RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 CCDC30Q5VVM6 783 aa10.36□□□□□ -0.75
CACNA1A-232ENST00000636966 RBM42Q9BTD8 480 aaKnown RBP10.36□□□□□ -0.75
CACNA1A-232ENST00000636966 PALLDQ8WX93 1383 aa10.36□□□□□ -0.75
CACNA1A-232ENST00000636966 ZKSCAN2Q63HK3 967 aa10.36□□□□□ -0.75
CACNA1A-232ENST00000636966 C4AP0C0L4 1744 aa10.36□□□□□ -0.75
CACNA1A-232ENST00000636966 C4BP0C0L5 1744 aa10.36□□□□□ -0.75
CACNA1A-232ENST00000636966 KIF13BQ9NQT8 1826 aa10.36□□□□□ -0.75
CACNA1A-232ENST00000636966 CAPN15O75808 1086 aa10.35□□□□□ -0.75
CACNA1A-232ENST00000636966 TRIM37O94972 964 aa10.35□□□□□ -0.75
CACNA1A-232ENST00000636966 CYP19A1P11511 503 aaPredicted RBP10.35□□□□□ -0.75
CACNA1A-232ENST00000636966 PDE3AQ14432 1141 aa10.35□□□□□ -0.75
CACNA1A-232ENST00000636966 DDRGK1Q96HY6 314 aa10.35□□□□□ -0.75
CACNA1A-232ENST00000636966 LRRC4BQ9NT99 713 aa10.35□□□□□ -0.75
CACNA1A-232ENST00000636966 LOC102724428A0A0B4J2F2 783 aa10.35□□□□□ -0.75
CACNA1A-232ENST00000636966 SIK1P57059 783 aa10.35□□□□□ -0.75
CACNA1A-232ENST00000636966 PROM2Q8N271 834 aa10.35□□□□□ -0.75
CACNA1A-232ENST00000636966 DZIP1LQ8IYY4 767 aaKnown RBP10.35□□□□□ -0.75
CACNA1A-232ENST00000636966 KIF16BQ96L93 1317 aa10.34□□□□□ -0.75
CACNA1A-232ENST00000636966 DDX60Q8IY21 1712 aaKnown RBP10.34□□□□□ -0.75
CACNA1A-232ENST00000636966 SOS1Q07889 1333 aaPredicted RBP10.34□□□□□ -0.75
CACNA1A-232ENST00000636966 INTS5Q6P9B9 1019 aaKnown RBP10.34□□□□□ -0.75
CACNA1A-232ENST00000636966 ARHGAP45Q92619 1136 aa10.34□□□□□ -0.75
CACNA1A-232ENST00000636966 DDX21Q9NR30 783 aaKnown RBP eCLIP10.34□□□□□ -0.75
CACNA1A-232ENST00000636966 DBF4Q9UBU7 674 aaPredicted RBP10.34□□□□□ -0.75
CACNA1A-232ENST00000636966 LINC00116Q8NCU8 138 aa10.34□□□□□ -0.75
CACNA1A-232ENST00000636966 UPF2Q9HAU5 1272 aaKnown RBP10.34□□□□□ -0.75
CACNA1A-232ENST00000636966 TTLL7Q6ZT98 887 aa10.33□□□□□ -0.76
CACNA1A-232ENST00000636966 ITPRIPQ8IWB1 547 aa10.33□□□□□ -0.76
CACNA1A-232ENST00000636966 VSIG10Q8N0Z9 540 aa10.33□□□□□ -0.76
CACNA1A-232ENST00000636966 ZBTB1Q9Y2K1 713 aa10.33□□□□□ -0.76
CACNA1A-232ENST00000636966 ZNF646O15015 1829 aaPredicted RBP10.33□□□□□ -0.76
CACNA1A-232ENST00000636966 PI4KAP2A4QPH2 592 aa10.33□□□□□ -0.76
CACNA1A-232ENST00000636966 MVPQ14764 893 aaKnown RBP10.33□□□□□ -0.76
CACNA1A-232ENST00000636966 PI4KAP1Q8N8J0 262 aa10.33□□□□□ -0.76
CACNA1A-232ENST00000636966 BACH2Q9BYV9 841 aa10.33□□□□□ -0.76
CACNA1A-232ENST00000636966 IPO8O15397 1037 aaKnown RBP10.33□□□□□ -0.76
CACNA1A-232ENST00000636966 AIMP1Q12904 312 aaKnown RBP10.33□□□□□ -0.76
CACNA1A-232ENST00000636966 UBR3Q6ZT12 1888 aa10.33□□□□□ -0.76
CACNA1A-232ENST00000636966 COPS6Q7L5N1 327 aa10.33□□□□□ -0.76
CACNA1A-232ENST00000636966 RWDD1Q9H446 243 aaPredicted RBP10.33□□□□□ -0.76
CACNA1A-232ENST00000636966 DLEC1Q9Y238 1755 aa10.33□□□□□ -0.76
CACNA1A-232ENST00000636966 ZBTB7BO15156 539 aaPredicted RBP10.32□□□□□ -0.76
CACNA1A-232ENST00000636966 ATP6V1AP38606 617 aa10.32□□□□□ -0.76
CACNA1A-232ENST00000636966 XAGE3Q8WTP9 111 aa10.32□□□□□ -0.76
CACNA1A-232ENST00000636966 BCL11BQ9C0K0 894 aaPredicted RBP10.32□□□□□ -0.76
CACNA1A-232ENST00000636966 PCDHB15Q9Y5E8 787 aa10.32□□□□□ -0.76
CACNA1A-232ENST00000636966 KIAA1551Q9HCM1 1747 aa10.32□□□□□ -0.76
CACNA1A-232ENST00000636966 MKRN4PQ13434 485 aaPredicted RBP10.32□□□□□ -0.76
CACNA1A-232ENST00000636966 FKBP5Q13451 457 aaPredicted RBP10.32□□□□□ -0.76
CACNA1A-232ENST00000636966 STK31Q9BXU1 1019 aa10.32□□□□□ -0.76
CACNA1A-232ENST00000636966 PTPRCP08575 1304 aa10.32□□□□□ -0.76
CACNA1A-232ENST00000636966 FAM161AQ3B820 660 aa10.31□□□□□ -0.76
CACNA1A-232ENST00000636966 PXDNLA1KZ92 1463 aa10.31□□□□□ -0.76
CACNA1A-232ENST00000636966 FAM196AQ6ZSG2 479 aa10.31□□□□□ -0.76
CACNA1A-232ENST00000636966 CRKLP46109 303 aaKnown RBP10.31□□□□□ -0.76
CACNA1A-232ENST00000636966 INTS3Q68E01 1043 aaKnown RBP10.31□□□□□ -0.76
CACNA1A-232ENST00000636966 ZBTB40Q9NUA8 1239 aa10.31□□□□□ -0.76
CACNA1A-232ENST00000636966 IGKV5-2P06315 115 aa10.3□□□□□ -0.76
CACNA1A-232ENST00000636966 C1QBPQ07021 282 aaKnown RBP10.3□□□□□ -0.76
CACNA1A-232ENST00000636966 POLA2Q14181 598 aa10.3□□□□□ -0.76
CACNA1A-232ENST00000636966 BEND3Q5T5X7 828 aa10.3□□□□□ -0.76
CACNA1A-232ENST00000636966 SLC4A10Q6U841 1118 aa10.3□□□□□ -0.76
CACNA1A-232ENST00000636966 ARXQ96QS3 562 aa10.3□□□□□ -0.76
CACNA1A-232ENST00000636966 C1orf115Q9H7X2 142 aa10.3□□□□□ -0.76
CACNA1A-232ENST00000636966 MAP3K2Q9Y2U5 619 aa10.3□□□□□ -0.76
CACNA1A-232ENST00000636966 LRP5O75197 1615 aa10.3□□□□□ -0.76
CACNA1A-232ENST00000636966 IGHDP01880 384 aa10.3□□□□□ -0.76
CACNA1A-232ENST00000636966 CWF19L2Q2TBE0 894 aaKnown RBP10.3□□□□□ -0.76
CACNA1A-232ENST00000636966 MEIS3Q99687 375 aa10.3□□□□□ -0.76
CACNA1A-232ENST00000636966 ARAP2Q8WZ64 1704 aa10.3□□□□□ -0.76
CACNA1A-232ENST00000636966 HYPKQ9NX55 129 aa10.29□□□□□ -0.76
CACNA1A-232ENST00000636966 SIRT2Q8IXJ6 389 aa10.29□□□□□ -0.76
CACNA1A-232ENST00000636966 HLFQ16534 295 aa10.29□□□□□ -0.76
CACNA1A-232ENST00000636966 LRRC37AA6NMS7 1700 aa10.29□□□□□ -0.76
CACNA1A-232ENST00000636966 ABCB7O75027 752 aa10.28□□□□□ -0.76
CACNA1A-232ENST00000636966 USP44Q9H0E7 712 aa10.28□□□□□ -0.76
CACNA1A-232ENST00000636966 NBPF7P0C2Y1 421 aaPredicted RBP10.28□□□□□ -0.76
CACNA1A-232ENST00000636966 EIF5P55010 431 aaKnown RBP10.28□□□□□ -0.76
CACNA1A-232ENST00000636966 KSR2Q6VAB6 950 aa10.28□□□□□ -0.76
CACNA1A-232ENST00000636966 API5Q9BZZ5 524 aaKnown RBP10.28□□□□□ -0.76
CACNA1A-232ENST00000636966 DNAAF4Q8WXU2 420 aa10.27□□□□□ -0.76
CACNA1A-232ENST00000636966 ZBTB3Q9H5J0 574 aa10.27□□□□□ -0.76
CACNA1A-232ENST00000636966 AAMPQ13685 434 aa10.27□□□□□ -0.77
CACNA1A-232ENST00000636966 ANKRD13DQ6ZTN6 518 aa10.27□□□□□ -0.77
CACNA1A-232ENST00000636966 CCNL1Q9UK58 526 aaPredicted RBP10.27□□□□□ -0.77
CACNA1A-232ENST00000636966 ZNF330Q9Y3S2 320 aaPredicted RBP10.27□□□□□ -0.77
CACNA1A-232ENST00000636966 STARD3NLO95772 234 aa10.27□□□□□ -0.77
CACNA1A-232ENST00000636966 JARID2Q92833 1246 aaPredicted RBP10.27□□□□□ -0.77
CACNA1A-232ENST00000636966 ATP10DQ9P241 1426 aa10.27□□□□□ -0.77
CACNA1A-232ENST00000636966 ATP5J2-PTCD1G3V325 749 aa10.27□□□□□ -0.77
CACNA1A-232ENST00000636966 KAZALD1Q96I82 304 aa10.27□□□□□ -0.77
CACNA1A-232ENST00000636966 TBC1D2BQ9UPU7 963 aa10.27□□□□□ -0.77
CACNA1A-232ENST00000636966 SMARCC1Q92922 1105 aaPredicted RBP10.26□□□□□ -0.77
CACNA1A-232ENST00000636966 CHMP4BQ9H444 224 aaKnown RBP10.26□□□□□ -0.77
CACNA1A-232ENST00000636966 DDX19BQ9UMR2 479 aa10.26□□□□□ -0.77
CACNA1A-232ENST00000636966 ERBB4Q15303 1308 aa10.26□□□□□ -0.77
CACNA1A-232ENST00000636966 KDM2BQ8NHM5 1336 aa10.26□□□□□ -0.77
CACNA1A-232ENST00000636966 CCDC87Q9NVE4 849 aa10.26□□□□□ -0.77
CACNA1A-232ENST00000636966 TEX13AQ9BXU3 409 aaPredicted RBP10.25□□□□□ -0.77
CACNA1A-232ENST00000636966 APBA3O96018 575 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms