RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 SYAP1Q96A49 352 aaPredicted RBP19.38■□□□□ 0.69
CHRNA7-221ENST00000636898 NSFL1CQ9UNZ2 370 aaKnown RBP19.38■□□□□ 0.69
CHRNA7-221ENST00000636898 MST1RQ04912 1400 aa19.37■□□□□ 0.69
CHRNA7-221ENST00000636898 CWC27Q6UX04 472 aaKnown RBP19.37■□□□□ 0.69
CHRNA7-221ENST00000636898 DIAPH3Q9NSV4 1193 aa19.37■□□□□ 0.69
CHRNA7-221ENST00000636898 LIMCH1Q9UPQ0 1083 aa19.37■□□□□ 0.69
CHRNA7-221ENST00000636898 DDX58O95786 925 aaKnown RBP19.37■□□□□ 0.69
CHRNA7-221ENST00000636898 PROSER3Q2NL68 480 aa19.37■□□□□ 0.69
CHRNA7-221ENST00000636898 NPHP4O75161 1426 aaPredicted RBP19.36■□□□□ 0.69
CHRNA7-221ENST00000636898 SYCE3A1L190 88 aa19.36■□□□□ 0.69
CHRNA7-221ENST00000636898 RASEFQ8IZ41 740 aa19.36■□□□□ 0.69
CHRNA7-221ENST00000636898 TMEM87AQ8NBN3 555 aa19.36■□□□□ 0.69
CHRNA7-221ENST00000636898 NAP1L5Q96NT1 182 aaPredicted RBP19.36■□□□□ 0.69
CHRNA7-221ENST00000636898 ORAI2Q96SN7 254 aa19.36■□□□□ 0.69
CHRNA7-221ENST00000636898 DDX21Q9NR30 783 aaKnown RBP eCLIP19.36■□□□□ 0.69
CHRNA7-221ENST00000636898 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.36■□□□□ 0.69
CHRNA7-221ENST00000636898 GRM8O00222 908 aa19.36■□□□□ 0.69
CHRNA7-221ENST00000636898 IFIT2P09913 472 aaKnown RBP19.36■□□□□ 0.69
CHRNA7-221ENST00000636898 KCNB2Q92953 911 aa19.36■□□□□ 0.69
CHRNA7-221ENST00000636898 RPAP1Q9BWH6 1393 aaPredicted RBP19.36■□□□□ 0.69
CHRNA7-221ENST00000636898 KIF1AQ12756 1690 aa19.35■□□□□ 0.69
CHRNA7-221ENST00000636898 AK2P54819 239 aa19.35■□□□□ 0.69
CHRNA7-221ENST00000636898 EVI5LQ96CN4 794 aa19.35■□□□□ 0.69
CHRNA7-221ENST00000636898 TM6SF1Q9BZW5 370 aa19.35■□□□□ 0.69
CHRNA7-221ENST00000636898 PHF14O94880 888 aa19.34■□□□□ 0.69
CHRNA7-221ENST00000636898 SPG7Q9UQ90 795 aa19.34■□□□□ 0.69
CHRNA7-221ENST00000636898 CWF19L2Q2TBE0 894 aaKnown RBP19.34■□□□□ 0.69
CHRNA7-221ENST00000636898 RUFY3Q7L099 469 aa19.34■□□□□ 0.69
CHRNA7-221ENST00000636898 HIP1O00291 1037 aa19.33■□□□□ 0.69
CHRNA7-221ENST00000636898 VPS53Q5VIR6 699 aa19.32■□□□□ 0.68
CHRNA7-221ENST00000636898 AXIN2Q9Y2T1 843 aa19.32■□□□□ 0.68
CHRNA7-221ENST00000636898 ZSCAN22P10073 491 aaPredicted RBP19.32■□□□□ 0.68
CHRNA7-221ENST00000636898 PA2G4Q9UQ80 394 aaKnown RBP19.32■□□□□ 0.68
CHRNA7-221ENST00000636898 ERBB3P21860 1342 aa19.32■□□□□ 0.68
CHRNA7-221ENST00000636898 SCN11AQ9UI33 1791 aa19.31■□□□□ 0.68
CHRNA7-221ENST00000636898 PRAMEF22A3QJZ6 481 aa19.31■□□□□ 0.68
CHRNA7-221ENST00000636898 CASTP20810 708 aaKnown RBP19.31■□□□□ 0.68
CHRNA7-221ENST00000636898 MSNP26038 577 aaKnown RBP19.31■□□□□ 0.68
CHRNA7-221ENST00000636898 XPCQ01831 940 aaPredicted RBP19.31■□□□□ 0.68
CHRNA7-221ENST00000636898 PDIA6Q15084 440 aa19.31■□□□□ 0.68
CHRNA7-221ENST00000636898 AACSQ86V21 672 aa19.31■□□□□ 0.68
CHRNA7-221ENST00000636898 KAZALD1Q96I82 304 aa19.31■□□□□ 0.68
CHRNA7-221ENST00000636898 SUCLG2Q96I99 432 aa19.31■□□□□ 0.68
CHRNA7-221ENST00000636898 SNRKQ9NRH2 765 aa19.31■□□□□ 0.68
CHRNA7-221ENST00000636898 ADAMTSL3P82987 1691 aa19.31■□□□□ 0.68
CHRNA7-221ENST00000636898 USP48Q86UV5 1035 aa19.31■□□□□ 0.68
CHRNA7-221ENST00000636898 ZSCAN31Q96LW9 406 aaPredicted RBP19.31■□□□□ 0.68
CHRNA7-221ENST00000636898 ZSWIM6Q9HCJ5 1215 aa19.31■□□□□ 0.68
CHRNA7-221ENST00000636898 SH2B1Q9NRF2 756 aaPredicted RBP19.31■□□□□ 0.68
CHRNA7-221ENST00000636898 NOL7Q9UMY1 257 aaKnown RBP19.31■□□□□ 0.68
CHRNA7-221ENST00000636898 ATP6V1DQ9Y5K8 247 aa19.31■□□□□ 0.68
CHRNA7-221ENST00000636898 RGPD5Q99666 1765 aa19.31■□□□□ 0.68
CHRNA7-221ENST00000636898 TCHHQ07283 1943 aa19.3■□□□□ 0.68
CHRNA7-221ENST00000636898 ABCC6O95255 1503 aa19.3■□□□□ 0.68
CHRNA7-221ENST00000636898 STX6O43752 255 aa19.3■□□□□ 0.68
CHRNA7-221ENST00000636898 G3BP1Q13283 466 aaKnown RBP eCLIP19.3■□□□□ 0.68
CHRNA7-221ENST00000636898 LARP1Q6PKG0 1096 aaKnown RBP19.3■□□□□ 0.68
CHRNA7-221ENST00000636898 KRT28Q7Z3Y7 464 aa19.3■□□□□ 0.68
CHRNA7-221ENST00000636898 KLHL34Q8N239 644 aa19.3■□□□□ 0.68
CHRNA7-221ENST00000636898 BICC1Q9H694 974 aaKnown RBP19.3■□□□□ 0.68
CHRNA7-221ENST00000636898 SMC3Q9UQE7 1217 aa19.3■□□□□ 0.68
CHRNA7-221ENST00000636898 PLEKHG2Q9H7P9 1386 aa19.3■□□□□ 0.68
CHRNA7-221ENST00000636898 MRC1P22897 1456 aa19.3■□□□□ 0.68
CHRNA7-221ENST00000636898 SASH1O94885 1247 aa19.29■□□□□ 0.68
CHRNA7-221ENST00000636898 PTH1RQ03431 593 aa19.29■□□□□ 0.68
CHRNA7-221ENST00000636898 NECTIN1Q15223 517 aa19.29■□□□□ 0.68
CHRNA7-221ENST00000636898 LMOD2Q6P5Q4 547 aa19.29■□□□□ 0.68
CHRNA7-221ENST00000636898 ZNF790Q6PG37 636 aa19.29■□□□□ 0.68
CHRNA7-221ENST00000636898 TSPY26PQ9H489 355 aa19.29■□□□□ 0.68
CHRNA7-221ENST00000636898 ALS2Q96Q42 1657 aa19.29■□□□□ 0.68
CHRNA7-221ENST00000636898 CCDC171Q6TFL3 1326 aa19.29■□□□□ 0.68
CHRNA7-221ENST00000636898 SYT1P21579 422 aa19.29■□□□□ 0.68
CHRNA7-221ENST00000636898 CYP46A1Q9Y6A2 500 aa19.29■□□□□ 0.68
CHRNA7-221ENST00000636898 ZKSCAN1P17029 563 aaPredicted RBP19.28■□□□□ 0.68
CHRNA7-221ENST00000636898 PDRG1Q9NUG6 133 aa19.28■□□□□ 0.68
CHRNA7-221ENST00000636898 C1orf167Q5SNV9 1468 aa19.28■□□□□ 0.68
CHRNA7-221ENST00000636898 C5P01031 1676 aa19.28■□□□□ 0.68
CHRNA7-221ENST00000636898 GADD45BO75293 160 aaPredicted RBP19.28■□□□□ 0.68
CHRNA7-221ENST00000636898 PRPF40BQ6NWY9 871 aaKnown RBP19.28■□□□□ 0.68
CHRNA7-221ENST00000636898 EAF2Q96CJ1 260 aaPredicted RBP19.28■□□□□ 0.68
CHRNA7-221ENST00000636898 JAKMIP1Q96N16 626 aaKnown RBP19.28■□□□□ 0.68
CHRNA7-221ENST00000636898 SLC52A2Q9HAB3 445 aa19.28■□□□□ 0.68
CHRNA7-221ENST00000636898 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.28■□□□□ 0.68
CHRNA7-221ENST00000636898 NPHP3Q7Z494 1330 aa19.27■□□□□ 0.68
CHRNA7-221ENST00000636898 IGKV5-2P06315 115 aa19.27■□□□□ 0.68
CHRNA7-221ENST00000636898 PDIA4P13667 645 aaKnown RBP19.27■□□□□ 0.68
CHRNA7-221ENST00000636898 MCM5P33992 734 aa19.27■□□□□ 0.68
CHRNA7-221ENST00000636898 NEXNQ0ZGT2 675 aa19.27■□□□□ 0.68
CHRNA7-221ENST00000636898 MAP4K1Q92918 833 aa19.27■□□□□ 0.68
CHRNA7-221ENST00000636898 KDM6AO15550 1401 aaPredicted RBP19.26■□□□□ 0.67
CHRNA7-221ENST00000636898 F13A1P00488 732 aa19.26■□□□□ 0.67
CHRNA7-221ENST00000636898 RIC3Q7Z5B4 369 aa19.26■□□□□ 0.67
CHRNA7-221ENST00000636898 FAM184AQ8NB25 1140 aa19.26■□□□□ 0.67
CHRNA7-221ENST00000636898 RAPGEF4Q8WZA2 1011 aa19.26■□□□□ 0.67
CHRNA7-221ENST00000636898 GDPD2Q9HCC8 539 aa19.26■□□□□ 0.67
CHRNA7-221ENST00000636898 ZNF500O60304 480 aaPredicted RBP19.26■□□□□ 0.67
CHRNA7-221ENST00000636898 LETM1O95202 739 aaPredicted RBP19.26■□□□□ 0.67
CHRNA7-221ENST00000636898 UBE2HP62256 183 aa19.26■□□□□ 0.67
CHRNA7-221ENST00000636898 ADCK5Q3MIX3 580 aa19.26■□□□□ 0.67
CHRNA7-221ENST00000636898 NEURL1BA8MQ27 555 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms