RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 RBM25P49756 843 aaKnown RBP20.43■□□□□ 0.86
HCG27-205ENST00000638546 PIGBQ92521 554 aa20.43■□□□□ 0.86
HCG27-205ENST00000638546 KIF1BPQ96EK5 621 aa20.43■□□□□ 0.86
HCG27-205ENST00000638546 LAMB4A4D0S4 1761 aa20.42■□□□□ 0.86
HCG27-205ENST00000638546 RHPN1Q8TCX5 695 aa20.42■□□□□ 0.86
HCG27-205ENST00000638546 TEX13AQ9BXU3 409 aaPredicted RBP20.42■□□□□ 0.86
HCG27-205ENST00000638546 THRAP3Q9Y2W1 955 aaKnown RBP20.42■□□□□ 0.86
HCG27-205ENST00000638546 UBR2Q8IWV8 1755 aa20.42■□□□□ 0.86
HCG27-205ENST00000638546 CASC1Q6TDU7 716 aa20.42■□□□□ 0.86
HCG27-205ENST00000638546 AOX1Q06278 1338 aa20.42■□□□□ 0.86
HCG27-205ENST00000638546 A1BGP04217 495 aa20.41■□□□□ 0.86
HCG27-205ENST00000638546 VSIG10Q8N0Z9 540 aa20.41■□□□□ 0.86
HCG27-205ENST00000638546 KAZALD1Q96I82 304 aa20.41■□□□□ 0.86
HCG27-205ENST00000638546 SPATA31A1Q5TZJ5 1347 aa20.4■□□□□ 0.86
HCG27-205ENST00000638546 NUTM2BA6NNL0 878 aaPredicted RBP20.4■□□□□ 0.86
HCG27-205ENST00000638546 NUTM2EB1AL46 878 aaPredicted RBP20.4■□□□□ 0.86
HCG27-205ENST00000638546 NUTM2AQ8IVF1 878 aaPredicted RBP20.4■□□□□ 0.86
HCG27-205ENST00000638546 BICC1Q9H694 974 aaKnown RBP20.4■□□□□ 0.86
HCG27-205ENST00000638546 IL1RAPL2Q9NP60 686 aa20.4■□□□□ 0.86
HCG27-205ENST00000638546 ATG3Q9NT62 314 aa20.4■□□□□ 0.86
HCG27-205ENST00000638546 OS9Q13438 667 aaPredicted RBP20.39■□□□□ 0.86
HCG27-205ENST00000638546 ERC1Q8IUD2 1116 aa20.39■□□□□ 0.86
HCG27-205ENST00000638546 ASAP1Q9ULH1 1129 aa20.39■□□□□ 0.86
HCG27-205ENST00000638546 TOGARAM1Q9Y4F4 1720 aa20.39■□□□□ 0.85
HCG27-205ENST00000638546 PLCH1Q4KWH8 1693 aa20.38■□□□□ 0.85
HCG27-205ENST00000638546 TTLL7Q6ZT98 887 aa20.37■□□□□ 0.85
HCG27-205ENST00000638546 COL15A1P39059 1388 aa20.36■□□□□ 0.85
HCG27-205ENST00000638546 SPATA31A6Q5VVP1 1343 aa20.36■□□□□ 0.85
HCG27-205ENST00000638546 NUTM1Q86Y26 1132 aa20.36■□□□□ 0.85
HCG27-205ENST00000638546 LRP6O75581 1613 aa20.36■□□□□ 0.85
HCG27-205ENST00000638546 ATP5J2-PTCD1G3V325 749 aa20.35■□□□□ 0.85
HCG27-205ENST00000638546 STARD3NLO95772 234 aa20.35■□□□□ 0.85
HCG27-205ENST00000638546 TSHZ3Q63HK5 1081 aa20.35■□□□□ 0.85
HCG27-205ENST00000638546 DNAJC10Q8IXB1 793 aa20.35■□□□□ 0.85
HCG27-205ENST00000638546 BCL9O00512 1426 aa20.35■□□□□ 0.85
HCG27-205ENST00000638546 SPATA31A5Q5VU36 1347 aa20.35■□□□□ 0.85
HCG27-205ENST00000638546 SPATA31A7Q8IWB4 1347 aa20.35■□□□□ 0.85
HCG27-205ENST00000638546 A0A087WZG4 1122 aa20.35■□□□□ 0.85
HCG27-205ENST00000638546 G3BP1Q13283 466 aaKnown RBP eCLIP20.35■□□□□ 0.85
HCG27-205ENST00000638546 RBM42Q9BTD8 480 aaKnown RBP20.35■□□□□ 0.85
HCG27-205ENST00000638546 TBC1D2Q9BYX2 928 aa20.35■□□□□ 0.85
HCG27-205ENST00000638546 PA2G4Q9UQ80 394 aaKnown RBP20.35■□□□□ 0.85
HCG27-205ENST00000638546 DDB1Q16531 1140 aa20.34■□□□□ 0.85
HCG27-205ENST00000638546 CLASRPQ8N2M8 674 aaKnown RBP20.34■□□□□ 0.85
HCG27-205ENST00000638546 H7C1W4 665 aa20.33■□□□□ 0.84
HCG27-205ENST00000638546 EPHA10Q5JZY3 1008 aa20.33■□□□□ 0.84
HCG27-205ENST00000638546 CWC25Q9NXE8 425 aaPredicted RBP20.33■□□□□ 0.84
HCG27-205ENST00000638546 USP42Q9H9J4 1324 aaKnown RBP20.32■□□□□ 0.84
HCG27-205ENST00000638546 CASP7P55210 303 aa20.32■□□□□ 0.84
HCG27-205ENST00000638546 BARGINQ6ZT62 677 aa20.32■□□□□ 0.84
HCG27-205ENST00000638546 UBE3BQ7Z3V4 1068 aa20.32■□□□□ 0.84
HCG27-205ENST00000638546 NRAPQ86VF7 1730 aa20.32■□□□□ 0.84
HCG27-205ENST00000638546 SLIT2O94813 1529 aa20.32■□□□□ 0.84
HCG27-205ENST00000638546 TRIM6-TRIM34B2RNG4 842 aa20.31■□□□□ 0.84
HCG27-205ENST00000638546 ERC2O15083 957 aa20.31■□□□□ 0.84
HCG27-205ENST00000638546 RABL6Q3YEC7 729 aaPredicted RBP20.31■□□□□ 0.84
HCG27-205ENST00000638546 USP26Q9BXU7 913 aa20.31■□□□□ 0.84
HCG27-205ENST00000638546 ARFGEF2Q9Y6D5 1785 aa20.31■□□□□ 0.84
HCG27-205ENST00000638546 REC8O95072 547 aa20.31■□□□□ 0.84
HCG27-205ENST00000638546 PRIM1P49642 420 aaKnown RBP20.31■□□□□ 0.84
HCG27-205ENST00000638546 CCDC191Q8NCU4 936 aa20.31■□□□□ 0.84
HCG27-205ENST00000638546 JARID2Q92833 1246 aaPredicted RBP20.31■□□□□ 0.84
HCG27-205ENST00000638546 RILPL2Q969X0 211 aa20.31■□□□□ 0.84
HCG27-205ENST00000638546 SYTL4Q96C24 671 aaPredicted RBP20.31■□□□□ 0.84
HCG27-205ENST00000638546 ZBTB3Q9H5J0 574 aa20.31■□□□□ 0.84
HCG27-205ENST00000638546 CCDC9Q9Y3X0 531 aaKnown RBP20.31■□□□□ 0.84
HCG27-205ENST00000638546 TTC41PQ6P2S7 1318 aa20.3■□□□□ 0.84
HCG27-205ENST00000638546 PI4K2BQ8TCG2 481 aa20.3■□□□□ 0.84
HCG27-205ENST00000638546 SNX21Q969T3 373 aa20.3■□□□□ 0.84
HCG27-205ENST00000638546 WNK3Q9BYP7 1800 aa20.29■□□□□ 0.84
HCG27-205ENST00000638546 KIF6Q6ZMV9 814 aa20.29■□□□□ 0.84
HCG27-205ENST00000638546 GPATCH3Q96I76 525 aa20.29■□□□□ 0.84
HCG27-205ENST00000638546 KIF2CQ99661 725 aa20.29■□□□□ 0.84
HCG27-205ENST00000638546 COPRSQ9NQ92 184 aa20.29■□□□□ 0.84
HCG27-205ENST00000638546 SASH1O94885 1247 aa20.28■□□□□ 0.84
HCG27-205ENST00000638546 IFIT2P09913 472 aaKnown RBP20.28■□□□□ 0.84
HCG27-205ENST00000638546 UNC5CLQ8IV45 518 aa20.28■□□□□ 0.84
HCG27-205ENST00000638546 HSCBQ8IWL3 235 aa20.28■□□□□ 0.84
HCG27-205ENST00000638546 CYP19A1P11511 503 aaPredicted RBP20.27■□□□□ 0.84
HCG27-205ENST00000638546 CHMLP26374 656 aa20.27■□□□□ 0.84
HCG27-205ENST00000638546 RFX5P48382 616 aaPredicted RBP20.27■□□□□ 0.84
HCG27-205ENST00000638546 TCIRG1Q13488 830 aa20.27■□□□□ 0.84
HCG27-205ENST00000638546 SLC4A9Q96Q91 983 aa20.27■□□□□ 0.84
HCG27-205ENST00000638546 ISCA1Q9BUE6 129 aa20.27■□□□□ 0.84
HCG27-205ENST00000638546 GLRX3O76003 335 aaKnown RBP20.27■□□□□ 0.83
HCG27-205ENST00000638546 MARCH10Q8NA82 808 aaPredicted RBP20.27■□□□□ 0.83
HCG27-205ENST00000638546 ESYT1Q9BSJ8 1104 aa20.27■□□□□ 0.83
HCG27-205ENST00000638546 ECHDC1Q9NTX5 307 aa20.27■□□□□ 0.83
HCG27-205ENST00000638546 ITGB4P16144 1822 aa20.27■□□□□ 0.83
HCG27-205ENST00000638546 NWD2Q9ULI1 1742 aa20.26■□□□□ 0.83
HCG27-205ENST00000638546 FOXO4P98177 505 aa20.26■□□□□ 0.83
HCG27-205ENST00000638546 TRIM28Q13263 835 aaKnown RBP20.26■□□□□ 0.83
HCG27-205ENST00000638546 NBR1Q14596 966 aa20.26■□□□□ 0.83
HCG27-205ENST00000638546 AACSQ86V21 672 aa20.26■□□□□ 0.83
HCG27-205ENST00000638546 C8orf37Q96NL8 207 aa20.26■□□□□ 0.83
HCG27-205ENST00000638546 MEX3CQ5U5Q3 659 aaKnown RBP20.25■□□□□ 0.83
HCG27-205ENST00000638546 CNTROBQ8N137 903 aa20.25■□□□□ 0.83
HCG27-205ENST00000638546 SIL1Q9H173 461 aa20.25■□□□□ 0.83
HCG27-205ENST00000638546 ZNF330Q9Y3S2 320 aaPredicted RBP20.25■□□□□ 0.83
HCG27-205ENST00000638546 PTPN12Q05209 780 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms