RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 CLASRPQ8N2M8 674 aaKnown RBP24.17■■□□□ 1.46
SYNGAP1-227ENST00000638142 PTMAP06454 111 aaKnown RBP24.17■■□□□ 1.46
SYNGAP1-227ENST00000638142 CNPY2Q9Y2B0 182 aa24.17■■□□□ 1.46
SYNGAP1-227ENST00000638142 SPG7Q9UQ90 795 aa24.16■■□□□ 1.46
SYNGAP1-227ENST00000638142 LMO7Q8WWI1 1683 aa24.16■■□□□ 1.46
SYNGAP1-227ENST00000638142 F13A1P00488 732 aa24.16■■□□□ 1.46
SYNGAP1-227ENST00000638142 TEFQ10587 303 aa24.16■■□□□ 1.46
SYNGAP1-227ENST00000638142 NBPF6Q5VWK0 638 aa24.16■■□□□ 1.46
SYNGAP1-227ENST00000638142 PLPPR3Q6T4P5 718 aa24.16■■□□□ 1.46
SYNGAP1-227ENST00000638142 C14orf37Q86TY3 774 aa24.16■■□□□ 1.46
SYNGAP1-227ENST00000638142 GPATCH3Q96I76 525 aa24.16■■□□□ 1.46
SYNGAP1-227ENST00000638142 NBPF4Q96M43 638 aa24.16■■□□□ 1.46
SYNGAP1-227ENST00000638142 NFAT5O94916 1531 aa24.15■■□□□ 1.46
SYNGAP1-227ENST00000638142 ADGRL3Q9HAR2 1447 aa24.15■■□□□ 1.46
SYNGAP1-227ENST00000638142 CASTP20810 708 aaKnown RBP24.15■■□□□ 1.46
SYNGAP1-227ENST00000638142 TM6SF1Q9BZW5 370 aa24.15■■□□□ 1.46
SYNGAP1-227ENST00000638142 HYPKQ9NX55 129 aa24.15■■□□□ 1.46
SYNGAP1-227ENST00000638142 HDAC5Q9UQL6 1122 aa24.15■■□□□ 1.46
SYNGAP1-227ENST00000638142 AKAP4Q5JQC9 854 aa24.15■■□□□ 1.46
SYNGAP1-227ENST00000638142 VPS53Q5VIR6 699 aa24.15■■□□□ 1.46
SYNGAP1-227ENST00000638142 ERC1Q8IUD2 1116 aa24.15■■□□□ 1.46
SYNGAP1-227ENST00000638142 ECHDC1Q9NTX5 307 aa24.15■■□□□ 1.46
SYNGAP1-227ENST00000638142 DBF4Q9UBU7 674 aaPredicted RBP24.15■■□□□ 1.46
SYNGAP1-227ENST00000638142 ALDH1L1O75891 902 aa24.14■■□□□ 1.45
SYNGAP1-227ENST00000638142 KCNB2Q92953 911 aa24.14■■□□□ 1.45
SYNGAP1-227ENST00000638142 ZSCAN31Q96LW9 406 aaPredicted RBP24.14■■□□□ 1.45
SYNGAP1-227ENST00000638142 BTBD11A6QL63 1104 aa24.13■■□□□ 1.45
SYNGAP1-227ENST00000638142 SH2B1Q9NRF2 756 aaPredicted RBP24.13■■□□□ 1.45
SYNGAP1-227ENST00000638142 PHF8Q9UPP1 1060 aa24.13■■□□□ 1.45
SYNGAP1-227ENST00000638142 KCNQ3O43525 872 aa24.13■■□□□ 1.45
SYNGAP1-227ENST00000638142 KIAA2012Q0VF49 1180 aa24.12■■□□□ 1.45
SYNGAP1-227ENST00000638142 ZSWIM6Q9HCJ5 1215 aa24.11■■□□□ 1.45
SYNGAP1-227ENST00000638142 PDRG1Q9NUG6 133 aa24.11■■□□□ 1.45
SYNGAP1-227ENST00000638142 UQCRHLA0A096LP55 91 aa24.11■■□□□ 1.45
SYNGAP1-227ENST00000638142 UQCRHP07919 91 aa24.11■■□□□ 1.45
SYNGAP1-227ENST00000638142 ZNF530Q6P9A1 599 aaPredicted RBP24.11■■□□□ 1.45
SYNGAP1-227ENST00000638142 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.11■■□□□ 1.45
SYNGAP1-227ENST00000638142 NCAPD2Q15021 1401 aa24.11■■□□□ 1.45
SYNGAP1-227ENST00000638142 ANXA1P04083 346 aa24.1■■□□□ 1.45
SYNGAP1-227ENST00000638142 PLEKHO1Q53GL0 409 aaPredicted RBP24.1■■□□□ 1.45
SYNGAP1-227ENST00000638142 EVI5LQ96CN4 794 aa24.1■■□□□ 1.45
SYNGAP1-227ENST00000638142 JAKMIP1Q96N16 626 aaKnown RBP24.1■■□□□ 1.45
SYNGAP1-227ENST00000638142 C9orf78Q9NZ63 289 aaPredicted RBP24.1■■□□□ 1.45
SYNGAP1-227ENST00000638142 CYP46A1Q9Y6A2 500 aa24.1■■□□□ 1.45
SYNGAP1-227ENST00000638142 PHRF1Q9P1Y6 1649 aaKnown RBP24.1■■□□□ 1.45
SYNGAP1-227ENST00000638142 IFIT2P09913 472 aaKnown RBP24.1■■□□□ 1.45
SYNGAP1-227ENST00000638142 RBM10P98175 930 aaKnown RBP24.1■■□□□ 1.45
SYNGAP1-227ENST00000638142 PTH1RQ03431 593 aa24.1■■□□□ 1.45
SYNGAP1-227ENST00000638142 LARP6Q9BRS8 491 aaKnown RBP24.1■■□□□ 1.45
SYNGAP1-227ENST00000638142 DYNC1I1O14576 645 aa24.09■■□□□ 1.45
SYNGAP1-227ENST00000638142 LARGE1O95461 756 aa24.09■■□□□ 1.45
SYNGAP1-227ENST00000638142 OVOS2A0A0G2JMS6 1433 aa24.09■■□□□ 1.45
SYNGAP1-227ENST00000638142 CPA1P15085 419 aa24.09■■□□□ 1.45
SYNGAP1-227ENST00000638142 GJB2P29033 226 aa24.09■■□□□ 1.45
SYNGAP1-227ENST00000638142 PRPF40BQ6NWY9 871 aaKnown RBP24.09■■□□□ 1.45
SYNGAP1-227ENST00000638142 SASS6Q6UVJ0 657 aa24.09■■□□□ 1.45
SYNGAP1-227ENST00000638142 CCDC83Q8IWF9 413 aa24.09■■□□□ 1.45
SYNGAP1-227ENST00000638142 KCNH5Q8NCM2 988 aa24.09■■□□□ 1.45
SYNGAP1-227ENST00000638142 MAP3K2Q9Y2U5 619 aa24.09■■□□□ 1.45
SYNGAP1-227ENST00000638142 FIBPO43427 364 aa24.08■■□□□ 1.45
SYNGAP1-227ENST00000638142 AMOTQ4VCS5 1084 aa24.08■■□□□ 1.45
SYNGAP1-227ENST00000638142 KSR2Q6VAB6 950 aa24.08■■□□□ 1.45
SYNGAP1-227ENST00000638142 MTMR6Q9Y217 621 aa24.08■■□□□ 1.45
SYNGAP1-227ENST00000638142 ZKSCAN1P17029 563 aaPredicted RBP24.07■■□□□ 1.44
SYNGAP1-227ENST00000638142 NECTIN1Q15223 517 aa24.07■■□□□ 1.44
SYNGAP1-227ENST00000638142 ADCK5Q3MIX3 580 aa24.07■■□□□ 1.44
SYNGAP1-227ENST00000638142 USP25Q9UHP3 1055 aa24.07■■□□□ 1.44
SYNGAP1-227ENST00000638142 CCDC171Q6TFL3 1326 aa24.07■■□□□ 1.44
SYNGAP1-227ENST00000638142 HIP1O00291 1037 aa24.07■■□□□ 1.44
SYNGAP1-227ENST00000638142 PDIA4P13667 645 aaKnown RBP24.07■■□□□ 1.44
SYNGAP1-227ENST00000638142 MTERF4Q7Z6M4 381 aaKnown RBP24.07■■□□□ 1.44
SYNGAP1-227ENST00000638142 FAM13BQ9NYF5 915 aa24.07■■□□□ 1.44
SYNGAP1-227ENST00000638142 MPRIPQ6WCQ1 1025 aa24.06■■□□□ 1.44
SYNGAP1-227ENST00000638142 FER1L4A9Z1Z3 1794 aa24.06■■□□□ 1.44
SYNGAP1-227ENST00000638142 RNMTO43148 476 aaKnown RBP24.06■■□□□ 1.44
SYNGAP1-227ENST00000638142 HCLS1P14317 486 aaPredicted RBP24.06■■□□□ 1.44
SYNGAP1-227ENST00000638142 HEG1Q9ULI3 1381 aa24.06■■□□□ 1.44
SYNGAP1-227ENST00000638142 CHD2O14647 1828 aaKnown RBP24.05■■□□□ 1.44
SYNGAP1-227ENST00000638142 GIGYF1O75420 1035 aaPredicted RBP24.05■■□□□ 1.44
SYNGAP1-227ENST00000638142 ADCY5O95622 1261 aa24.05■■□□□ 1.44
SYNGAP1-227ENST00000638142 AACSQ86V21 672 aa24.05■■□□□ 1.44
SYNGAP1-227ENST00000638142 FUCA2Q9BTY2 467 aa24.05■■□□□ 1.44
SYNGAP1-227ENST00000638142 C1orf141Q5JVX7 400 aa24.04■■□□□ 1.44
SYNGAP1-227ENST00000638142 PA2G4Q9UQ80 394 aaKnown RBP24.04■■□□□ 1.44
SYNGAP1-227ENST00000638142 RGPD2P0DJD1 1756 aa24.04■■□□□ 1.44
SYNGAP1-227ENST00000638142 DNM1Q05193 864 aaKnown RBP24.04■■□□□ 1.44
SYNGAP1-227ENST00000638142 SNRKQ9NRH2 765 aa24.04■■□□□ 1.44
SYNGAP1-227ENST00000638142 RBM8AQ9Y5S9 174 aaKnown RBP24.03■■□□□ 1.44
SYNGAP1-227ENST00000638142 UTYO14607 1347 aa24.03■■□□□ 1.44
SYNGAP1-227ENST00000638142 CREB3L3Q68CJ9 461 aa24.03■■□□□ 1.44
SYNGAP1-227ENST00000638142 LINS1Q8NG48 757 aa24.03■■□□□ 1.44
SYNGAP1-227ENST00000638142 PIBF1Q8WXW3 757 aa24.03■■□□□ 1.44
SYNGAP1-227ENST00000638142 MAP4K1Q92918 833 aa24.03■■□□□ 1.44
SYNGAP1-227ENST00000638142 KDM4AO75164 1064 aa24.02■■□□□ 1.44
SYNGAP1-227ENST00000638142 ST3GAL1Q11201 340 aa24.02■■□□□ 1.44
SYNGAP1-227ENST00000638142 ME3Q16798 604 aa24.02■■□□□ 1.44
SYNGAP1-227ENST00000638142 LRRC59Q96AG4 307 aaKnown RBP24.02■■□□□ 1.44
SYNGAP1-227ENST00000638142 PSMA5P28066 241 aa24.02■■□□□ 1.44
SYNGAP1-227ENST00000638142 PROSER3Q2NL68 480 aa24.02■■□□□ 1.44
SYNGAP1-227ENST00000638142 SETD1BQ9UPS6 1966 aaKnown RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms