RNA–Protein interactions for RNA: ENST00000638799.1

RTTN-213, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,943 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-213ENST00000638799 SALL3Q9BXA9 1300 aa9.09□□□□□ -0.95
RTTN-213ENST00000638799 SURF6O75683 361 aaKnown RBP9.09□□□□□ -0.95
RTTN-213ENST00000638799 SDSP20132 328 aa9.09□□□□□ -0.95
RTTN-213ENST00000638799 PDE1AP54750 535 aa9.09□□□□□ -0.95
RTTN-213ENST00000638799 ANKRD13DQ6ZTN6 518 aa9.09□□□□□ -0.95
RTTN-213ENST00000638799 JARID2Q92833 1246 aaPredicted RBP9.09□□□□□ -0.95
RTTN-213ENST00000638799 MYD88Q99836 296 aa9.09□□□□□ -0.95
RTTN-213ENST00000638799 DISP2A7MBM2 1401 aa9.09□□□□□ -0.95
RTTN-213ENST00000638799 NUTM2BA6NNL0 878 aaPredicted RBP9.09□□□□□ -0.95
RTTN-213ENST00000638799 NUTM2EB1AL46 878 aaPredicted RBP9.09□□□□□ -0.95
RTTN-213ENST00000638799 A1BGP04217 495 aa9.09□□□□□ -0.95
RTTN-213ENST00000638799 NUTM2AQ8IVF1 878 aaPredicted RBP9.09□□□□□ -0.95
RTTN-213ENST00000638799 HOMEZQ8IX15 550 aa9.09□□□□□ -0.95
RTTN-213ENST00000638799 PAPPAQ13219 1627 aa9.09□□□□□ -0.95
RTTN-213ENST00000638799 GRM8O00222 908 aa9.09□□□□□ -0.95
RTTN-213ENST00000638799 PIGBQ92521 554 aa9.09□□□□□ -0.95
RTTN-213ENST00000638799 SUCLG2Q96I99 432 aa9.09□□□□□ -0.95
RTTN-213ENST00000638799 ASAP1Q9ULH1 1129 aa9.09□□□□□ -0.95
RTTN-213ENST00000638799 NEURL1BA8MQ27 555 aa9.08□□□□□ -0.96
RTTN-213ENST00000638799 METTL22Q9BUU2 404 aaPredicted RBP9.08□□□□□ -0.96
RTTN-213ENST00000638799 TMOD3Q9NYL9 352 aa9.08□□□□□ -0.96
RTTN-213ENST00000638799 LAMB4A4D0S4 1761 aa9.08□□□□□ -0.96
RTTN-213ENST00000638799 CDC45O75419 566 aa9.08□□□□□ -0.96
RTTN-213ENST00000638799 PA2G4Q9UQ80 394 aaKnown RBP9.08□□□□□ -0.96
RTTN-213ENST00000638799 KAT6BQ8WYB5 2073 aa9.08□□□□□ -0.96
RTTN-213ENST00000638799 PLCH1Q4KWH8 1693 aa9.07□□□□□ -0.96
RTTN-213ENST00000638799 TNS2Q63HR2 1409 aa9.07□□□□□ -0.96
RTTN-213ENST00000638799 ATP5J2-PTCD1G3V325 749 aa9.07□□□□□ -0.96
RTTN-213ENST00000638799 GCKRQ14397 625 aa9.07□□□□□ -0.96
RTTN-213ENST00000638799 TTLL7Q6ZT98 887 aa9.07□□□□□ -0.96
RTTN-213ENST00000638799 OSBPL3Q9H4L5 887 aa9.07□□□□□ -0.96
RTTN-213ENST00000638799 BICC1Q9H694 974 aaKnown RBP9.07□□□□□ -0.96
RTTN-213ENST00000638799 UTYO14607 1347 aa9.07□□□□□ -0.96
RTTN-213ENST00000638799 MTX1Q13505 466 aa9.07□□□□□ -0.96
RTTN-213ENST00000638799 EPHA10Q5JZY3 1008 aa9.07□□□□□ -0.96
RTTN-213ENST00000638799 NUTM1Q86Y26 1132 aa9.07□□□□□ -0.96
RTTN-213ENST00000638799 GOLGA6L3A6NEY3 463 aa9.07□□□□□ -0.96
RTTN-213ENST00000638799 MX1P20591 662 aa9.07□□□□□ -0.96
RTTN-213ENST00000638799 RHPN1Q8TCX5 695 aa9.07□□□□□ -0.96
RTTN-213ENST00000638799 NEXNQ0ZGT2 675 aa9.06□□□□□ -0.96
RTTN-213ENST00000638799 ATG3Q9NT62 314 aa9.06□□□□□ -0.96
RTTN-213ENST00000638799 ARFGEF2Q9Y6D5 1785 aa9.06□□□□□ -0.96
RTTN-213ENST00000638799 ITGB4P16144 1822 aa9.06□□□□□ -0.96
RTTN-213ENST00000638799 NCLP19338 710 aaKnown RBP9.06□□□□□ -0.96
RTTN-213ENST00000638799 TBC1D2Q9BYX2 928 aa9.06□□□□□ -0.96
RTTN-213ENST00000638799 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.06□□□□□ -0.96
RTTN-213ENST00000638799 EXOC5O00471 708 aa9.05□□□□□ -0.96
RTTN-213ENST00000638799 TOM1O60784 492 aa9.05□□□□□ -0.96
RTTN-213ENST00000638799 RBM25P49756 843 aaKnown RBP9.05□□□□□ -0.96
RTTN-213ENST00000638799 KLHDC4Q8TBB5 520 aa9.05□□□□□ -0.96
RTTN-213ENST00000638799 RAB11FIP3O75154 756 aa9.05□□□□□ -0.96
RTTN-213ENST00000638799 KCNA4P22459 653 aa9.05□□□□□ -0.96
RTTN-213ENST00000638799 UNC5CLQ8IV45 518 aa9.05□□□□□ -0.96
RTTN-213ENST00000638799 DNAJC10Q8IXB1 793 aa9.05□□□□□ -0.96
RTTN-213ENST00000638799 FAM43AQ8N2R8 423 aa9.05□□□□□ -0.96
RTTN-213ENST00000638799 PLBD2Q8NHP8 589 aa9.05□□□□□ -0.96
RTTN-213ENST00000638799 SYTL4Q96C24 671 aaPredicted RBP9.05□□□□□ -0.96
RTTN-213ENST00000638799 KIF2CQ99661 725 aa9.05□□□□□ -0.96
RTTN-213ENST00000638799 SPATA31A1Q5TZJ5 1347 aa9.05□□□□□ -0.96
RTTN-213ENST00000638799 AFDNP55196 1824 aaKnown RBP9.05□□□□□ -0.96
RTTN-213ENST00000638799 TUBGCP6Q96RT7 1819 aa9.05□□□□□ -0.96
RTTN-213ENST00000638799 NRAPQ86VF7 1730 aa9.05□□□□□ -0.96
RTTN-213ENST00000638799 SLC4A9Q96Q91 983 aa9.05□□□□□ -0.96
RTTN-213ENST00000638799 RBM42Q9BTD8 480 aaKnown RBP9.05□□□□□ -0.96
RTTN-213ENST00000638799 ZBTB3Q9H5J0 574 aa9.05□□□□□ -0.96
RTTN-213ENST00000638799 UBE3BQ7Z3V4 1068 aa9.04□□□□□ -0.96
RTTN-213ENST00000638799 KIF1BPQ96EK5 621 aa9.04□□□□□ -0.96
RTTN-213ENST00000638799 STAP2Q9UGK3 403 aa9.04□□□□□ -0.96
RTTN-213ENST00000638799 WNK3Q9BYP7 1800 aa9.04□□□□□ -0.96
RTTN-213ENST00000638799 UBAP1LF5GYI3 381 aa9.04□□□□□ -0.96
RTTN-213ENST00000638799 OS9Q13438 667 aaPredicted RBP9.04□□□□□ -0.96
RTTN-213ENST00000638799 ZNF330Q9Y3S2 320 aaPredicted RBP9.04□□□□□ -0.96
RTTN-213ENST00000638799 ERBB4Q15303 1308 aa9.04□□□□□ -0.96
RTTN-213ENST00000638799 BCL9O00512 1426 aa9.04□□□□□ -0.96
RTTN-213ENST00000638799 MAP4K4O95819 1239 aaPredicted RBP9.03□□□□□ -0.96
RTTN-213ENST00000638799 SIL1Q9H173 461 aa9.03□□□□□ -0.96
RTTN-213ENST00000638799 A0A087WZG4 1122 aa9.03□□□□□ -0.96
RTTN-213ENST00000638799 PRIM1P49642 420 aaKnown RBP9.03□□□□□ -0.96
RTTN-213ENST00000638799 NUP188Q5SRE5 1749 aa9.03□□□□□ -0.96
RTTN-213ENST00000638799 CASP7P55210 303 aa9.03□□□□□ -0.96
RTTN-213ENST00000638799 PI4K2BQ8TCG2 481 aa9.03□□□□□ -0.96
RTTN-213ENST00000638799 RILPL2Q969X0 211 aa9.03□□□□□ -0.96
RTTN-213ENST00000638799 TRIM6-TRIM34B2RNG4 842 aa9.02□□□□□ -0.96
RTTN-213ENST00000638799 SASH1O94885 1247 aa9.02□□□□□ -0.96
RTTN-213ENST00000638799 CCDC9Q9Y3X0 531 aaKnown RBP9.02□□□□□ -0.96
RTTN-213ENST00000638799 SPATA31A5Q5VU36 1347 aa9.02□□□□□ -0.97
RTTN-213ENST00000638799 SPATA31A7Q8IWB4 1347 aa9.02□□□□□ -0.97
RTTN-213ENST00000638799 DNTTIP2Q5QJE6 756 aaKnown RBP9.02□□□□□ -0.97
RTTN-213ENST00000638799 USP26Q9BXU7 913 aa9.02□□□□□ -0.97
RTTN-213ENST00000638799 DDB1Q16531 1140 aa9.02□□□□□ -0.97
RTTN-213ENST00000638799 MARCH10Q8NA82 808 aaPredicted RBP9.02□□□□□ -0.97
RTTN-213ENST00000638799 ACSBG1Q96GR2 724 aa9.02□□□□□ -0.97
RTTN-213ENST00000638799 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.02□□□□□ -0.97
RTTN-213ENST00000638799 A0A0G2JS52 829 aa9.01□□□□□ -0.97
RTTN-213ENST00000638799 CD2BP2O95400 341 aaKnown RBP9.01□□□□□ -0.97
RTTN-213ENST00000638799 HSP90AB4PQ58FF6 505 aa9.01□□□□□ -0.97
RTTN-213ENST00000638799 HDAC5Q9UQL6 1122 aa9.01□□□□□ -0.97
RTTN-213ENST00000638799 SLIT2O94813 1529 aa9.01□□□□□ -0.97
RTTN-213ENST00000638799 DOT1LQ8TEK3 1739 aa9.01□□□□□ -0.97
RTTN-213ENST00000638799 TPRNQ4KMQ1 711 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms