RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 MRPL50Q8N5N7 158 aaKnown RBP7.56□□□□□ -1.2
SCN2A-216ENST00000637367 ZBTB3Q9H5J0 574 aa7.56□□□□□ -1.2
SCN2A-216ENST00000637367 PRDM11Q9NQV5 511 aa7.56□□□□□ -1.2
SCN2A-216ENST00000637367 IQGAP2Q13576 1575 aa7.56□□□□□ -1.2
SCN2A-216ENST00000637367 WASLO00401 505 aaPredicted RBP7.56□□□□□ -1.2
SCN2A-216ENST00000637367 VAMP4O75379 141 aa7.56□□□□□ -1.2
SCN2A-216ENST00000637367 SKILP12757 684 aa7.56□□□□□ -1.2
SCN2A-216ENST00000637367 CEP135Q66GS9 1140 aa7.56□□□□□ -1.2
SCN2A-216ENST00000637367 PLEKHM2Q8IWE5 1019 aa7.56□□□□□ -1.2
SCN2A-216ENST00000637367 CNNM3Q8NE01 707 aa7.56□□□□□ -1.2
SCN2A-216ENST00000637367 TSC1Q92574 1164 aa7.56□□□□□ -1.2
SCN2A-216ENST00000637367 CHAMP1Q96JM3 812 aa7.56□□□□□ -1.2
SCN2A-216ENST00000637367 CRACR2AQ9BSW2 395 aa7.56□□□□□ -1.2
SCN2A-216ENST00000637367 ORC3Q9UBD5 711 aaPredicted RBP7.56□□□□□ -1.2
SCN2A-216ENST00000637367 USP16Q9Y5T5 823 aa7.56□□□□□ -1.2
SCN2A-216ENST00000637367 KAT6BQ8WYB5 2073 aa7.56□□□□□ -1.2
SCN2A-216ENST00000637367 PTPRCP08575 1304 aa7.56□□□□□ -1.2
SCN2A-216ENST00000637367 PTGS1P23219 599 aa7.56□□□□□ -1.2
SCN2A-216ENST00000637367 GNG11P61952 73 aa7.56□□□□□ -1.2
SCN2A-216ENST00000637367 C14orf93Q9H972 538 aaKnown RBP7.56□□□□□ -1.2
SCN2A-216ENST00000637367 NOL7Q9UMY1 257 aaKnown RBP7.56□□□□□ -1.2
SCN2A-216ENST00000637367 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.56□□□□□ -1.2
SCN2A-216ENST00000637367 JAKMIP3Q5VZ66 844 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 BICDL1Q6ZP65 573 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 RBM8AQ9Y5S9 174 aaKnown RBP7.55□□□□□ -1.2
SCN2A-216ENST00000637367 KDM2BQ8NHM5 1336 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 KIF2AO00139 706 aaPredicted RBP7.55□□□□□ -1.2
SCN2A-216ENST00000637367 ZSCAN12O43309 604 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 LIG1P18858 919 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 CCDC191Q8NCU4 936 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 PRIMPOLQ96LW4 560 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 NEK1Q96PY6 1258 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 DBF4Q9UBU7 674 aaPredicted RBP7.55□□□□□ -1.2
SCN2A-216ENST00000637367 GOLGA6L10A6NI86 522 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 GPTP24298 496 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 CHST3Q7LGC8 479 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 FAM200AQ8TCP9 573 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 EVI5LQ96CN4 794 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 NAPBQ9H115 298 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 SEPT11Q9NVA2 429 aaKnown RBP7.55□□□□□ -1.2
SCN2A-216ENST00000637367 DNAI1Q9UI46 699 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 KIF5CO60282 957 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 LMOD1P29536 600 aaPredicted RBP7.55□□□□□ -1.2
SCN2A-216ENST00000637367 CASQ1P31415 396 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 LMAN1P49257 510 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 STX1AQ16623 288 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 LUZP1Q86V48 1076 aa7.55□□□□□ -1.2
SCN2A-216ENST00000637367 ZNF213O14771 459 aa7.54□□□□□ -1.2
SCN2A-216ENST00000637367 F13A1P00488 732 aa7.54□□□□□ -1.2
SCN2A-216ENST00000637367 AK2P54819 239 aa7.54□□□□□ -1.2
SCN2A-216ENST00000637367 DNMBPQ6XZF7 1577 aa7.54□□□□□ -1.2
SCN2A-216ENST00000637367 RALGAPBQ86X10 1494 aa7.54□□□□□ -1.2
SCN2A-216ENST00000637367 USP5P45974 858 aa7.54□□□□□ -1.2
SCN2A-216ENST00000637367 CEP85Q6P2H3 762 aa7.54□□□□□ -1.2
SCN2A-216ENST00000637367 DCTPP1Q9H773 170 aa7.54□□□□□ -1.2
SCN2A-216ENST00000637367 CHPF2Q9P2E5 772 aa7.54□□□□□ -1.2
SCN2A-216ENST00000637367 POLKQ9UBT6 870 aa7.54□□□□□ -1.2
SCN2A-216ENST00000637367 IL16Q14005 1332 aa7.54□□□□□ -1.2
SCN2A-216ENST00000637367 IFIT3O14879 490 aaKnown RBP7.54□□□□□ -1.2
SCN2A-216ENST00000637367 RANBP6O60518 1105 aaKnown RBP7.54□□□□□ -1.2
SCN2A-216ENST00000637367 MARCKSP29966 332 aaPredicted RBP7.54□□□□□ -1.2
SCN2A-216ENST00000637367 SLC4A8Q2Y0W8 1093 aa7.54□□□□□ -1.2
SCN2A-216ENST00000637367 UVSSAQ2YD98 709 aa7.54□□□□□ -1.2
SCN2A-216ENST00000637367 ZSCAN25Q6NSZ9 544 aa7.54□□□□□ -1.2
SCN2A-216ENST00000637367 AOPEPQ8N6M6 819 aa7.54□□□□□ -1.2
SCN2A-216ENST00000637367 ARHGAP45Q92619 1136 aa7.54□□□□□ -1.2
SCN2A-216ENST00000637367 PRAG1Q86YV5 1406 aa7.54□□□□□ -1.2
SCN2A-216ENST00000637367 NEFHP12036 1026 aa7.53□□□□□ -1.2
SCN2A-216ENST00000637367 CEBPAP49715 358 aaPredicted RBP7.53□□□□□ -1.2
SCN2A-216ENST00000637367 THEMISQ8N1K5 641 aaPredicted RBP7.53□□□□□ -1.2
SCN2A-216ENST00000637367 CCDC12Q8WUD4 166 aaPredicted RBP7.53□□□□□ -1.2
SCN2A-216ENST00000637367 USP26Q9BXU7 913 aa7.53□□□□□ -1.2
SCN2A-216ENST00000637367 GNL3LQ9NVN8 582 aaKnown RBP7.53□□□□□ -1.2
SCN2A-216ENST00000637367 NCKAP5LQ9HCH0 1330 aa7.53□□□□□ -1.2
SCN2A-216ENST00000637367 GPATCH8Q9UKJ3 1502 aaKnown RBP7.53□□□□□ -1.2
SCN2A-216ENST00000637367 CTAGE5O15320 804 aa7.53□□□□□ -1.2
SCN2A-216ENST00000637367 MATR3P43243 847 aaKnown RBP eCLIP7.53□□□□□ -1.2
SCN2A-216ENST00000637367 TYRO3Q06418 890 aa7.53□□□□□ -1.2
SCN2A-216ENST00000637367 MCM6Q14566 821 aa7.53□□□□□ -1.2
SCN2A-216ENST00000637367 SOGA3Q5TF21 947 aa7.53□□□□□ -1.2
SCN2A-216ENST00000637367 NUP88Q99567 741 aaPredicted RBP7.53□□□□□ -1.2
SCN2A-216ENST00000637367 ASXL1Q8IXJ9 1541 aa7.53□□□□□ -1.2
SCN2A-216ENST00000637367 GOLGA8AA7E2F4 631 aa7.53□□□□□ -1.2
SCN2A-216ENST00000637367 PDIA4P13667 645 aaKnown RBP7.53□□□□□ -1.2
SCN2A-216ENST00000637367 SYT1P21579 422 aa7.53□□□□□ -1.2
SCN2A-216ENST00000637367 SLC39A6Q13433 755 aa7.53□□□□□ -1.2
SCN2A-216ENST00000637367 G2E3Q7L622 706 aa7.53□□□□□ -1.2
SCN2A-216ENST00000637367 RNF123Q5XPI4 1314 aa7.52□□□□□ -1.2
SCN2A-216ENST00000637367 IFT140Q96RY7 1462 aa7.52□□□□□ -1.2
SCN2A-216ENST00000637367 MRC2Q9UBG0 1479 aa7.52□□□□□ -1.2
SCN2A-216ENST00000637367 SLC12A7Q9Y666 1083 aa7.52□□□□□ -1.21
SCN2A-216ENST00000637367 ACEP12821 1306 aa7.52□□□□□ -1.21
SCN2A-216ENST00000637367 KLF18A0A0U1RQI7 1052 aa7.52□□□□□ -1.21
SCN2A-216ENST00000637367 GSDMDP57764 484 aa7.52□□□□□ -1.21
SCN2A-216ENST00000637367 ZBTB7BO15156 539 aaPredicted RBP7.52□□□□□ -1.21
SCN2A-216ENST00000637367 IARSP41252 1262 aaKnown RBP7.52□□□□□ -1.21
SCN2A-216ENST00000637367 UBASH3AP57075 661 aa7.52□□□□□ -1.21
SCN2A-216ENST00000637367 SYCP1Q15431 976 aa7.52□□□□□ -1.21
SCN2A-216ENST00000637367 KRT222Q8N1A0 295 aa7.52□□□□□ -1.21
SCN2A-216ENST00000637367 CCDC148Q8NFR7 591 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms