RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 CCDC57Q2TAC2 916 aa10.66□□□□□ -0.7
CACNA1A-254ENST00000637952 TPTE2Q6XPS3 522 aa10.66□□□□□ -0.7
CACNA1A-254ENST00000637952 COL3A1P02461 1466 aaPredicted RBP10.66□□□□□ -0.7
CACNA1A-254ENST00000637952 LRP6O75581 1613 aa10.66□□□□□ -0.7
CACNA1A-254ENST00000637952 MVPQ14764 893 aaKnown RBP10.66□□□□□ -0.7
CACNA1A-254ENST00000637952 EZH2Q15910 746 aaKnown RBP10.66□□□□□ -0.7
CACNA1A-254ENST00000637952 CWF19L2Q2TBE0 894 aaKnown RBP10.66□□□□□ -0.7
CACNA1A-254ENST00000637952 SLC27A3Q5K4L6 730 aa10.66□□□□□ -0.7
CACNA1A-254ENST00000637952 C20orf194Q5TEA3 1177 aa10.66□□□□□ -0.7
CACNA1A-254ENST00000637952 WWC3Q9ULE0 1092 aa10.66□□□□□ -0.7
CACNA1A-254ENST00000637952 PLBD2Q8NHP8 589 aa10.66□□□□□ -0.7
CACNA1A-254ENST00000637952 COL16A1Q07092 1604 aaPredicted RBP10.66□□□□□ -0.7
CACNA1A-254ENST00000637952 TNS2Q63HR2 1409 aa10.65□□□□□ -0.7
CACNA1A-254ENST00000637952 ZNF521Q96K83 1311 aa10.65□□□□□ -0.7
CACNA1A-254ENST00000637952 IL6STP40189 918 aaPredicted RBP10.65□□□□□ -0.7
CACNA1A-254ENST00000637952 USPL1Q5W0Q7 1092 aa10.65□□□□□ -0.7
CACNA1A-254ENST00000637952 PTF1AQ7RTS3 328 aa10.65□□□□□ -0.7
CACNA1A-254ENST00000637952 MPHOSPH8Q99549 860 aa10.65□□□□□ -0.7
CACNA1A-254ENST00000637952 NRKQ7Z2Y5 1582 aa10.65□□□□□ -0.7
CACNA1A-254ENST00000637952 DCAF8L1A6NGE4 600 aa10.65□□□□□ -0.7
CACNA1A-254ENST00000637952 SURF6O75683 361 aaKnown RBP10.65□□□□□ -0.7
CACNA1A-254ENST00000637952 CCDC24Q8N4L8 307 aa10.65□□□□□ -0.7
CACNA1A-254ENST00000637952 CNNM1Q9NRU3 951 aa10.65□□□□□ -0.7
CACNA1A-254ENST00000637952 XIRP1Q702N8 1843 aaKnown RBP10.65□□□□□ -0.7
CACNA1A-254ENST00000637952 SMIM5Q71RC9 77 aa10.65□□□□□ -0.7
CACNA1A-254ENST00000637952 SIL1Q9H173 461 aa10.65□□□□□ -0.7
CACNA1A-254ENST00000637952 SRGAP3O43295 1099 aa10.64□□□□□ -0.71
CACNA1A-254ENST00000637952 ST5P78524 1137 aa10.64□□□□□ -0.71
CACNA1A-254ENST00000637952 ANKRD45Q5TZF3 282 aa10.64□□□□□ -0.71
CACNA1A-254ENST00000637952 LINS1Q8NG48 757 aa10.64□□□□□ -0.71
CACNA1A-254ENST00000637952 ZNF219Q9P2Y4 722 aaPredicted RBP10.64□□□□□ -0.71
CACNA1A-254ENST00000637952 ZNF622Q969S3 477 aaKnown RBP eCLIP10.64□□□□□ -0.71
CACNA1A-254ENST00000637952 UTP14AQ9BVJ6 771 aaKnown RBP10.64□□□□□ -0.71
CACNA1A-254ENST00000637952 COL14A1Q05707 1796 aaKnown RBP10.64□□□□□ -0.71
CACNA1A-254ENST00000637952 ARHGAP45Q92619 1136 aa10.64□□□□□ -0.71
CACNA1A-254ENST00000637952 RPGRQ92834 1020 aaKnown RBP10.64□□□□□ -0.71
CACNA1A-254ENST00000637952 TNNQ9UQP3 1299 aa10.64□□□□□ -0.71
CACNA1A-254ENST00000637952 NHSL1Q5SYE7 1610 aa10.64□□□□□ -0.71
CACNA1A-254ENST00000637952 RPS6KA4O75676 772 aa10.63□□□□□ -0.71
CACNA1A-254ENST00000637952 CYP19A1P11511 503 aaPredicted RBP10.63□□□□□ -0.71
CACNA1A-254ENST00000637952 FAM89AQ96GI7 184 aa10.63□□□□□ -0.71
CACNA1A-254ENST00000637952 NLRP3Q96P20 1036 aa10.63□□□□□ -0.71
CACNA1A-254ENST00000637952 ERBB4Q15303 1308 aa10.63□□□□□ -0.71
CACNA1A-254ENST00000637952 VPS37DQ86XT2 251 aa10.63□□□□□ -0.71
CACNA1A-254ENST00000637952 NEUROD6Q96NK8 337 aa10.63□□□□□ -0.71
CACNA1A-254ENST00000637952 PSDA5PKW4 1024 aaPredicted RBP10.63□□□□□ -0.71
CACNA1A-254ENST00000637952 SRP68Q9UHB9 627 aaKnown RBP10.63□□□□□ -0.71
CACNA1A-254ENST00000637952 ATF5Q9Y2D1 282 aaPredicted RBP10.63□□□□□ -0.71
CACNA1A-254ENST00000637952 ITPK1Q13572 414 aa10.62□□□□□ -0.71
CACNA1A-254ENST00000637952 CCDC125Q86Z20 511 aa10.62□□□□□ -0.71
CACNA1A-254ENST00000637952 METTL22Q9BUU2 404 aaPredicted RBP10.62□□□□□ -0.71
CACNA1A-254ENST00000637952 NYXQ9GZU5 481 aa10.62□□□□□ -0.71
CACNA1A-254ENST00000637952 LRRFIP2Q9Y608 721 aaKnown RBP10.62□□□□□ -0.71
CACNA1A-254ENST00000637952 LTN1O94822 1766 aa10.62□□□□□ -0.71
CACNA1A-254ENST00000637952 CEMIPQ8WUJ3 1361 aa10.62□□□□□ -0.71
CACNA1A-254ENST00000637952 NLGN1Q8N2Q7 840 aa10.62□□□□□ -0.71
CACNA1A-254ENST00000637952 CNBD1Q8NA66 436 aa10.62□□□□□ -0.71
CACNA1A-254ENST00000637952 GRM8O00222 908 aa10.62□□□□□ -0.71
CACNA1A-254ENST00000637952 IGHMBP2P38935 993 aaKnown RBP10.62□□□□□ -0.71
CACNA1A-254ENST00000637952 ONECUT3O60422 494 aaPredicted RBP10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 ALDH1L1O75891 902 aa10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 IFIT5Q13325 482 aaKnown RBP10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 ATRNO75882 1429 aa10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 ALS2Q96Q42 1657 aa10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 TCIRG1Q13488 830 aa10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 R3HDM1Q15032 1099 aaKnown RBP10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 HSP90AB4PQ58FF6 505 aa10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 DDX46Q7L014 1031 aaKnown RBP10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 NUTM1Q86Y26 1132 aa10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 TRMT2AQ8IZ69 625 aaKnown RBP10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 MEIS3Q99687 375 aa10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 TRPM3Q9HCF6 1732 aaPredicted RBP10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 KDM6AO15550 1401 aaPredicted RBP10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 HCLS1P14317 486 aaPredicted RBP10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 PARP10Q53GL7 1025 aa10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 LINC00116Q8NCU8 138 aa10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 ARHGEF1Q92888 912 aaKnown RBP10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 FBXW7Q969H0 707 aa10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 MAP3K15Q6ZN16 1313 aa10.61□□□□□ -0.71
CACNA1A-254ENST00000637952 IRS4O14654 1257 aaPredicted RBP10.6□□□□□ -0.71
CACNA1A-254ENST00000637952 RGS17Q9UGC6 210 aaPredicted RBP10.6□□□□□ -0.71
CACNA1A-254ENST00000637952 ZBTB7AO95365 584 aa10.6□□□□□ -0.71
CACNA1A-254ENST00000637952 IFIT2P09913 472 aaKnown RBP10.6□□□□□ -0.71
CACNA1A-254ENST00000637952 GPATCH3Q96I76 525 aa10.6□□□□□ -0.71
CACNA1A-254ENST00000637952 ANKRD26Q9UPS8 1709 aa10.6□□□□□ -0.71
CACNA1A-254ENST00000637952 SH3TC1Q8TE82 1336 aa10.6□□□□□ -0.71
CACNA1A-254ENST00000637952 LMBR1LQ6UX01 489 aa10.59□□□□□ -0.71
CACNA1A-254ENST00000637952 GIGYF2Q6Y7W6 1299 aaKnown RBP10.59□□□□□ -0.71
CACNA1A-254ENST00000637952 CCDC191Q8NCU4 936 aa10.59□□□□□ -0.71
CACNA1A-254ENST00000637952 PEAK1Q9H792 1746 aa10.59□□□□□ -0.71
CACNA1A-254ENST00000637952 ANKRD18BA2A2Z9 1011 aa10.59□□□□□ -0.71
CACNA1A-254ENST00000637952 NBPF26B4DH59 902 aa10.59□□□□□ -0.71
CACNA1A-254ENST00000637952 NBPF10Q6P3W6 841 aaKnown RBP10.59□□□□□ -0.71
CACNA1A-254ENST00000637952 NBPF15Q8N660 670 aa10.59□□□□□ -0.71
CACNA1A-254ENST00000637952 RLBP1P12271 317 aa10.59□□□□□ -0.71
CACNA1A-254ENST00000637952 CEP126Q9P2H0 1117 aa10.59□□□□□ -0.71
CACNA1A-254ENST00000637952 BCL9O00512 1426 aa10.59□□□□□ -0.71
CACNA1A-254ENST00000637952 RPAP2Q8IXW5 612 aaPredicted RBP10.59□□□□□ -0.71
CACNA1A-254ENST00000637952 TRIM6-TRIM34B2RNG4 842 aa10.58□□□□□ -0.72
CACNA1A-254ENST00000637952 PLSCR1O15162 318 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms