RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 CASTP20810 708 aaKnown RBP17.31■□□□□ 0.36
UBE3A-227ENST00000638011 ARID4AP29374 1257 aaPredicted RBP17.31■□□□□ 0.36
UBE3A-227ENST00000638011 CYLC1P35663 651 aaPredicted RBP17.31■□□□□ 0.36
UBE3A-227ENST00000638011 VAV2P52735 878 aa17.31■□□□□ 0.36
UBE3A-227ENST00000638011 RAPGEF2Q9Y4G8 1499 aa17.31■□□□□ 0.36
UBE3A-227ENST00000638011 LUC7L3O95232 432 aaKnown RBP17.31■□□□□ 0.36
UBE3A-227ENST00000638011 CCDC14Q49A88 953 aa17.31■□□□□ 0.36
UBE3A-227ENST00000638011 ATP2A2P16615 1042 aaKnown RBP17.31■□□□□ 0.36
UBE3A-227ENST00000638011 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.31■□□□□ 0.36
UBE3A-227ENST00000638011 RASSF2P50749 326 aa17.31■□□□□ 0.36
UBE3A-227ENST00000638011 DZIP1Q86YF9 867 aaKnown RBP17.31■□□□□ 0.36
UBE3A-227ENST00000638011 KIF6Q6ZMV9 814 aa17.31■□□□□ 0.36
UBE3A-227ENST00000638011 GNG11P61952 73 aa17.3■□□□□ 0.36
UBE3A-227ENST00000638011 NBPF8Q3BBV2 869 aa17.3■□□□□ 0.36
UBE3A-227ENST00000638011 LTV1Q96GA3 475 aaPredicted RBP17.3■□□□□ 0.36
UBE3A-227ENST00000638011 MYOM3Q5VTT5 1437 aa17.3■□□□□ 0.36
UBE3A-227ENST00000638011 MCM6Q14566 821 aa17.3■□□□□ 0.36
UBE3A-227ENST00000638011 SOGA1O94964 1423 aa17.3■□□□□ 0.36
UBE3A-227ENST00000638011 RMND1Q9NWS8 449 aa17.3■□□□□ 0.36
UBE3A-227ENST00000638011 AKNAQ7Z591 1439 aa17.3■□□□□ 0.36
UBE3A-227ENST00000638011 ATF7IPQ6VMQ6 1270 aa17.3■□□□□ 0.36
UBE3A-227ENST00000638011 ZSCAN16Q9H4T2 348 aaPredicted RBP17.3■□□□□ 0.36
UBE3A-227ENST00000638011 LMBR1Q8WVP7 490 aa17.3■□□□□ 0.36
UBE3A-227ENST00000638011 USP37Q86T82 979 aa17.3■□□□□ 0.36
UBE3A-227ENST00000638011 TRERF1Q96PN7 1200 aa17.3■□□□□ 0.36
UBE3A-227ENST00000638011 NKTRP30414 1462 aaKnown RBP17.3■□□□□ 0.36
UBE3A-227ENST00000638011 PPFIA3O75145 1194 aa17.29■□□□□ 0.36
UBE3A-227ENST00000638011 IBSPP21815 317 aaPredicted RBP17.29■□□□□ 0.36
UBE3A-227ENST00000638011 ZNF165P49910 485 aa17.29■□□□□ 0.36
UBE3A-227ENST00000638011 TTC39AQ5SRH9 613 aa17.29■□□□□ 0.36
UBE3A-227ENST00000638011 SPDYE4A6NLX3 237 aa17.29■□□□□ 0.36
UBE3A-227ENST00000638011 PCK1P35558 622 aa17.29■□□□□ 0.36
UBE3A-227ENST00000638011 MAP2K2P36507 400 aa17.29■□□□□ 0.36
UBE3A-227ENST00000638011 KIF5AQ12840 1032 aa17.29■□□□□ 0.36
UBE3A-227ENST00000638011 NUTM1Q86Y26 1132 aa17.29■□□□□ 0.36
UBE3A-227ENST00000638011 RAB11FIP3O75154 756 aa17.29■□□□□ 0.36
UBE3A-227ENST00000638011 SF3B2Q13435 895 aaKnown RBP17.29■□□□□ 0.36
UBE3A-227ENST00000638011 SPAG1Q07617 926 aa17.29■□□□□ 0.36
UBE3A-227ENST00000638011 CFAP58Q5T655 872 aa17.29■□□□□ 0.36
UBE3A-227ENST00000638011 BCAP29Q9UHQ4 241 aa17.29■□□□□ 0.36
UBE3A-227ENST00000638011 EVA1CP58658 441 aa17.28■□□□□ 0.36
UBE3A-227ENST00000638011 KRT86O43790 486 aa17.28■□□□□ 0.36
UBE3A-227ENST00000638011 VCX3AQ9NNX9 186 aa17.28■□□□□ 0.36
UBE3A-227ENST00000638011 TDRD12Q587J7 1177 aaKnown RBP17.28■□□□□ 0.36
UBE3A-227ENST00000638011 BUB1BO60566 1050 aaPredicted RBP17.28■□□□□ 0.36
UBE3A-227ENST00000638011 GIGYF1O75420 1035 aaPredicted RBP17.28■□□□□ 0.36
UBE3A-227ENST00000638011 A0A087WZG4 1122 aa17.28■□□□□ 0.36
UBE3A-227ENST00000638011 LRCH2Q5VUJ6 765 aa17.27■□□□□ 0.36
UBE3A-227ENST00000638011 TOP2AP11388 1531 aaKnown RBP17.27■□□□□ 0.36
UBE3A-227ENST00000638011 BMP15O95972 392 aa17.27■□□□□ 0.36
UBE3A-227ENST00000638011 ZKSCAN5Q9Y2L8 839 aa17.27■□□□□ 0.36
UBE3A-227ENST00000638011 KRT83P78385 493 aa17.27■□□□□ 0.36
UBE3A-227ENST00000638011 TBC1D5Q92609 795 aa17.27■□□□□ 0.36
UBE3A-227ENST00000638011 NUF2Q9BZD4 464 aa17.27■□□□□ 0.36
UBE3A-227ENST00000638011 COMMD10Q9Y6G5 202 aa17.27■□□□□ 0.36
UBE3A-227ENST00000638011 PRC1O43663 620 aa17.27■□□□□ 0.36
UBE3A-227ENST00000638011 AP1ARQ63HQ0 302 aa17.27■□□□□ 0.36
UBE3A-227ENST00000638011 DNAJC8O75937 253 aaPredicted RBP17.27■□□□□ 0.35
UBE3A-227ENST00000638011 HNRNPMP52272 730 aaKnown RBP eCLIP17.27■□□□□ 0.355e-8■■■■□ 26.4
UBE3A-227ENST00000638011 CNNM3Q8NE01 707 aa17.27■□□□□ 0.35
UBE3A-227ENST00000638011 CLUL1Q15846 466 aa17.27■□□□□ 0.35
UBE3A-227ENST00000638011 CLNS1AP54105 237 aaKnown RBP17.27■□□□□ 0.35
UBE3A-227ENST00000638011 TRPC3Q13507 836 aa17.27■□□□□ 0.35
UBE3A-227ENST00000638011 TPD52P55327 224 aaPredicted RBP17.26■□□□□ 0.35
UBE3A-227ENST00000638011 NOLC1Q14978 699 aaKnown RBP eCLIP17.26■□□□□ 0.35
UBE3A-227ENST00000638011 LRSAM1Q6UWE0 723 aa17.26■□□□□ 0.35
UBE3A-227ENST00000638011 HDAC9Q9UKV0 1011 aa17.26■□□□□ 0.35
UBE3A-227ENST00000638011 MATR3P43243 847 aaKnown RBP eCLIP17.26■□□□□ 0.354e-6■■■■□ 24.9
UBE3A-227ENST00000638011 TMC6Q7Z403 805 aa17.26■□□□□ 0.35
UBE3A-227ENST00000638011 JAKMIP1Q96N16 626 aaKnown RBP17.26■□□□□ 0.35
UBE3A-227ENST00000638011 C8orf76Q96K31 380 aa17.26■□□□□ 0.35
UBE3A-227ENST00000638011 STRN4Q9NRL3 753 aa17.26■□□□□ 0.35
UBE3A-227ENST00000638011 MAP3K21Q5TCX8 1036 aa17.26■□□□□ 0.35
UBE3A-227ENST00000638011 SMC1BQ8NDV3 1235 aa17.26■□□□□ 0.35
UBE3A-227ENST00000638011 THEGQ9P2T0 379 aa17.26■□□□□ 0.35
UBE3A-227ENST00000638011 MACROD2A1Z1Q3 448 aa17.25■□□□□ 0.35
UBE3A-227ENST00000638011 NDC80O14777 642 aa17.25■□□□□ 0.35
UBE3A-227ENST00000638011 MTRF1LQ9UGC7 380 aaKnown RBP17.25■□□□□ 0.35
UBE3A-227ENST00000638011 MGEA5O60502 916 aa17.25■□□□□ 0.35
UBE3A-227ENST00000638011 CAMK4Q16566 473 aa17.25■□□□□ 0.35
UBE3A-227ENST00000638011 PNISRQ8TF01 805 aaKnown RBP17.25■□□□□ 0.35
UBE3A-227ENST00000638011 MTUS1Q9ULD2 1270 aa17.25■□□□□ 0.35
UBE3A-227ENST00000638011 TRIM35Q9UPQ4 493 aa17.25■□□□□ 0.35
UBE3A-227ENST00000638011 TRAK1Q9UPV9 953 aa17.24■□□□□ 0.35
UBE3A-227ENST00000638011 RFC1P35251 1148 aaPredicted RBP17.24■□□□□ 0.35
UBE3A-227ENST00000638011 INTS8Q75QN2 995 aaKnown RBP17.24■□□□□ 0.35
UBE3A-227ENST00000638011 LIMCH1Q9UPQ0 1083 aa17.23■□□□□ 0.35
UBE3A-227ENST00000638011 INPP5BP32019 993 aa17.23■□□□□ 0.35
UBE3A-227ENST00000638011 CCDC96Q2M329 555 aa17.23■□□□□ 0.35
UBE3A-227ENST00000638011 CCDC40Q4G0X9 1142 aa17.23■□□□□ 0.35
UBE3A-227ENST00000638011 TSPYL2Q9H2G4 693 aaPredicted RBP17.23■□□□□ 0.35
UBE3A-227ENST00000638011 FYB2Q5VWT5 728 aa17.23■□□□□ 0.35
UBE3A-227ENST00000638011 GLRX3O76003 335 aaKnown RBP17.23■□□□□ 0.35
UBE3A-227ENST00000638011 SLC8A1P32418 973 aa17.23■□□□□ 0.35
UBE3A-227ENST00000638011 PSMC4P43686 418 aa17.23■□□□□ 0.35
UBE3A-227ENST00000638011 NOP2P46087 812 aaKnown RBP17.23■□□□□ 0.35
UBE3A-227ENST00000638011 NEDD9Q14511 834 aa17.23■□□□□ 0.35
UBE3A-227ENST00000638011 KANK4Q5T7N3 995 aaPredicted RBP17.23■□□□□ 0.35
UBE3A-227ENST00000638011 FAM200AQ8TCP9 573 aa17.23■□□□□ 0.35
UBE3A-227ENST00000638011 TRMT1Q9NXH9 659 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms