RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 BEND3Q5T5X7 828 aa16.92■□□□□ 0.3
LINC00643-207ENST00000637212 TTLL7Q6ZT98 887 aa16.92■□□□□ 0.3
LINC00643-207ENST00000637212 LINS1Q8NG48 757 aa16.92■□□□□ 0.3
LINC00643-207ENST00000637212 SRCIN1Q9C0H9 1055 aa16.92■□□□□ 0.3
LINC00643-207ENST00000637212 KAT6BQ8WYB5 2073 aa16.92■□□□□ 0.3
LINC00643-207ENST00000637212 IBTKQ9P2D0 1353 aaPredicted RBP16.91■□□□□ 0.3
LINC00643-207ENST00000637212 PPP4R2Q9NY27 417 aa16.91■□□□□ 0.3
LINC00643-207ENST00000637212 CICQ96RK0 1608 aaPredicted RBP16.91■□□□□ 0.3
LINC00643-207ENST00000637212 BTAF1O14981 1849 aa16.91■□□□□ 0.3
LINC00643-207ENST00000637212 SBF2Q86WG5 1849 aa16.91■□□□□ 0.3
LINC00643-207ENST00000637212 C5P01031 1676 aa16.91■□□□□ 0.3
LINC00643-207ENST00000637212 DZIP3Q86Y13 1208 aaKnown RBP16.9■□□□□ 0.3
LINC00643-207ENST00000637212 CAMKK2Q96RR4 588 aa16.9■□□□□ 0.3
LINC00643-207ENST00000637212 ZBTB40Q9NUA8 1239 aa16.9■□□□□ 0.3
LINC00643-207ENST00000637212 RTCBQ9Y3I0 505 aaKnown RBP16.9■□□□□ 0.3
LINC00643-207ENST00000637212 MAP3K15Q6ZN16 1313 aa16.9■□□□□ 0.3
LINC00643-207ENST00000637212 ATP10DQ9P241 1426 aa16.89■□□□□ 0.29
LINC00643-207ENST00000637212 MSH5O43196 834 aa16.89■□□□□ 0.29
LINC00643-207ENST00000637212 ADRA2BP18089 450 aa16.89■□□□□ 0.29
LINC00643-207ENST00000637212 TRIM28Q13263 835 aaKnown RBP16.89■□□□□ 0.29
LINC00643-207ENST00000637212 HSP90AB3PQ58FF7 597 aa16.89■□□□□ 0.29
LINC00643-207ENST00000637212 AK7Q96M32 723 aa16.89■□□□□ 0.29
LINC00643-207ENST00000637212 ZNF330Q9Y3S2 320 aaPredicted RBP16.89■□□□□ 0.29
LINC00643-207ENST00000637212 PXDNLA1KZ92 1463 aa16.88■□□□□ 0.29
LINC00643-207ENST00000637212 LAMB4A4D0S4 1761 aa16.88■□□□□ 0.29
LINC00643-207ENST00000637212 BAG6P46379 1132 aa16.88■□□□□ 0.29
LINC00643-207ENST00000637212 TCIRG1Q13488 830 aa16.88■□□□□ 0.29
LINC00643-207ENST00000637212 GIGYF2Q6Y7W6 1299 aaKnown RBP16.88■□□□□ 0.29
LINC00643-207ENST00000637212 PIAS4Q8N2W9 510 aaPredicted RBP16.88■□□□□ 0.29
LINC00643-207ENST00000637212 HDAC5Q9UQL6 1122 aa16.88■□□□□ 0.29
LINC00643-207ENST00000637212 CACNA1FO60840 1977 aa16.88■□□□□ 0.29
LINC00643-207ENST00000637212 GNPATO15228 680 aa16.87■□□□□ 0.29
LINC00643-207ENST00000637212 GNAI3P08754 354 aa16.87■□□□□ 0.29
LINC00643-207ENST00000637212 TRAPPC3LQ5T215 181 aa16.87■□□□□ 0.29
LINC00643-207ENST00000637212 CLEC4GQ6UXB4 293 aa16.87■□□□□ 0.29
LINC00643-207ENST00000637212 ARXQ96QS3 562 aa16.87■□□□□ 0.29
LINC00643-207ENST00000637212 ZBTB3Q9H5J0 574 aa16.87■□□□□ 0.29
LINC00643-207ENST00000637212 TBC1D2BQ9UPU7 963 aa16.87■□□□□ 0.29
LINC00643-207ENST00000637212 TJP1Q07157 1748 aa16.87■□□□□ 0.29
LINC00643-207ENST00000637212 IGKV5-2P06315 115 aa16.86■□□□□ 0.29
LINC00643-207ENST00000637212 CCDC191Q8NCU4 936 aa16.86■□□□□ 0.29
LINC00643-207ENST00000637212 MYD88Q99836 296 aa16.86■□□□□ 0.29
LINC00643-207ENST00000637212 USP44Q9H0E7 712 aa16.86■□□□□ 0.29
LINC00643-207ENST00000637212 NEURL1BA8MQ27 555 aa16.85■□□□□ 0.29
LINC00643-207ENST00000637212 CAMTA2O94983 1202 aa16.85■□□□□ 0.29
LINC00643-207ENST00000637212 SSFA2P28290 1259 aa16.85■□□□□ 0.29
LINC00643-207ENST00000637212 EN1Q05925 392 aaPredicted RBP16.85■□□□□ 0.29
LINC00643-207ENST00000637212 ARHGEF1Q92888 912 aaKnown RBP16.85■□□□□ 0.29
LINC00643-207ENST00000637212 AKT1S1Q96B36 256 aa16.85■□□□□ 0.29
LINC00643-207ENST00000637212 ISCA1Q9BUE6 129 aa16.85■□□□□ 0.29
LINC00643-207ENST00000637212 NARFQ9UHQ1 456 aa16.85■□□□□ 0.29
LINC00643-207ENST00000637212 LY75O60449 1722 aa16.84■□□□□ 0.29
LINC00643-207ENST00000637212 GCKRQ14397 625 aa16.84■□□□□ 0.29
LINC00643-207ENST00000637212 HLFQ16534 295 aa16.84■□□□□ 0.29
LINC00643-207ENST00000637212 FLAD1Q8NFF5 587 aa16.84■□□□□ 0.29
LINC00643-207ENST00000637212 ZNF652Q9Y2D9 606 aa16.84■□□□□ 0.29
LINC00643-207ENST00000637212 COL15A1P39059 1388 aa16.84■□□□□ 0.29
LINC00643-207ENST00000637212 UTYO14607 1347 aa16.83■□□□□ 0.28
LINC00643-207ENST00000637212 ZPR1O75312 459 aa16.83■□□□□ 0.28
LINC00643-207ENST00000637212 RFC4P35249 363 aa16.83■□□□□ 0.28
LINC00643-207ENST00000637212 EZH2Q15910 746 aaKnown RBP16.83■□□□□ 0.28
LINC00643-207ENST00000637212 CWC25Q9NXE8 425 aaPredicted RBP16.83■□□□□ 0.28
LINC00643-207ENST00000637212 C9orf78Q9NZ63 289 aaPredicted RBP16.83■□□□□ 0.28
LINC00643-207ENST00000637212 RREB1Q92766 1687 aa16.82■□□□□ 0.28
LINC00643-207ENST00000637212 GNAI2P04899 355 aa16.82■□□□□ 0.28
LINC00643-207ENST00000637212 CWF19L2Q2TBE0 894 aaKnown RBP16.82■□□□□ 0.28
LINC00643-207ENST00000637212 ZNF34Q8IZ26 560 aa16.82■□□□□ 0.28
LINC00643-207ENST00000637212 MEIS3Q99687 375 aa16.82■□□□□ 0.28
LINC00643-207ENST00000637212 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.81■□□□□ 0.28
LINC00643-207ENST00000637212 ATP5J2-PTCD1G3V325 749 aa16.81■□□□□ 0.28
LINC00643-207ENST00000637212 H7C1W4 665 aa16.81■□□□□ 0.28
LINC00643-207ENST00000637212 GRM8O00222 908 aa16.81■□□□□ 0.28
LINC00643-207ENST00000637212 UBTFL1P0CB47 393 aaPredicted RBP16.81■□□□□ 0.28
LINC00643-207ENST00000637212 PARP10Q53GL7 1025 aa16.81■□□□□ 0.28
LINC00643-207ENST00000637212 RPAP2Q8IXW5 612 aaPredicted RBP16.81■□□□□ 0.28
LINC00643-207ENST00000637212 TFCP2L1Q9NZI6 479 aa16.81■□□□□ 0.28
LINC00643-207ENST00000637212 CCDC136Q96JN2 1154 aa16.8■□□□□ 0.28
LINC00643-207ENST00000637212 PCDHB15Q9Y5E8 787 aa16.8■□□□□ 0.28
LINC00643-207ENST00000637212 NBPF7P0C2Y1 421 aaPredicted RBP16.79■□□□□ 0.28
LINC00643-207ENST00000637212 USPL1Q5W0Q7 1092 aa16.79■□□□□ 0.28
LINC00643-207ENST00000637212 NLRP10Q86W26 655 aa16.79■□□□□ 0.28
LINC00643-207ENST00000637212 AMIGO3Q86WK7 504 aa16.79■□□□□ 0.28
LINC00643-207ENST00000637212 RWDD1Q9H446 243 aaPredicted RBP16.79■□□□□ 0.28
LINC00643-207ENST00000637212 COL5A3P25940 1745 aaPredicted RBP16.79■□□□□ 0.28
LINC00643-207ENST00000637212 HDAC1Q13547 482 aaPredicted RBP16.78■□□□□ 0.28
LINC00643-207ENST00000637212 DEFB132Q7Z7B7 95 aa16.78■□□□□ 0.28
LINC00643-207ENST00000637212 ZBTB38Q8NAP3 1195 aaPredicted RBP16.78■□□□□ 0.28
LINC00643-207ENST00000637212 BCL2L12Q9HB09 334 aa16.78■□□□□ 0.28
LINC00643-207ENST00000637212 STK32BQ9NY57 414 aa16.78■□□□□ 0.28
LINC00643-207ENST00000637212 USP42Q9H9J4 1324 aaKnown RBP16.77■□□□□ 0.28
LINC00643-207ENST00000637212 C4BP0C0L5 1744 aa16.77■□□□□ 0.28
LINC00643-207ENST00000637212 PHF14O94880 888 aa16.77■□□□□ 0.28
LINC00643-207ENST00000637212 PCCAP05165 728 aaPredicted RBP16.77■□□□□ 0.28
LINC00643-207ENST00000637212 SLC15A2Q16348 729 aa16.77■□□□□ 0.28
LINC00643-207ENST00000637212 ZNF827Q17R98 1081 aa16.77■□□□□ 0.28
LINC00643-207ENST00000637212 SMIM5Q71RC9 77 aa16.77■□□□□ 0.28
LINC00643-207ENST00000637212 PPP1R42Q7Z4L9 355 aa16.77■□□□□ 0.28
LINC00643-207ENST00000637212 CASP7P55210 303 aa16.76■□□□□ 0.27
LINC00643-207ENST00000637212 ATP8B2P98198 1209 aa16.76■□□□□ 0.27
LINC00643-207ENST00000637212 ANKRD44Q8N8A2 993 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms