RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 PLBD2Q8NHP8 589 aa19.26■□□□□ 0.67
CLN6-219ENST00000637329 SLC4A9Q96Q91 983 aa19.26■□□□□ 0.67
CLN6-219ENST00000637329 LY75O60449 1722 aa19.25■□□□□ 0.67
CLN6-219ENST00000637329 LOC102724428A0A0B4J2F2 783 aa19.25■□□□□ 0.67
CLN6-219ENST00000637329 GNAI2P04899 355 aa19.25■□□□□ 0.67
CLN6-219ENST00000637329 SIK1P57059 783 aa19.25■□□□□ 0.67
CLN6-219ENST00000637329 AIMP1Q12904 312 aaKnown RBP19.25■□□□□ 0.67
CLN6-219ENST00000637329 ANKRD13DQ6ZTN6 518 aa19.25■□□□□ 0.67
CLN6-219ENST00000637329 RIC3Q7Z5B4 369 aa19.25■□□□□ 0.67
CLN6-219ENST00000637329 ANKRD44Q8N8A2 993 aa19.25■□□□□ 0.67
CLN6-219ENST00000637329 HDAC5Q9UQL6 1122 aa19.25■□□□□ 0.67
CLN6-219ENST00000637329 A1BGP04217 495 aa19.24■□□□□ 0.67
CLN6-219ENST00000637329 EZH2Q15910 746 aaKnown RBP19.24■□□□□ 0.67
CLN6-219ENST00000637329 IFFO2Q5TF58 517 aa19.24■□□□□ 0.67
CLN6-219ENST00000637329 METTL22Q9BUU2 404 aaPredicted RBP19.24■□□□□ 0.67
CLN6-219ENST00000637329 KCNQ2O43526 872 aa19.23■□□□□ 0.67
CLN6-219ENST00000637329 UBTFL1P0CB47 393 aaPredicted RBP19.23■□□□□ 0.67
CLN6-219ENST00000637329 CEP85Q6P2H3 762 aa19.23■□□□□ 0.67
CLN6-219ENST00000637329 SMC5Q8IY18 1101 aa19.23■□□□□ 0.67
CLN6-219ENST00000637329 USP44Q9H0E7 712 aa19.23■□□□□ 0.67
CLN6-219ENST00000637329 C1orf115Q9H7X2 142 aa19.23■□□□□ 0.67
CLN6-219ENST00000637329 AFDNP55196 1824 aaKnown RBP19.23■□□□□ 0.67
CLN6-219ENST00000637329 UTYO14607 1347 aa19.23■□□□□ 0.67
CLN6-219ENST00000637329 HMMRO75330 724 aa19.22■□□□□ 0.67
CLN6-219ENST00000637329 GCC1Q96CN9 775 aa19.22■□□□□ 0.67
CLN6-219ENST00000637329 ATP6V1AP38606 617 aa19.21■□□□□ 0.67
CLN6-219ENST00000637329 IL6STP40189 918 aaPredicted RBP19.21■□□□□ 0.67
CLN6-219ENST00000637329 PIP4K2AP48426 406 aaPredicted RBP19.21■□□□□ 0.67
CLN6-219ENST00000637329 ANKRD36CQ5JPF3 1778 aa19.21■□□□□ 0.67
CLN6-219ENST00000637329 COL15A1P39059 1388 aa19.2■□□□□ 0.66
CLN6-219ENST00000637329 KIF6Q6ZMV9 814 aa19.2■□□□□ 0.66
CLN6-219ENST00000637329 FAM196AQ6ZSG2 479 aa19.2■□□□□ 0.66
CLN6-219ENST00000637329 SPON1Q9HCB6 807 aa19.2■□□□□ 0.66
CLN6-219ENST00000637329 CCDC87Q9NVE4 849 aa19.2■□□□□ 0.66
CLN6-219ENST00000637329 KAT6BQ8WYB5 2073 aa19.2■□□□□ 0.66
CLN6-219ENST00000637329 NEURL1BA8MQ27 555 aa19.19■□□□□ 0.66
CLN6-219ENST00000637329 SIRT2Q8IXJ6 389 aa19.19■□□□□ 0.66
CLN6-219ENST00000637329 BCL11BQ9C0K0 894 aaPredicted RBP19.19■□□□□ 0.66
CLN6-219ENST00000637329 ZBTB1Q9Y2K1 713 aa19.19■□□□□ 0.66
CLN6-219ENST00000637329 GRM8O00222 908 aa19.18■□□□□ 0.66
CLN6-219ENST00000637329 APBA3O96018 575 aa19.18■□□□□ 0.66
CLN6-219ENST00000637329 IGKV5-2P06315 115 aa19.18■□□□□ 0.66
CLN6-219ENST00000637329 MYD88Q99836 296 aa19.18■□□□□ 0.66
CLN6-219ENST00000637329 CNTNAP4Q9C0A0 1308 aa19.18■□□□□ 0.66
CLN6-219ENST00000637329 BCORQ6W2J9 1755 aa19.17■□□□□ 0.66
CLN6-219ENST00000637329 CRKLP46109 303 aaKnown RBP19.17■□□□□ 0.66
CLN6-219ENST00000637329 ITPK1Q13572 414 aa19.17■□□□□ 0.66
CLN6-219ENST00000637329 CWF19L2Q2TBE0 894 aaKnown RBP19.17■□□□□ 0.66
CLN6-219ENST00000637329 FAM182BQ5T319 152 aa19.17■□□□□ 0.66
CLN6-219ENST00000637329 TTLL7Q6ZT98 887 aa19.17■□□□□ 0.66
CLN6-219ENST00000637329 CAMKK2Q96RR4 588 aa19.17■□□□□ 0.66
CLN6-219ENST00000637329 C9orf78Q9NZ63 289 aaPredicted RBP19.17■□□□□ 0.66
CLN6-219ENST00000637329 LRRFIP2Q9Y608 721 aaKnown RBP19.17■□□□□ 0.66
CLN6-219ENST00000637329 MAP3K15Q6ZN16 1313 aa19.17■□□□□ 0.66
CLN6-219ENST00000637329 GCKRQ14397 625 aa19.16■□□□□ 0.66
CLN6-219ENST00000637329 TAF1LQ8IZX4 1826 aa19.16■□□□□ 0.66
CLN6-219ENST00000637329 SCN7AQ01118 1682 aa19.15■□□□□ 0.66
CLN6-219ENST00000637329 TRIM37O94972 964 aa19.15■□□□□ 0.66
CLN6-219ENST00000637329 NBPF7P0C2Y1 421 aaPredicted RBP19.15■□□□□ 0.66
CLN6-219ENST00000637329 MTX1Q13505 466 aa19.15■□□□□ 0.66
CLN6-219ENST00000637329 HSP90AB3PQ58FF7 597 aa19.15■□□□□ 0.66
CLN6-219ENST00000637329 INTS5Q6P9B9 1019 aaKnown RBP19.15■□□□□ 0.66
CLN6-219ENST00000637329 NPM2Q86SE8 214 aaKnown RBP19.15■□□□□ 0.66
CLN6-219ENST00000637329 ERVV-1B6SEH8 477 aa19.14■□□□□ 0.65
CLN6-219ENST00000637329 RGL2O15211 777 aa19.14■□□□□ 0.65
CLN6-219ENST00000637329 EIF5P55010 431 aaKnown RBP19.14■□□□□ 0.65
CLN6-219ENST00000637329 CCDC191Q8NCU4 936 aa19.14■□□□□ 0.65
CLN6-219ENST00000637329 DCTPP1Q9H773 170 aa19.14■□□□□ 0.65
CLN6-219ENST00000637329 PDZRN3Q9UPQ7 1066 aa19.14■□□□□ 0.65
CLN6-219ENST00000637329 HMGB2P26583 209 aaKnown RBP19.13■□□□□ 0.65
CLN6-219ENST00000637329 ATP8B2P98198 1209 aa19.13■□□□□ 0.65
CLN6-219ENST00000637329 NUCB1Q02818 461 aa19.13■□□□□ 0.65
CLN6-219ENST00000637329 TRIM28Q13263 835 aaKnown RBP19.13■□□□□ 0.65
CLN6-219ENST00000637329 RC3H1Q5TC82 1133 aaKnown RBP19.13■□□□□ 0.65
CLN6-219ENST00000637329 ZBTB3Q9H5J0 574 aa19.13■□□□□ 0.65
CLN6-219ENST00000637329 RGPD3A6NKT7 1758 aaPredicted RBP19.13■□□□□ 0.65
CLN6-219ENST00000637329 RGPD4Q7Z3J3 1758 aa19.13■□□□□ 0.65
CLN6-219ENST00000637329 MYH14Q7Z406 1995 aaKnown RBP19.12■□□□□ 0.65
CLN6-219ENST00000637329 C4BP0C0L5 1744 aa19.12■□□□□ 0.65
CLN6-219ENST00000637329 GIGYF2Q6Y7W6 1299 aaKnown RBP19.12■□□□□ 0.65
CLN6-219ENST00000637329 SSH3Q8TE77 659 aa19.12■□□□□ 0.65
CLN6-219ENST00000637329 ISCA1Q9BUE6 129 aa19.12■□□□□ 0.65
CLN6-219ENST00000637329 CWC25Q9NXE8 425 aaPredicted RBP19.12■□□□□ 0.65
CLN6-219ENST00000637329 ZNF330Q9Y3S2 320 aaPredicted RBP19.12■□□□□ 0.65
CLN6-219ENST00000637329 TCIRG1Q13488 830 aa19.11■□□□□ 0.65
CLN6-219ENST00000637329 PTF1AQ7RTS3 328 aa19.11■□□□□ 0.65
CLN6-219ENST00000637329 DZIP3Q86Y13 1208 aaKnown RBP19.11■□□□□ 0.65
CLN6-219ENST00000637329 LINC00116Q8NCU8 138 aa19.11■□□□□ 0.65
CLN6-219ENST00000637329 CCNL1Q9UK58 526 aaPredicted RBP19.11■□□□□ 0.65
CLN6-219ENST00000637329 A0A087WZG4 1122 aa19.1■□□□□ 0.65
CLN6-219ENST00000637329 POLA2Q14181 598 aa19.1■□□□□ 0.65
CLN6-219ENST00000637329 CHD1LQ86WJ1 897 aa19.1■□□□□ 0.65
CLN6-219ENST00000637329 ZNF784Q8NCA9 323 aaPredicted RBP19.1■□□□□ 0.65
CLN6-219ENST00000637329 NUP98P52948 1817 aa19.09■□□□□ 0.65
CLN6-219ENST00000637329 TNS1Q9HBL0 1735 aaKnown RBP19.08■□□□□ 0.65
CLN6-219ENST00000637329 PNMA6EA0A0J9YXQ4 647 aa19.08■□□□□ 0.64
CLN6-219ENST00000637329 ATP5J2-PTCD1G3V325 749 aa19.08■□□□□ 0.64
CLN6-219ENST00000637329 SLC27A3Q5K4L6 730 aa19.08■□□□□ 0.64
CLN6-219ENST00000637329 SUCLG2Q96I99 432 aa19.08■□□□□ 0.64
CLN6-219ENST00000637329 H7C1W4 665 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms