RNA–Protein interactions for RNA: ENST00000639092.1

ARHGEF9-238, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 4,657 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-238	ENST00000639092	HMGN5	P82970	282 aa	Known RBP	10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	TTF1	Q15361	905 aa	Predicted RBP	10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	CHRNA2	Q15822	529 aa		10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	HSP90B2P	Q58FF3	399 aa		10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	AK7	Q96M32	723 aa		10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	ARHGEF10	O15013	1369 aa		10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	PI4KAP2	A4QPH2	592 aa		10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	HDAC1	Q13547	482 aa	Predicted RBP	10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	HSP90AB2P	Q58FF8	381 aa		10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	PI4KAP1	Q8N8J0	262 aa		10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	EVI5L	Q96CN4	794 aa		10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	SPINK5	Q9NQ38	1064 aa	Predicted RBP	10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	MAP3K2	Q9Y2U5	619 aa		10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	ZCRB1	Q8TBF4	217 aa	Known RBP	10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	SMARCC1	Q92922	1105 aa	Predicted RBP	10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	MINDY4B	A8MYZ0	360 aa		10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	CBFA2T2	O43439	604 aa		10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	PRPF40B	Q6NWY9	871 aa	Known RBP	10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	ANKRD13D	Q6ZTN6	518 aa		10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	UBE3B	Q7Z3V4	1068 aa		10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	PPFIBP1	Q86W92	1011 aa		10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	NUP62CL	Q9H1M0	184 aa		10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	ZHX3	Q9H4I2	956 aa		10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	GPT	P24298	496 aa		10.02	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	CAGE1	Q8TC20	777 aa		10.02	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	UPF3B	Q9BZI7	483 aa	Known RBP	10.02	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	SEC63	Q9UGP8	760 aa	Known RBP	10.02	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	ATP7B	P35670	1465 aa		10.02	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	PRDM15	P57071	1507 aa	Predicted RBP	10.02	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	LMTK2	Q8IWU2	1503 aa		10.02	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	SMARCA5	O60264	1052 aa	Predicted RBP	10.02	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	ZNF76	P36508	570 aa		10.02	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	BRPF1	P55201	1214 aa	Predicted RBP	10.02	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	WDHD1	O75717	1129 aa	Predicted RBP	10.02	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	DDX46	Q7L014	1031 aa	Known RBP	10.02	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	LRRC59	Q96AG4	307 aa	Known RBP	10.02	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	SCAND2P	Q9GZW5	306 aa	Predicted RBP	10.02	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	CROCC2	H7BZ55	1655 aa		10.01	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	ZNF213	O14771	459 aa		10.01	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	SYNM	O15061	1565 aa		10.01	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	ERCC4	Q92889	916 aa	Predicted RBP	10.01	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	ZMYM4	Q5VZL5	1548 aa		10.01	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	KIF24	Q5T7B8	1368 aa		10.01	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	BMP2KL	Q5H9B9	411 aa		10.01	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.01	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	PDCL3	Q9H2J4	239 aa		10.01	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	ERCC6L2	Q5T890	1561 aa		10.01	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	MAP3K5	Q99683	1374 aa		10.01	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	SSB	P05455	408 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	MCM4	P33991	863 aa		10.01	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	C20orf194	Q5TEA3	1177 aa		10.01	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	PHAX	Q9H814	394 aa	Known RBP	10.01	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	AATK	Q6ZMQ8	1374 aa		10.01	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	RTL1	A6NKG5	1358 aa		10	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	MPHOSPH10	O00566	681 aa	Known RBP	10	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	GC	P02774	474 aa		10	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	UQCRFS1P1	P0C7P4	283 aa		10	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	SPTY2D1	Q68D10	685 aa	Predicted RBP	10	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	UBAP1L	F5GYI3	381 aa		10	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	C6orf229	H3BNL8	230 aa		10	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	DDX11	Q96FC9	970 aa		10	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	TNIP1	Q15025	636 aa		10	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	KDM5C	P41229	1560 aa		10	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	FAM83G	A6ND36	823 aa		10	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	BAG3	O95817	575 aa		10	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	RAB34	Q9BZG1	259 aa		10	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	SMTNL1	A8MU46	457 aa		9.99	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	RFC4	P35249	363 aa		9.99	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	CCDC83	Q8IWF9	413 aa		9.99	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	DCAF5	Q96JK2	942 aa		9.99	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	C8orf76	Q96K31	380 aa		9.99	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	9.99	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	LIMCH1	Q9UPQ0	1083 aa		9.99	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	ATP5J2-PTCD1	G3V325	749 aa		9.99	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	HOXC9	P31274	260 aa		9.99	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	SET	Q01105	290 aa	Predicted RBP	9.99	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	CCDC152	Q4G0S7	254 aa		9.99	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	DEF6	Q9H4E7	631 aa		9.99	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	RANBP6	O60518	1105 aa	Known RBP	9.99	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	TANGO6	Q9C0B7	1094 aa		9.99	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	SLC12A7	Q9Y666	1083 aa		9.99	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	BLM	P54132	1417 aa	Predicted RBP	9.99	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	MAP3K11	Q16584	847 aa		9.98	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	HMG20B	Q9P0W2	317 aa		9.98	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	PLA2R1	Q13018	1463 aa		9.98	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	MAP3K19	Q56UN5	1328 aa		9.98	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	KDM6B	O15054	1643 aa		9.98	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	ZFY	P08048	801 aa	Predicted RBP	9.98	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	MTERF4	Q7Z6M4	381 aa	Known RBP	9.98	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	UGGT1	Q9NYU2	1555 aa		9.98	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	IFIT3	O14879	490 aa	Known RBP	9.98	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	DDB1	Q16531	1140 aa		9.98	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	TTLL5	Q6EMB2	1281 aa		9.98	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	NCKAP5L	Q9HCH0	1330 aa		9.98	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	IL13	P35225	146 aa		9.98	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	NBPF6	Q5VWK0	638 aa		9.98	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	NBPF5P	Q86XG9	351 aa	Predicted RBP	9.98	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	NBPF4	Q96M43	638 aa		9.98	□□□□□ -0.81
ARHGEF9-238	ENST00000639092	PPP1R12B	O60237	982 aa	Predicted RBP	9.97	□□□□□ -0.81

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