RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 SIK1P57059 783 aa16.43■□□□□ 0.22
SCN8A-215ENST00000638820 C16orf71Q8IYS4 520 aaPredicted RBP16.43■□□□□ 0.22
SCN8A-215ENST00000638820 ZBTB1Q9Y2K1 713 aa16.43■□□□□ 0.22
SCN8A-215ENST00000638820 TNS2Q63HR2 1409 aa16.42■□□□□ 0.22
SCN8A-215ENST00000638820 NPHP1O15259 732 aa16.42■□□□□ 0.22
SCN8A-215ENST00000638820 KCNQ4P56696 695 aa16.42■□□□□ 0.22
SCN8A-215ENST00000638820 CWC25Q9NXE8 425 aaPredicted RBP16.42■□□□□ 0.22
SCN8A-215ENST00000638820 MFAP1P55081 439 aaKnown RBP16.42■□□□□ 0.22
SCN8A-215ENST00000638820 GCKRQ14397 625 aa16.42■□□□□ 0.22
SCN8A-215ENST00000638820 HSP90AB4PQ58FF6 505 aa16.42■□□□□ 0.22
SCN8A-215ENST00000638820 SCN11AQ9UI33 1791 aa16.41■□□□□ 0.22
SCN8A-215ENST00000638820 TAF7LQ5H9L4 462 aa16.41■□□□□ 0.22
SCN8A-215ENST00000638820 VSIG10Q8N0Z9 540 aa16.41■□□□□ 0.22
SCN8A-215ENST00000638820 CCDC85AQ96PX6 553 aaPredicted RBP16.41■□□□□ 0.22
SCN8A-215ENST00000638820 TRIM6-TRIM34B2RNG4 842 aa16.41■□□□□ 0.22
SCN8A-215ENST00000638820 SEPT12Q8IYM1 358 aa16.41■□□□□ 0.22
SCN8A-215ENST00000638820 CACNA1FO60840 1977 aa16.4■□□□□ 0.22
SCN8A-215ENST00000638820 IGKV5-2P06315 115 aa16.4■□□□□ 0.22
SCN8A-215ENST00000638820 BICC1Q9H694 974 aaKnown RBP16.4■□□□□ 0.22
SCN8A-215ENST00000638820 DZIP3Q86Y13 1208 aaKnown RBP16.4■□□□□ 0.22
SCN8A-215ENST00000638820 SUCLG2Q96I99 432 aa16.4■□□□□ 0.22
SCN8A-215ENST00000638820 PA2G4Q9UQ80 394 aaKnown RBP16.4■□□□□ 0.22
SCN8A-215ENST00000638820 SLIT2O94813 1529 aa16.39■□□□□ 0.21
SCN8A-215ENST00000638820 GTF2E1P29083 439 aaPredicted RBP16.38■□□□□ 0.21
SCN8A-215ENST00000638820 CASC1Q6TDU7 716 aa16.38■□□□□ 0.21
SCN8A-215ENST00000638820 CLASRPQ8N2M8 674 aaKnown RBP16.38■□□□□ 0.21
SCN8A-215ENST00000638820 DISP2A7MBM2 1401 aa16.38■□□□□ 0.21
SCN8A-215ENST00000638820 RILPL2Q969X0 211 aa16.38■□□□□ 0.21
SCN8A-215ENST00000638820 BCL9O00512 1426 aa16.38■□□□□ 0.21
SCN8A-215ENST00000638820 KDM3BQ7LBC6 1761 aa16.38■□□□□ 0.21
SCN8A-215ENST00000638820 PALLDQ8WX93 1383 aa16.38■□□□□ 0.21
SCN8A-215ENST00000638820 PKD1L3Q7Z443 1732 aa16.37■□□□□ 0.21
SCN8A-215ENST00000638820 TSHZ3Q63HK5 1081 aa16.37■□□□□ 0.21
SCN8A-215ENST00000638820 OTUD7AQ8TE49 926 aaPredicted RBP16.37■□□□□ 0.21
SCN8A-215ENST00000638820 CCDC87Q9NVE4 849 aa16.37■□□□□ 0.21
SCN8A-215ENST00000638820 IFIT2P09913 472 aaKnown RBP16.37■□□□□ 0.21
SCN8A-215ENST00000638820 CYP19A1P11511 503 aaPredicted RBP16.37■□□□□ 0.21
SCN8A-215ENST00000638820 NUTM1Q86Y26 1132 aa16.37■□□□□ 0.21
SCN8A-215ENST00000638820 KIF1BPQ96EK5 621 aa16.37■□□□□ 0.21
SCN8A-215ENST00000638820 C8orf34Q49A92 452 aa16.37■□□□□ 0.21
SCN8A-215ENST00000638820 COL22A1Q8NFW1 1626 aaPredicted RBP16.36■□□□□ 0.21
SCN8A-215ENST00000638820 CRKLP46109 303 aaKnown RBP16.36■□□□□ 0.21
SCN8A-215ENST00000638820 LMBR1LQ6UX01 489 aa16.36■□□□□ 0.21
SCN8A-215ENST00000638820 TRMT112Q9UI30 125 aaKnown RBP16.36■□□□□ 0.21
SCN8A-215ENST00000638820 BCL9LQ86UU0 1499 aa16.36■□□□□ 0.21
SCN8A-215ENST00000638820 ATP10DQ9P241 1426 aa16.36■□□□□ 0.21
SCN8A-215ENST00000638820 HSP90AB3PQ58FF7 597 aa16.36■□□□□ 0.21
SCN8A-215ENST00000638820 VIRMAQ69YN4 1812 aaKnown RBP16.36■□□□□ 0.21
SCN8A-215ENST00000638820 BICDL1Q6ZP65 573 aa16.35■□□□□ 0.21
SCN8A-215ENST00000638820 KLHDC4Q8TBB5 520 aa16.35■□□□□ 0.21
SCN8A-215ENST00000638820 SSH3Q8TE77 659 aa16.35■□□□□ 0.21
SCN8A-215ENST00000638820 FAM89AQ96GI7 184 aa16.35■□□□□ 0.21
SCN8A-215ENST00000638820 RHPN1Q8TCX5 695 aa16.35■□□□□ 0.21
SCN8A-215ENST00000638820 RAB11FIP3O75154 756 aa16.35■□□□□ 0.21
SCN8A-215ENST00000638820 TCIRG1Q13488 830 aa16.35■□□□□ 0.21
SCN8A-215ENST00000638820 CCDC191Q8NCU4 936 aa16.35■□□□□ 0.21
SCN8A-215ENST00000638820 SLC4A9Q96Q91 983 aa16.35■□□□□ 0.21
SCN8A-215ENST00000638820 CCNL1Q9UK58 526 aaPredicted RBP16.35■□□□□ 0.21
SCN8A-215ENST00000638820 GPATCH3Q96I76 525 aa16.34■□□□□ 0.21
SCN8A-215ENST00000638820 MRC1P22897 1456 aa16.34■□□□□ 0.21
SCN8A-215ENST00000638820 ERC1Q8IUD2 1116 aa16.34■□□□□ 0.21
SCN8A-215ENST00000638820 PLEKHM2Q8IWE5 1019 aa16.34■□□□□ 0.21
SCN8A-215ENST00000638820 PXDNLA1KZ92 1463 aa16.34■□□□□ 0.21
SCN8A-215ENST00000638820 MX1P20591 662 aa16.34■□□□□ 0.21
SCN8A-215ENST00000638820 PLCH1Q4KWH8 1693 aa16.33■□□□□ 0.21
SCN8A-215ENST00000638820 IL6STP40189 918 aaPredicted RBP16.33■□□□□ 0.2
SCN8A-215ENST00000638820 CCDC57Q2TAC2 916 aa16.33■□□□□ 0.2
SCN8A-215ENST00000638820 MAP3K15Q6ZN16 1313 aa16.33■□□□□ 0.2
SCN8A-215ENST00000638820 AACSQ86V21 672 aa16.32■□□□□ 0.2
SCN8A-215ENST00000638820 BMP2KLQ5H9B9 411 aa16.32■□□□□ 0.2
SCN8A-215ENST00000638820 LRP6O75581 1613 aa16.32■□□□□ 0.2
SCN8A-215ENST00000638820 HLFQ16534 295 aa16.32■□□□□ 0.2
SCN8A-215ENST00000638820 GIGYF2Q6Y7W6 1299 aaKnown RBP16.32■□□□□ 0.2
SCN8A-215ENST00000638820 PHF14O94880 888 aa16.31■□□□□ 0.2
SCN8A-215ENST00000638820 PTF1AQ7RTS3 328 aa16.31■□□□□ 0.2
SCN8A-215ENST00000638820 GNPATO15228 680 aa16.31■□□□□ 0.2
SCN8A-215ENST00000638820 ITPK1Q13572 414 aa16.31■□□□□ 0.2
SCN8A-215ENST00000638820 NEUROD6Q96NK8 337 aa16.31■□□□□ 0.2
SCN8A-215ENST00000638820 ZNF652Q9Y2D9 606 aa16.31■□□□□ 0.2
SCN8A-215ENST00000638820 MAP4K4O95819 1239 aaPredicted RBP16.3■□□□□ 0.2
SCN8A-215ENST00000638820 PDE1AP54750 535 aa16.3■□□□□ 0.2
SCN8A-215ENST00000638820 KRT27Q7Z3Y8 459 aa16.3■□□□□ 0.2
SCN8A-215ENST00000638820 LRP10Q7Z4F1 713 aa16.3■□□□□ 0.2
SCN8A-215ENST00000638820 NIP7Q9Y221 180 aaKnown RBP eCLIP16.3■□□□□ 0.2
SCN8A-215ENST00000638820 CDC45O75419 566 aa16.3■□□□□ 0.2
SCN8A-215ENST00000638820 EPHA10Q5JZY3 1008 aa16.3■□□□□ 0.2
SCN8A-215ENST00000638820 CCDC8Q9H0W5 538 aaPredicted RBP16.3■□□□□ 0.2
SCN8A-215ENST00000638820 MSH5O43196 834 aa16.3■□□□□ 0.2
SCN8A-215ENST00000638820 DDRGK1Q96HY6 314 aa16.3■□□□□ 0.2
SCN8A-215ENST00000638820 ZPR1O75312 459 aa16.29■□□□□ 0.2
SCN8A-215ENST00000638820 TRIM37O94972 964 aa16.29■□□□□ 0.2
SCN8A-215ENST00000638820 SEC24BO95487 1268 aa16.29■□□□□ 0.2
SCN8A-215ENST00000638820 GORABQ5T7V8 394 aa16.29■□□□□ 0.2
SCN8A-215ENST00000638820 TTC22Q5TAA0 569 aa16.29■□□□□ 0.2
SCN8A-215ENST00000638820 ZNF772Q68DY9 489 aaPredicted RBP16.29■□□□□ 0.2
SCN8A-215ENST00000638820 AK7Q96M32 723 aa16.29■□□□□ 0.2
SCN8A-215ENST00000638820 IBTKQ9P2D0 1353 aaPredicted RBP16.29■□□□□ 0.2
SCN8A-215ENST00000638820 ERC2O15083 957 aa16.28■□□□□ 0.2
SCN8A-215ENST00000638820 RTCBQ9Y3I0 505 aaKnown RBP16.28■□□□□ 0.2
SCN8A-215ENST00000638820 POLA2Q14181 598 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms