RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 ADAMTS19Q8TE59 1207 aa8.17□□□□□ -1.1
CCDC7-211ENST00000638889 NEUROD4Q9HD90 331 aa8.17□□□□□ -1.1
CCDC7-211ENST00000638889 STRN4Q9NRL3 753 aa8.17□□□□□ -1.1
CCDC7-211ENST00000638889 ATP9BO43861 1147 aa8.16□□□□□ -1.1
CCDC7-211ENST00000638889 BAG6P46379 1132 aa8.16□□□□□ -1.1
CCDC7-211ENST00000638889 HDGFL1Q5TGJ6 251 aa8.16□□□□□ -1.1
CCDC7-211ENST00000638889 LARGE2Q8N3Y3 721 aa8.16□□□□□ -1.1
CCDC7-211ENST00000638889 PALM3A6NDB9 673 aaPredicted RBP8.15□□□□□ -1.1
CCDC7-211ENST00000638889 HIRAP54198 1017 aaPredicted RBP8.15□□□□□ -1.1
CCDC7-211ENST00000638889 PSMA6P60900 246 aaKnown RBP8.15□□□□□ -1.1
CCDC7-211ENST00000638889 C1orf53Q5VUE5 145 aa8.15□□□□□ -1.1
CCDC7-211ENST00000638889 POTEAQ6S8J7 498 aa8.15□□□□□ -1.1
CCDC7-211ENST00000638889 LRRC69Q6ZNQ3 347 aa8.15□□□□□ -1.1
CCDC7-211ENST00000638889 UCN2Q96RP3 112 aa8.15□□□□□ -1.1
CCDC7-211ENST00000638889 CHMP3Q9Y3E7 222 aa8.15□□□□□ -1.1
CCDC7-211ENST00000638889 ELOA3CA0A087WX78 387 aaPredicted RBP8.14□□□□□ -1.11
CCDC7-211ENST00000638889 ELOA3DA6NLF2 546 aaPredicted RBP8.14□□□□□ -1.11
CCDC7-211ENST00000638889 K7ELQ4 463 aaPredicted RBP8.14□□□□□ -1.11
CCDC7-211ENST00000638889 SIN3BO75182 1162 aa8.14□□□□□ -1.11
CCDC7-211ENST00000638889 ALAS2P22557 587 aa8.14□□□□□ -1.11
CCDC7-211ENST00000638889 CLDN10P78369 228 aa8.14□□□□□ -1.11
CCDC7-211ENST00000638889 ELOA3BQ3SY89 546 aa8.14□□□□□ -1.11
CCDC7-211ENST00000638889 TBCELQ5QJ74 424 aa8.14□□□□□ -1.11
CCDC7-211ENST00000638889 ELOA3Q8NG57 546 aa8.14□□□□□ -1.11
CCDC7-211ENST00000638889 ANKIB1Q9P2G1 1089 aa8.14□□□□□ -1.11
CCDC7-211ENST00000638889 KIAA1024Q9UPX6 916 aa8.14□□□□□ -1.11
CCDC7-211ENST00000638889 ADARB2-AS1A8MUL3 147 aa8.13□□□□□ -1.11
CCDC7-211ENST00000638889 SYT9Q86SS6 491 aa8.13□□□□□ -1.11
CCDC7-211ENST00000638889 SIX5Q8N196 739 aa8.13□□□□□ -1.11
CCDC7-211ENST00000638889 OGFOD1Q8N543 542 aa8.13□□□□□ -1.11
CCDC7-211ENST00000638889 RHPN1Q8TCX5 695 aa8.13□□□□□ -1.11
CCDC7-211ENST00000638889 MDFIQ99750 246 aa8.13□□□□□ -1.11
CCDC7-211ENST00000638889 MKRN1Q9UHC7 482 aaKnown RBP8.13□□□□□ -1.11
CCDC7-211ENST00000638889 C1QTNF9BB2RNN3 333 aa8.12□□□□□ -1.11
CCDC7-211ENST00000638889 TSPAN10Q9H1Z9 355 aaPredicted RBP8.12□□□□□ -1.11
CCDC7-211ENST00000638889 RBM19Q9Y4C8 960 aaKnown RBP8.12□□□□□ -1.11
CCDC7-211ENST00000638889 SH3PXD2AQ5TCZ1 1133 aa8.11□□□□□ -1.11
CCDC7-211ENST00000638889 CD163Q86VB7 1156 aa8.11□□□□□ -1.11
CCDC7-211ENST00000638889 TNFRSF25Q93038 417 aa8.11□□□□□ -1.11
CCDC7-211ENST00000638889 SPDYE3A6NKU9 549 aa8.1□□□□□ -1.11
CCDC7-211ENST00000638889 KCNQ4P56696 695 aa8.1□□□□□ -1.11
CCDC7-211ENST00000638889 SFSWAPQ12872 951 aaKnown RBP8.1□□□□□ -1.11
CCDC7-211ENST00000638889 NEUROD1Q13562 356 aa8.1□□□□□ -1.11
CCDC7-211ENST00000638889 STAG2Q8N3U4 1231 aa8.1□□□□□ -1.11
CCDC7-211ENST00000638889 GAS2L2Q8NHY3 880 aa8.1□□□□□ -1.11
CCDC7-211ENST00000638889 TRIM11Q96F44 468 aa8.1□□□□□ -1.11
CCDC7-211ENST00000638889 PLVAPQ9BX97 442 aa8.1□□□□□ -1.11
CCDC7-211ENST00000638889 DKK1O94907 266 aa8.09□□□□□ -1.11
CCDC7-211ENST00000638889 SPATA31C1P0DKV0 1188 aa8.09□□□□□ -1.11
CCDC7-211ENST00000638889 PHACTR1Q9C0D0 580 aa8.09□□□□□ -1.11
CCDC7-211ENST00000638889 PRDM6Q9NQX0 595 aa8.09□□□□□ -1.11
CCDC7-211ENST00000638889 HCN4Q9Y3Q4 1203 aa8.09□□□□□ -1.11
CCDC7-211ENST00000638889 CHRNA4P43681 627 aa8.08□□□□□ -1.12
CCDC7-211ENST00000638889 SPEM2Q0P670 501 aa8.08□□□□□ -1.12
CCDC7-211ENST00000638889 HIF1AQ16665 826 aa8.08□□□□□ -1.12
CCDC7-211ENST00000638889 CEP63Q96MT8 703 aa8.08□□□□□ -1.12
CCDC7-211ENST00000638889 BRD7Q9NPI1 651 aa8.08□□□□□ -1.12
CCDC7-211ENST00000638889 PPP1R12BO60237 982 aaPredicted RBP8.07□□□□□ -1.12
CCDC7-211ENST00000638889 FURINP09958 794 aa8.07□□□□□ -1.12
CCDC7-211ENST00000638889 FNBP4Q8N3X1 1017 aaPredicted RBP8.07□□□□□ -1.12
CCDC7-211ENST00000638889 TSEN2Q8NCE0 465 aaKnown RBP8.07□□□□□ -1.12
CCDC7-211ENST00000638889 ZNF594Q96JF6 807 aaPredicted RBP8.07□□□□□ -1.12
CCDC7-211ENST00000638889 SLC30A3Q99726 388 aa8.07□□□□□ -1.12
CCDC7-211ENST00000638889 KCNH4Q9UQ05 1017 aa8.07□□□□□ -1.12
CCDC7-211ENST00000638889 SFI1A8K8P3 1242 aa8.06□□□□□ -1.12
CCDC7-211ENST00000638889 RASA1P20936 1047 aa8.06□□□□□ -1.12
CCDC7-211ENST00000638889 SEC13P55735 322 aa8.06□□□□□ -1.12
CCDC7-211ENST00000638889 TYRO3Q06418 890 aa8.06□□□□□ -1.12
CCDC7-211ENST00000638889 PRRT3Q5FWE3 981 aa8.06□□□□□ -1.12
CCDC7-211ENST00000638889 PROSER2Q86WR7 435 aaPredicted RBP8.06□□□□□ -1.12
CCDC7-211ENST00000638889 GLMNQ92990 594 aa8.06□□□□□ -1.12
CCDC7-211ENST00000638889 HSH2DQ96JZ2 352 aa8.06□□□□□ -1.12
CCDC7-211ENST00000638889 SUSD3Q96L08 255 aa8.06□□□□□ -1.12
CCDC7-211ENST00000638889 C2orf49Q9BVC5 232 aaPredicted RBP8.06□□□□□ -1.12
CCDC7-211ENST00000638889 ATAD2Q6PL18 1390 aa8.06□□□□□ -1.12
CCDC7-211ENST00000638889 C21orf2O43822 256 aa8.05□□□□□ -1.12
CCDC7-211ENST00000638889 ALDH16A1Q8IZ83 802 aa8.05□□□□□ -1.12
CCDC7-211ENST00000638889 EFCC1Q9HA90 598 aa8.05□□□□□ -1.12
CCDC7-211ENST00000638889 TFIP11Q9UBB9 837 aaKnown RBP8.05□□□□□ -1.12
CCDC7-211ENST00000638889 MAFBQ9Y5Q3 323 aaPredicted RBP8.05□□□□□ -1.12
CCDC7-211ENST00000638889 M0R082 166 aa8.04□□□□□ -1.12
CCDC7-211ENST00000638889 TMEM132AQ24JP5 1023 aa8.04□□□□□ -1.12
CCDC7-211ENST00000638889 ZNF280CQ8ND82 737 aa8.04□□□□□ -1.12
CCDC7-211ENST00000638889 ZNF417Q8TAU3 575 aa8.04□□□□□ -1.12
CCDC7-211ENST00000638889 ZNF587Q96SQ5 575 aaPredicted RBP8.04□□□□□ -1.12
CCDC7-211ENST00000638889 STARD13Q9Y3M8 1113 aa8.04□□□□□ -1.12
CCDC7-211ENST00000638889 ADH7P40394 386 aa8.03□□□□□ -1.12
CCDC7-211ENST00000638889 GATA4P43694 442 aa8.03□□□□□ -1.12
CCDC7-211ENST00000638889 LARP1Q6PKG0 1096 aaKnown RBP8.03□□□□□ -1.12
CCDC7-211ENST00000638889 MICALL1Q8N3F8 863 aa8.03□□□□□ -1.12
CCDC7-211ENST00000638889 CLUAP1Q96AJ1 413 aa8.03□□□□□ -1.12
CCDC7-211ENST00000638889 COL9A3Q14050 684 aaPredicted RBP8.02□□□□□ -1.13
CCDC7-211ENST00000638889 IER5Q5VY09 327 aa8.02□□□□□ -1.13
CCDC7-211ENST00000638889 BTLAQ7Z6A9 289 aa8.02□□□□□ -1.13
CCDC7-211ENST00000638889 SCG3Q8WXD2 468 aaKnown RBP8.02□□□□□ -1.13
CCDC7-211ENST00000638889 ALBP02768 609 aa8.01□□□□□ -1.13
CCDC7-211ENST00000638889 C20orf204Q6ZNR8 217 aa8.01□□□□□ -1.13
CCDC7-211ENST00000638889 A6NJR5 290 aa8□□□□□ -1.13
CCDC7-211ENST00000638889 APBA3O96018 575 aa8□□□□□ -1.13
CCDC7-211ENST00000638889 NID1P14543 1247 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms