ -1.37
ATM-228ENST00000639240 C8orf86Q6ZUL3 223 aa6.49□□□□□ -1.37
ATM-228ENST00000639240 Q8N3U1 123 aa6.49□□□□□ -1.37
ATM-228ENST00000639240 ELOA3Q8NG57 546 aa6.49□□□□□ -1.37
ATM-228ENST00000639240 SUSD3Q96L08 255 aa6.49□□□□□ -1.37
ATM-228ENST00000639240 C2orf49Q9BVC5 232 aaPredicted RBP6.49□□□□□ -1.37
ATM-228ENST00000639240 ATAD2Q6PL18 1390 aa6.48□□□□□ -1.37
ATM-228ENST00000639240 SIN3BO75182 1162 aa6.48□□□□□ -1.37
ATM-228ENST00000639240 FURINP09958 794 aa6.48□□□□□ -1.37
ATM-228ENST00000639240 ITGB7P26010 798 aa6.48□□□□□ -1.37
ATM-228ENST00000639240 TYRO3Q06418 890 aa6.48□□□□□ -1.37
ATM-228ENST00000639240 ALYREFQ86V81 257 aaKnown RBP6.48□□□□□ -1.37
ATM-228ENST00000639240 PLVAPQ9BX97 442 aa6.48□□□□□ -1.37
ATM-228ENST00000639240 GPC6Q9Y625 555 aaPredicted RBP6.48□□□□□ -1.37
ATM-228ENST00000639240 ARID3CA6NKF2 412 aa6.47□□□□□ -1.37
ATM-228ENST00000639240 ADARB2-AS1A8MUL3 147 aa6.47□□□□□ -1.37
ATM-228ENST00000639240 PPP1R12BO60237 982 aaPredicted RBP6.47□□□□□ -1.37
ATM-228ENST00000639240 RASA1P20936 1047 aa6.47□□□□□ -1.37
ATM-228ENST00000639240 GRNP28799 593 aaKnown RBP6.47□□□□□ -1.37
ATM-228ENST00000639240 PTK7Q13308 1070 aa6.47□□□□□ -1.37
ATM-228ENST00000639240 ALDH16A1Q8IZ83 802 aa6.47□□□□□ -1.37
ATM-228ENST00000639240 SCG3Q8WXD2 468 aaKnown RBP6.47□□□□□ -1.37
ATM-228ENST00000639240 PPP1R12CQ9BZL4 782 aa6.47□□□□□ -1.37
ATM-228ENST00000639240 BRD7Q9NPI1 651 aa6.47□□□□□ -1.37
ATM-228ENST00000639240 BCS1LQ9Y276 419 aa6.47□□□□□ -1.37
ATM-228ENST00000639240 ALBP02768 609 aa6.46□□□□□ -1.38
ATM-228ENST00000639240 KCNQ4P56696 695 aa6.46□□□□□ -1.38
ATM-228ENST00000639240 SPEM2Q0P670 501 aa6.46□□□□□ -1.38
ATM-228ENST00000639240 TNFRSF25Q93038 417 aa6.46□□□□□ -1.38
ATM-228ENST00000639240 CEP63Q96MT8 703 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms