RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 ZNF330Q9Y3S2 320 aaPredicted RBP11.77□□□□□ -0.53
CLN8-214ENST00000637594 U2AF1L5P0DN76 240 aaPredicted RBP11.76□□□□□ -0.53
CLN8-214ENST00000637594 PPP2R1AP30153 589 aa11.76□□□□□ -0.53
CLN8-214ENST00000637594 U2AF1Q01081 240 aaKnown RBP eCLIP11.76□□□□□ -0.53
CLN8-214ENST00000637594 TAF7Q15545 349 aaPredicted RBP11.76□□□□□ -0.53
CLN8-214ENST00000637594 PRPF40BQ6NWY9 871 aaKnown RBP11.76□□□□□ -0.53
CLN8-214ENST00000637594 TPTE2Q6XPS3 522 aa11.76□□□□□ -0.53
CLN8-214ENST00000637594 CCDC24Q8N4L8 307 aa11.76□□□□□ -0.53
CLN8-214ENST00000637594 ZNF652Q9Y2D9 606 aa11.76□□□□□ -0.53
CLN8-214ENST00000637594 ANKRD31Q8N7Z5 1873 aa11.75□□□□□ -0.53
CLN8-214ENST00000637594 PRAMEF22A3QJZ6 481 aa11.75□□□□□ -0.53
CLN8-214ENST00000637594 NBPF26B4DH59 902 aa11.75□□□□□ -0.53
CLN8-214ENST00000637594 NPR1P16066 1061 aa11.75□□□□□ -0.53
CLN8-214ENST00000637594 COL13A1Q5TAT6 717 aaPredicted RBP11.75□□□□□ -0.53
CLN8-214ENST00000637594 NBPF10Q6P3W6 841 aaKnown RBP11.75□□□□□ -0.53
CLN8-214ENST00000637594 MCM10Q7L590 875 aa11.75□□□□□ -0.53
CLN8-214ENST00000637594 NBPF5PQ86XG9 351 aaPredicted RBP11.75□□□□□ -0.53
CLN8-214ENST00000637594 NBPF15Q8N660 670 aa11.75□□□□□ -0.53
CLN8-214ENST00000637594 L3MBTL3Q96JM7 780 aaPredicted RBP11.75□□□□□ -0.53
CLN8-214ENST00000637594 CHADLQ6NUI6 762 aa11.74□□□□□ -0.53
CLN8-214ENST00000637594 ZNF219Q9P2Y4 722 aaPredicted RBP11.74□□□□□ -0.53
CLN8-214ENST00000637594 SCN7AQ01118 1682 aa11.74□□□□□ -0.53
CLN8-214ENST00000637594 FER1L6Q2WGJ9 1857 aa11.74□□□□□ -0.53
CLN8-214ENST00000637594 ERVV-1B6SEH8 477 aa11.73□□□□□ -0.53
CLN8-214ENST00000637594 NPHP1O15259 732 aa11.73□□□□□ -0.53
CLN8-214ENST00000637594 DDNO94850 711 aaPredicted RBP11.73□□□□□ -0.53
CLN8-214ENST00000637594 ALDH1B1P30837 517 aa11.73□□□□□ -0.53
CLN8-214ENST00000637594 CNGB1Q14028 1251 aaPredicted RBP11.73□□□□□ -0.53
CLN8-214ENST00000637594 RTKN2Q8IZC4 609 aa11.73□□□□□ -0.53
CLN8-214ENST00000637594 PNISRQ8TF01 805 aaKnown RBP11.73□□□□□ -0.53
CLN8-214ENST00000637594 CREBZFQ9NS37 354 aa11.73□□□□□ -0.53
CLN8-214ENST00000637594 IQCA1LA6NCM1 817 aa11.72□□□□□ -0.53
CLN8-214ENST00000637594 PIP4K2AP48426 406 aaPredicted RBP11.72□□□□□ -0.53
CLN8-214ENST00000637594 FKBP4Q02790 459 aaKnown RBP eCLIP11.72□□□□□ -0.53
CLN8-214ENST00000637594 DCTN1Q14203 1278 aa11.72□□□□□ -0.53
CLN8-214ENST00000637594 CCDC93Q567U6 631 aa11.72□□□□□ -0.53
CLN8-214ENST00000637594 NIP7Q9Y221 180 aaKnown RBP eCLIP11.72□□□□□ -0.53
CLN8-214ENST00000637594 DICER1Q9UPY3 1922 aaKnown RBP11.72□□□□□ -0.53
CLN8-214ENST00000637594 SLX4Q8IY92 1834 aa11.72□□□□□ -0.53
CLN8-214ENST00000637594 HLFQ16534 295 aa11.71□□□□□ -0.53
CLN8-214ENST00000637594 CRY2Q49AN0 593 aa11.71□□□□□ -0.53
CLN8-214ENST00000637594 PLEKHF1Q96S99 279 aa11.71□□□□□ -0.53
CLN8-214ENST00000637594 CCDC88AQ3V6T2 1871 aa11.71□□□□□ -0.53
CLN8-214ENST00000637594 PASKQ96RG2 1323 aa11.7□□□□□ -0.54
CLN8-214ENST00000637594 COL11A2P13942 1736 aaPredicted RBP11.7□□□□□ -0.54
CLN8-214ENST00000637594 FZD9O00144 591 aa11.7□□□□□ -0.54
CLN8-214ENST00000637594 GRIPAP1Q4V328 841 aa11.7□□□□□ -0.54
CLN8-214ENST00000637594 LDHDQ86WU2 507 aa11.7□□□□□ -0.54
CLN8-214ENST00000637594 TAF1DQ9H5J8 278 aaPredicted RBP11.7□□□□□ -0.54
CLN8-214ENST00000637594 BCORQ6W2J9 1755 aa11.69□□□□□ -0.54
CLN8-214ENST00000637594 TIAM2Q8IVF5 1701 aa11.69□□□□□ -0.54
CLN8-214ENST00000637594 ITGBL1O95965 494 aaPredicted RBP11.69□□□□□ -0.54
CLN8-214ENST00000637594 POTEIP0CG38 1075 aa11.69□□□□□ -0.54
CLN8-214ENST00000637594 POTEJP0CG39 1038 aa11.69□□□□□ -0.54
CLN8-214ENST00000637594 HSPA1AP0DMV8 641 aaKnown RBP11.69□□□□□ -0.54
CLN8-214ENST00000637594 HSPA1BP0DMV9 641 aaKnown RBP11.69□□□□□ -0.54
CLN8-214ENST00000637594 HOXA10P31260 410 aaPredicted RBP11.69□□□□□ -0.54
CLN8-214ENST00000637594 EIF4A1P60842 406 aaKnown RBP11.69□□□□□ -0.54
CLN8-214ENST00000637594 CC2D2BQ6DHV5 1058 aa11.69□□□□□ -0.54
CLN8-214ENST00000637594 PSMD1Q99460 953 aa11.69□□□□□ -0.54
CLN8-214ENST00000637594 NYXQ9GZU5 481 aa11.69□□□□□ -0.54
CLN8-214ENST00000637594 MIS18AQ9NYP9 233 aa11.69□□□□□ -0.54
CLN8-214ENST00000637594 PCNTO95613 3336 aa11.69□□□□□ -0.54
CLN8-214ENST00000637594 TNS4Q8IZW8 715 aa11.68□□□□□ -0.54
CLN8-214ENST00000637594 SYNE4Q8N205 404 aa11.68□□□□□ -0.54
CLN8-214ENST00000637594 PNNQ9H307 717 aaKnown RBP11.68□□□□□ -0.54
CLN8-214ENST00000637594 ZNF277Q9NRM2 450 aaPredicted RBP11.68□□□□□ -0.54
CLN8-214ENST00000637594 ARFGEF2Q9Y6D5 1785 aa11.67□□□□□ -0.54
CLN8-214ENST00000637594 MAP3K15Q6ZN16 1313 aa11.67□□□□□ -0.54
CLN8-214ENST00000637594 NEFMP07197 916 aa11.67□□□□□ -0.54
CLN8-214ENST00000637594 GTF2E1P29083 439 aaPredicted RBP11.67□□□□□ -0.54
CLN8-214ENST00000637594 IARSP41252 1262 aaKnown RBP11.67□□□□□ -0.54
CLN8-214ENST00000637594 PNMA8AQ86V59 439 aaPredicted RBP11.67□□□□□ -0.54
CLN8-214ENST00000637594 HACL1Q9UJ83 578 aa11.67□□□□□ -0.54
CLN8-214ENST00000637594 SNED1Q8TER0 1413 aa11.67□□□□□ -0.54
CLN8-214ENST00000637594 NFE2L2Q16236 605 aa11.66□□□□□ -0.54
CLN8-214ENST00000637594 OLFM4Q6UX06 510 aa11.66□□□□□ -0.54
CLN8-214ENST00000637594 ZNF34Q8IZ26 560 aa11.66□□□□□ -0.54
CLN8-214ENST00000637594 GPC2Q8N158 579 aa11.66□□□□□ -0.54
CLN8-214ENST00000637594 CRAMP1Q96RY5 1269 aa11.66□□□□□ -0.54
CLN8-214ENST00000637594 BABAM1Q9NWV8 329 aa11.66□□□□□ -0.54
CLN8-214ENST00000637594 RIC1Q4ADV7 1423 aa11.66□□□□□ -0.54
CLN8-214ENST00000637594 IBTKQ9P2D0 1353 aaPredicted RBP11.66□□□□□ -0.54
CLN8-214ENST00000637594 SCN4AP35499 1836 aa11.65□□□□□ -0.54
CLN8-214ENST00000637594 ERBB4Q15303 1308 aa11.65□□□□□ -0.54
CLN8-214ENST00000637594 ZNF541Q9H0D2 1346 aa11.65□□□□□ -0.54
CLN8-214ENST00000637594 TMEM88BA6NKF7 163 aa11.65□□□□□ -0.54
CLN8-214ENST00000637594 EPHX2P34913 555 aa11.65□□□□□ -0.54
CLN8-214ENST00000637594 SLC10A5Q5PT55 438 aa11.65□□□□□ -0.54
CLN8-214ENST00000637594 GIGYF2Q6Y7W6 1299 aaKnown RBP11.65□□□□□ -0.54
CLN8-214ENST00000637594 VPS33BQ9H267 617 aa11.65□□□□□ -0.54
CLN8-214ENST00000637594 CNTNAP1P78357 1384 aa11.65□□□□□ -0.55
CLN8-214ENST00000637594 FAM177BA6PVY3 158 aa11.64□□□□□ -0.55
CLN8-214ENST00000637594 SUSD4Q5VX71 490 aa11.64□□□□□ -0.55
CLN8-214ENST00000637594 KIF6Q6ZMV9 814 aa11.64□□□□□ -0.55
CLN8-214ENST00000637594 TTLL7Q6ZT98 887 aa11.64□□□□□ -0.55
CLN8-214ENST00000637594 LRP10Q7Z4F1 713 aa11.64□□□□□ -0.55
CLN8-214ENST00000637594 NUTM1Q86Y26 1132 aa11.64□□□□□ -0.55
CLN8-214ENST00000637594 JDP2Q8WYK2 163 aa11.64□□□□□ -0.55
CLN8-214ENST00000637594 MKRN1Q9UHC7 482 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms