RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 FSTL1Q12841 308 aa12.64□□□□□ -0.39
CACNA1A-236ENST00000637117 PDIA6Q15084 440 aa12.64□□□□□ -0.39
CACNA1A-236ENST00000637117 DALRD3Q5D0E6 543 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-236ENST00000637117 RBM26Q5T8P6 1007 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-236ENST00000637117 GPIHBP1Q8IV16 184 aa12.64□□□□□ -0.39
CACNA1A-236ENST00000637117 KLRG1Q96E93 195 aa12.64□□□□□ -0.39
CACNA1A-236ENST00000637117 IER5LQ5T953 404 aa12.63□□□□□ -0.39
CACNA1A-236ENST00000637117 OCEL1Q9H607 264 aa12.63□□□□□ -0.39
CACNA1A-236ENST00000637117 RRAGCQ9HB90 399 aa12.63□□□□□ -0.39
CACNA1A-236ENST00000637117 KDM2BQ8NHM5 1336 aa12.62□□□□□ -0.39
CACNA1A-236ENST00000637117 PLEKHG2Q9H7P9 1386 aa12.62□□□□□ -0.39
CACNA1A-236ENST00000637117 SPDYE16A6NNV3 312 aaPredicted RBP12.62□□□□□ -0.39
CACNA1A-236ENST00000637117 G3V3G9 751 aa12.62□□□□□ -0.39
CACNA1A-236ENST00000637117 PTCD1O75127 700 aaKnown RBP12.62□□□□□ -0.39
CACNA1A-236ENST00000637117 MTHFSP49914 203 aa12.62□□□□□ -0.39
CACNA1A-236ENST00000637117 AMOTQ4VCS5 1084 aa12.62□□□□□ -0.39
CACNA1A-236ENST00000637117 ASTLQ6HA08 431 aaPredicted RBP12.62□□□□□ -0.39
CACNA1A-236ENST00000637117 ZNF530Q6P9A1 599 aaPredicted RBP12.62□□□□□ -0.39
CACNA1A-236ENST00000637117 JMYQ8N9B5 988 aa12.62□□□□□ -0.39
CACNA1A-236ENST00000637117 RNF181Q9P0P0 153 aa12.62□□□□□ -0.39
CACNA1A-236ENST00000637117 SRP68Q9UHB9 627 aaKnown RBP12.62□□□□□ -0.39
CACNA1A-236ENST00000637117 BOLA1Q9Y3E2 137 aa12.62□□□□□ -0.39
CACNA1A-236ENST00000637117 C4AP0C0L4 1744 aa12.62□□□□□ -0.39
CACNA1A-236ENST00000637117 CRKLP46109 303 aaKnown RBP12.61□□□□□ -0.39
CACNA1A-236ENST00000637117 COL13A1Q5TAT6 717 aaPredicted RBP12.61□□□□□ -0.39
CACNA1A-236ENST00000637117 NFATC2IPQ8NCF5 419 aa12.61□□□□□ -0.39
CACNA1A-236ENST00000637117 TMEM121BQ9BXQ6 578 aaPredicted RBP12.61□□□□□ -0.39
CACNA1A-236ENST00000637117 ANKRD26Q9UPS8 1709 aa12.61□□□□□ -0.39
CACNA1A-236ENST00000637117 MYH14Q7Z406 1995 aaKnown RBP12.61□□□□□ -0.39
CACNA1A-236ENST00000637117 ZNF831Q5JPB2 1677 aa12.61□□□□□ -0.39
CACNA1A-236ENST00000637117 BRCA1P38398 1863 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-236ENST00000637117 CHRNA5P30532 468 aa12.6□□□□□ -0.39
CACNA1A-236ENST00000637117 DDR1Q08345 913 aa12.6□□□□□ -0.39
CACNA1A-236ENST00000637117 POLR3GLQ9BT43 218 aa12.6□□□□□ -0.39
CACNA1A-236ENST00000637117 USP42Q9H9J4 1324 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-236ENST00000637117 KCPQ6ZWJ8 1503 aa12.59□□□□□ -0.39
CACNA1A-236ENST00000637117 C2orf72A6NCS6 295 aa12.59□□□□□ -0.39
CACNA1A-236ENST00000637117 TM4SF1P30408 202 aa12.59□□□□□ -0.39
CACNA1A-236ENST00000637117 C1orf141Q5JVX7 400 aa12.59□□□□□ -0.39
CACNA1A-236ENST00000637117 PLPP6Q8IY26 295 aa12.59□□□□□ -0.39
CACNA1A-236ENST00000637117 WDR90Q96KV7 1748 aa12.59□□□□□ -0.39
CACNA1A-236ENST00000637117 ARFGEF1Q9Y6D6 1849 aa12.58□□□□□ -0.4
CACNA1A-236ENST00000637117 POLRMTO00411 1230 aaKnown RBP12.58□□□□□ -0.4
CACNA1A-236ENST00000637117 KDM6AO15550 1401 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-236ENST00000637117 COL5A3P25940 1745 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-236ENST00000637117 INTS5Q6P9B9 1019 aaKnown RBP12.58□□□□□ -0.4
CACNA1A-236ENST00000637117 SMC1BQ8NDV3 1235 aa12.58□□□□□ -0.4
CACNA1A-236ENST00000637117 ZPR1O75312 459 aa12.57□□□□□ -0.4
CACNA1A-236ENST00000637117 PLCG2P16885 1265 aa12.57□□□□□ -0.4
CACNA1A-236ENST00000637117 USPL1Q5W0Q7 1092 aa12.56□□□□□ -0.4
CACNA1A-236ENST00000637117 AEBP1Q8IUX7 1158 aa12.56□□□□□ -0.4
CACNA1A-236ENST00000637117 RASSF7Q02833 373 aa12.55□□□□□ -0.4
CACNA1A-236ENST00000637117 SULT6B1Q6IMI4 303 aa12.55□□□□□ -0.4
CACNA1A-236ENST00000637117 DNAJC10Q8IXB1 793 aa12.55□□□□□ -0.4
CACNA1A-236ENST00000637117 TNS4Q8IZW8 715 aa12.55□□□□□ -0.4
CACNA1A-236ENST00000637117 SBF1O95248 1867 aa12.55□□□□□ -0.4
CACNA1A-236ENST00000637117 GLTPD2A6NH11 291 aa12.54□□□□□ -0.4
CACNA1A-236ENST00000637117 VEGFAP15692 232 aaPredicted RBP12.54□□□□□ -0.4
CACNA1A-236ENST00000637117 PANK3Q9H999 370 aa12.54□□□□□ -0.4
CACNA1A-236ENST00000637117 ZC3H4Q9UPT8 1303 aaKnown RBP12.54□□□□□ -0.4
CACNA1A-236ENST00000637117 LMNB1P20700 586 aa12.53□□□□□ -0.4
CACNA1A-236ENST00000637117 NFIXQ14938 502 aa12.53□□□□□ -0.4
CACNA1A-236ENST00000637117 MORC1Q86VD1 984 aa12.53□□□□□ -0.4
CACNA1A-236ENST00000637117 NARFQ9UHQ1 456 aa12.53□□□□□ -0.4
CACNA1A-236ENST00000637117 SOS1Q07889 1333 aaPredicted RBP12.53□□□□□ -0.4
CACNA1A-236ENST00000637117 SERPINB2P05120 415 aa12.52□□□□□ -0.41
CACNA1A-236ENST00000637117 CYP19A1P11511 503 aaPredicted RBP12.52□□□□□ -0.41
CACNA1A-236ENST00000637117 PRELPP51888 382 aa12.52□□□□□ -0.41
CACNA1A-236ENST00000637117 AKAP4Q5JQC9 854 aa12.52□□□□□ -0.41
CACNA1A-236ENST00000637117 ERICH6Q7L0X2 663 aa12.52□□□□□ -0.41
CACNA1A-236ENST00000637117 TTLL6Q8N841 843 aa12.52□□□□□ -0.41
CACNA1A-236ENST00000637117 SLC52A2Q9HAB3 445 aa12.52□□□□□ -0.41
CACNA1A-236ENST00000637117 LGR6Q9HBX8 967 aa12.52□□□□□ -0.41
CACNA1A-236ENST00000637117 IL13P35225 146 aa12.51□□□□□ -0.41
CACNA1A-236ENST00000637117 SLC39A6Q13433 755 aa12.51□□□□□ -0.41
CACNA1A-236ENST00000637117 C2CD5Q86YS7 1000 aa12.51□□□□□ -0.41
CACNA1A-236ENST00000637117 H0YIN7 160 aa12.5□□□□□ -0.41
CACNA1A-236ENST00000637117 HSPA1AP0DMV8 641 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-236ENST00000637117 HSPA1BP0DMV9 641 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-236ENST00000637117 KRI1Q8N9T8 703 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-236ENST00000637117 L3MBTL3Q96JM7 780 aaPredicted RBP12.5□□□□□ -0.41
CACNA1A-236ENST00000637117 BCL2L12Q9HB09 334 aa12.5□□□□□ -0.41
CACNA1A-236ENST00000637117 TNRC6CQ9HCJ0 1690 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-236ENST00000637117 TJP1Q07157 1748 aa12.49□□□□□ -0.41
CACNA1A-236ENST00000637117 POTECB2RU33 542 aa12.49□□□□□ -0.41
CACNA1A-236ENST00000637117 RNMTO43148 476 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-236ENST00000637117 MAP3K9P80192 1104 aa12.49□□□□□ -0.41
CACNA1A-236ENST00000637117 ZBTB1Q9Y2K1 713 aa12.49□□□□□ -0.41
CACNA1A-236ENST00000637117 PCNTO95613 3336 aa12.49□□□□□ -0.41
CACNA1A-236ENST00000637117 ADAMTS7Q9UKP4 1686 aa12.48□□□□□ -0.41
CACNA1A-236ENST00000637117 COL15A1P39059 1388 aa12.48□□□□□ -0.41
CACNA1A-236ENST00000637117 AFDNP55196 1824 aaKnown RBP12.47□□□□□ -0.41
CACNA1A-236ENST00000637117 NFKBIEO00221 500 aa12.47□□□□□ -0.41
CACNA1A-236ENST00000637117 CANXP27824 592 aaKnown RBP12.47□□□□□ -0.41
CACNA1A-236ENST00000637117 BICDL1Q6ZP65 573 aa12.47□□□□□ -0.41
CACNA1A-236ENST00000637117 ZNF622Q969S3 477 aaKnown RBP eCLIP12.47□□□□□ -0.41
CACNA1A-236ENST00000637117 SCN11AQ9UI33 1791 aa12.46□□□□□ -0.41
CACNA1A-236ENST00000637117 SEC24BO95487 1268 aa12.46□□□□□ -0.41
CACNA1A-236ENST00000637117 EIF4G2P78344 907 aaKnown RBP eCLIP12.46□□□□□ -0.41
CACNA1A-236ENST00000637117 TMEM92Q6UXU6 159 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms