RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 NUTM2AQ8IVF1 878 aaPredicted RBP13.27□□□□□ -0.28
TARDBP-230ENST00000639083 JARID2Q92833 1246 aaPredicted RBP13.27□□□□□ -0.28
TARDBP-230ENST00000639083 KCPQ6ZWJ8 1503 aa13.27□□□□□ -0.29
TARDBP-230ENST00000639083 DISP2A7MBM2 1401 aa13.27□□□□□ -0.29
TARDBP-230ENST00000639083 COL22A1Q8NFW1 1626 aaPredicted RBP13.27□□□□□ -0.29
TARDBP-230ENST00000639083 TOM1O60784 492 aa13.27□□□□□ -0.29
TARDBP-230ENST00000639083 OS9Q13438 667 aaPredicted RBP13.27□□□□□ -0.29
TARDBP-230ENST00000639083 TTLL7Q6ZT98 887 aa13.27□□□□□ -0.29
TARDBP-230ENST00000639083 COL16A1Q07092 1604 aaPredicted RBP13.26□□□□□ -0.29
TARDBP-230ENST00000639083 CASC1Q6TDU7 716 aa13.26□□□□□ -0.29
TARDBP-230ENST00000639083 TNS2Q63HR2 1409 aa13.26□□□□□ -0.29
TARDBP-230ENST00000639083 EPHA10Q5JZY3 1008 aa13.25□□□□□ -0.29
TARDBP-230ENST00000639083 KIF2CQ99661 725 aa13.25□□□□□ -0.29
TARDBP-230ENST00000639083 ATG3Q9NT62 314 aa13.25□□□□□ -0.29
TARDBP-230ENST00000639083 TRIM6-TRIM34B2RNG4 842 aa13.25□□□□□ -0.29
TARDBP-230ENST00000639083 RILPL2Q969X0 211 aa13.25□□□□□ -0.29
TARDBP-230ENST00000639083 A0A087WZG4 1122 aa13.24□□□□□ -0.29
TARDBP-230ENST00000639083 UBE3BQ7Z3V4 1068 aa13.24□□□□□ -0.29
TARDBP-230ENST00000639083 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
TARDBP-230ENST00000639083 EIF5BO60841 1220 aaKnown RBP13.24□□□□□ -0.29
TARDBP-230ENST00000639083 UNC5CLQ8IV45 518 aa13.24□□□□□ -0.29
TARDBP-230ENST00000639083 SYTL4Q96C24 671 aaPredicted RBP13.24□□□□□ -0.29
TARDBP-230ENST00000639083 USP26Q9BXU7 913 aa13.24□□□□□ -0.29
TARDBP-230ENST00000639083 UBR2Q8IWV8 1755 aa13.24□□□□□ -0.29
TARDBP-230ENST00000639083 PHLPP1O60346 1717 aa13.23□□□□□ -0.29
TARDBP-230ENST00000639083 TOGARAM1Q9Y4F4 1720 aa13.23□□□□□ -0.29
TARDBP-230ENST00000639083 DNAJC10Q8IXB1 793 aa13.23□□□□□ -0.29
TARDBP-230ENST00000639083 KLHDC4Q8TBB5 520 aa13.23□□□□□ -0.29
TARDBP-230ENST00000639083 SLKQ9H2G2 1235 aaPredicted RBP13.23□□□□□ -0.29
TARDBP-230ENST00000639083 ZBTB3Q9H5J0 574 aa13.23□□□□□ -0.29
TARDBP-230ENST00000639083 SPATA31A1Q5TZJ5 1347 aa13.23□□□□□ -0.29
TARDBP-230ENST00000639083 CLASRPQ8N2M8 674 aaKnown RBP13.23□□□□□ -0.29
TARDBP-230ENST00000639083 AOX1Q06278 1338 aa13.22□□□□□ -0.29
TARDBP-230ENST00000639083 PAPPAQ13219 1627 aa13.22□□□□□ -0.29
TARDBP-230ENST00000639083 G3BP1Q13283 466 aaKnown RBP eCLIP13.22□□□□□ -0.295e-9■□□□□ 10.1
TARDBP-230ENST00000639083 ERC1Q8IUD2 1116 aa13.22□□□□□ -0.29
TARDBP-230ENST00000639083 VSIG10Q8N0Z9 540 aa13.22□□□□□ -0.29
TARDBP-230ENST00000639083 SPRYD3Q8NCJ5 442 aa13.22□□□□□ -0.29
TARDBP-230ENST00000639083 PI4K2BQ8TCG2 481 aa13.22□□□□□ -0.29
TARDBP-230ENST00000639083 SIL1Q9H173 461 aa13.22□□□□□ -0.29
TARDBP-230ENST00000639083 ZNF330Q9Y3S2 320 aaPredicted RBP13.22□□□□□ -0.29
TARDBP-230ENST00000639083 LAMB4A4D0S4 1761 aa13.22□□□□□ -0.29
TARDBP-230ENST00000639083 ERC2O15083 957 aa13.22□□□□□ -0.29
TARDBP-230ENST00000639083 SASH1O94885 1247 aa13.22□□□□□ -0.29
TARDBP-230ENST00000639083 MAP4K4O95819 1239 aaPredicted RBP13.22□□□□□ -0.29
TARDBP-230ENST00000639083 PRIM1P49642 420 aaKnown RBP13.22□□□□□ -0.29
TARDBP-230ENST00000639083 TEX13AQ9BXU3 409 aaPredicted RBP13.22□□□□□ -0.29
TARDBP-230ENST00000639083 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.22□□□□□ -0.29
TARDBP-230ENST00000639083 UBAP1LF5GYI3 381 aa13.21□□□□□ -0.29
TARDBP-230ENST00000639083 CASP7P55210 303 aa13.21□□□□□ -0.29
TARDBP-230ENST00000639083 RTL5Q5HYW3 569 aaPredicted RBP13.21□□□□□ -0.29
TARDBP-230ENST00000639083 THRAP3Q9Y2W1 955 aaKnown RBP13.21□□□□□ -0.29
TARDBP-230ENST00000639083 BCL9O00512 1426 aa13.21□□□□□ -0.3
TARDBP-230ENST00000639083 REC8O95072 547 aa13.2□□□□□ -0.3
TARDBP-230ENST00000639083 STARD3NLO95772 234 aa13.2□□□□□ -0.3
TARDBP-230ENST00000639083 CHMLP26374 656 aa13.2□□□□□ -0.3
TARDBP-230ENST00000639083 DDB1Q16531 1140 aa13.2□□□□□ -0.3
TARDBP-230ENST00000639083 HSCBQ8IWL3 235 aa13.2□□□□□ -0.3
TARDBP-230ENST00000639083 SLC4A9Q96Q91 983 aa13.2□□□□□ -0.3
TARDBP-230ENST00000639083 CCDC9Q9Y3X0 531 aaKnown RBP13.2□□□□□ -0.3
TARDBP-230ENST00000639083 H7C1W4 665 aa13.2□□□□□ -0.3
TARDBP-230ENST00000639083 SNX21Q969T3 373 aa13.2□□□□□ -0.3
TARDBP-230ENST00000639083 CDCA7Q9BWT1 371 aaPredicted RBP13.2□□□□□ -0.3
TARDBP-230ENST00000639083 CWC25Q9NXE8 425 aaPredicted RBP13.2□□□□□ -0.3
TARDBP-230ENST00000639083 IFIT2P09913 472 aaKnown RBP13.19□□□□□ -0.3
TARDBP-230ENST00000639083 RABL6Q3YEC7 729 aaPredicted RBP13.19□□□□□ -0.3
TARDBP-230ENST00000639083 ESYT1Q9BSJ8 1104 aa13.19□□□□□ -0.3
TARDBP-230ENST00000639083 ANTXR1Q9H6X2 564 aa13.19□□□□□ -0.3
TARDBP-230ENST00000639083 ARFGEF2Q9Y6D5 1785 aa13.19□□□□□ -0.3
TARDBP-230ENST00000639083 AACSQ86V21 672 aa13.19□□□□□ -0.3
TARDBP-230ENST00000639083 ARXQ96QS3 562 aa13.19□□□□□ -0.3
TARDBP-230ENST00000639083 KAT6BQ8WYB5 2073 aa13.19□□□□□ -0.3
TARDBP-230ENST00000639083 SPATA31A5Q5VU36 1347 aa13.19□□□□□ -0.3
TARDBP-230ENST00000639083 TTC41PQ6P2S7 1318 aa13.19□□□□□ -0.3
TARDBP-230ENST00000639083 SPATA31A7Q8IWB4 1347 aa13.19□□□□□ -0.3
TARDBP-230ENST00000639083 CD2BP2O95400 341 aaKnown RBP13.18□□□□□ -0.3
TARDBP-230ENST00000639083 RFX5P48382 616 aaPredicted RBP13.18□□□□□ -0.3
TARDBP-230ENST00000639083 PTPN12Q05209 780 aaKnown RBP13.18□□□□□ -0.3
TARDBP-230ENST00000639083 NFKBIBQ15653 356 aa13.18□□□□□ -0.3
TARDBP-230ENST00000639083 LMBR1LQ6UX01 489 aa13.18□□□□□ -0.3
TARDBP-230ENST00000639083 CCDC191Q8NCU4 936 aa13.18□□□□□ -0.3
TARDBP-230ENST00000639083 EAF2Q96CJ1 260 aaPredicted RBP13.18□□□□□ -0.3
TARDBP-230ENST00000639083 USP42Q9H9J4 1324 aaKnown RBP13.18□□□□□ -0.3
TARDBP-230ENST00000639083 A0A0G2JS52 829 aa13.18□□□□□ -0.3
TARDBP-230ENST00000639083 FOXO4P98177 505 aa13.18□□□□□ -0.3
TARDBP-230ENST00000639083 CCDC8Q9H0W5 538 aaPredicted RBP13.18□□□□□ -0.3
TARDBP-230ENST00000639083 COPRSQ9NQ92 184 aa13.18□□□□□ -0.3
TARDBP-230ENST00000639083 ECHDC1Q9NTX5 307 aa13.18□□□□□ -0.3
TARDBP-230ENST00000639083 COL15A1P39059 1388 aa13.17□□□□□ -0.3
TARDBP-230ENST00000639083 PLCH1Q4KWH8 1693 aa13.17□□□□□ -0.3
TARDBP-230ENST00000639083 GLRX3O76003 335 aaKnown RBP13.17□□□□□ -0.3
TARDBP-230ENST00000639083 CYP19A1P11511 503 aaPredicted RBP13.17□□□□□ -0.3
TARDBP-230ENST00000639083 MARCH10Q8NA82 808 aaPredicted RBP13.17□□□□□ -0.3
TARDBP-230ENST00000639083 ACSBG1Q96GR2 724 aa13.17□□□□□ -0.3
TARDBP-230ENST00000639083 ITGB4P16144 1822 aa13.17□□□□□ -0.3
TARDBP-230ENST00000639083 TCIRG1Q13488 830 aa13.16□□□□□ -0.3
TARDBP-230ENST00000639083 CNTROBQ8N137 903 aa13.16□□□□□ -0.3
TARDBP-230ENST00000639083 GPATCH3Q96I76 525 aa13.16□□□□□ -0.3
TARDBP-230ENST00000639083 ISCA1Q9BUE6 129 aa13.16□□□□□ -0.3
TARDBP-230ENST00000639083 IL25Q9H293 177 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms