RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-225	ENST00000636861	CHRDL2	Q6WN34	429 aa		4.96	□□□□□ -1.62
CHD2-225	ENST00000636861	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.96	□□□□□ -1.62
CHD2-225	ENST00000636861	CAPNS2	Q96L46	248 aa		4.96	□□□□□ -1.62
CHD2-225	ENST00000636861	TIGD1	Q96MW7	591 aa		4.96	□□□□□ -1.62
CHD2-225	ENST00000636861	CHMP4A	Q9BY43	222 aa		4.96	□□□□□ -1.62
CHD2-225	ENST00000636861	EFCC1	Q9HA90	598 aa		4.96	□□□□□ -1.62
CHD2-225	ENST00000636861	NOL7	Q9UMY1	257 aa	Known RBP	4.96	□□□□□ -1.62
CHD2-225	ENST00000636861	IFT172	Q9UG01	1749 aa		4.95	□□□□□ -1.62
CHD2-225	ENST00000636861	CLTCL1	P53675	1640 aa		4.95	□□□□□ -1.62
CHD2-225	ENST00000636861	CALR	P27797	417 aa	Known RBP	4.95	□□□□□ -1.62
CHD2-225	ENST00000636861	SLC4A3	P48751	1232 aa		4.95	□□□□□ -1.62
CHD2-225	ENST00000636861	CC2D1B	Q5T0F9	858 aa	Known RBP	4.95	□□□□□ -1.62
CHD2-225	ENST00000636861	ALYREF	Q86V81	257 aa	Known RBP	4.95	□□□□□ -1.62
CHD2-225	ENST00000636861	HSCB	Q8IWL3	235 aa		4.95	□□□□□ -1.62
CHD2-225	ENST00000636861	RGS22	Q8NE09	1264 aa		4.95	□□□□□ -1.62
CHD2-225	ENST00000636861	MYRIP	Q8NFW9	859 aa		4.95	□□□□□ -1.62
CHD2-225	ENST00000636861	GPR101	Q96P66	508 aa	Predicted RBP	4.95	□□□□□ -1.62
CHD2-225	ENST00000636861	BEGAIN	Q9BUH8	593 aa		4.95	□□□□□ -1.62
CHD2-225	ENST00000636861	PANK2	Q9BZ23	570 aa		4.95	□□□□□ -1.62
CHD2-225	ENST00000636861	SLK	Q9H2G2	1235 aa	Predicted RBP	4.95	□□□□□ -1.62
CHD2-225	ENST00000636861	DIAPH3	Q9NSV4	1193 aa		4.95	□□□□□ -1.62
CHD2-225	ENST00000636861	GEMIN8	Q9NWZ8	242 aa	Known RBP	4.95	□□□□□ -1.62
CHD2-225	ENST00000636861	SLIT3	O75094	1523 aa		4.95	□□□□□ -1.62
CHD2-225	ENST00000636861	ERBB3	P21860	1342 aa		4.95	□□□□□ -1.62
CHD2-225	ENST00000636861	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.95	□□□□□ -1.62
CHD2-225	ENST00000636861	TMEM265	A0A087WTH1	108 aa		4.94	□□□□□ -1.62
CHD2-225	ENST00000636861		A0A0G2JLW4	131 aa		4.94	□□□□□ -1.62
CHD2-225	ENST00000636861		H0YGN5	161 aa		4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	KRT37	O76014	449 aa		4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	GTF2F1	P35269	517 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	MMP14	P50281	582 aa		4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	MFAP1	P55081	439 aa	Known RBP	4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	KIAA2012	Q0VF49	1180 aa		4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	DDB1	Q16531	1140 aa		4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	KANK4	Q5T7N3	995 aa	Predicted RBP	4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	AMIGO3	Q86WK7	504 aa		4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	ACSBG1	Q96GR2	724 aa		4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	POLR3GL	Q9BT43	218 aa		4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	HIRIP3	Q9BW71	556 aa	Predicted RBP	4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	PRO3102	Q9H379	93 aa		4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	ANTXR1	Q9H6X2	564 aa		4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	RNF216	Q9NWF9	866 aa	Predicted RBP	4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	STXBP5L	Q9Y2K9	1186 aa		4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	ZKSCAN5	Q9Y2L8	839 aa		4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	THRAP3	Q9Y2W1	955 aa	Known RBP	4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	COL5A2	P05997	1499 aa	Predicted RBP	4.94	□□□□□ -1.62
CHD2-225	ENST00000636861	DICER1	Q9UPY3	1922 aa	Known RBP	4.93	□□□□□ -1.62
CHD2-225	ENST00000636861	POTEF	A5A3E0	1075 aa		4.93	□□□□□ -1.62
CHD2-225	ENST00000636861	GOLGA6L6	A8MZA4	724 aa		4.93	□□□□□ -1.62
CHD2-225	ENST00000636861	PHF14	O94880	888 aa		4.93	□□□□□ -1.62
CHD2-225	ENST00000636861	HSP90AB1	P08238	724 aa	Known RBP	4.93	□□□□□ -1.62
CHD2-225	ENST00000636861	MCC	P23508	829 aa		4.93	□□□□□ -1.62
CHD2-225	ENST00000636861	CRB1	P82279	1406 aa		4.93	□□□□□ -1.62
CHD2-225	ENST00000636861	RASSF7	Q02833	373 aa		4.93	□□□□□ -1.62
CHD2-225	ENST00000636861	GRM1	Q13255	1194 aa		4.93	□□□□□ -1.62
CHD2-225	ENST00000636861	FAM50A	Q14320	339 aa	Known RBP	4.93	□□□□□ -1.62
CHD2-225	ENST00000636861		Q7L0L9	218 aa		4.93	□□□□□ -1.62
CHD2-225	ENST00000636861	GOLGA6L1	Q8N7Z2	621 aa		4.93	□□□□□ -1.62
CHD2-225	ENST00000636861	SECISBP2L	Q93073	1101 aa	Known RBP	4.93	□□□□□ -1.62
CHD2-225	ENST00000636861	TRPM7	Q96QT4	1865 aa		4.93	□□□□□ -1.62
CHD2-225	ENST00000636861	CGN	Q9P2M7	1197 aa	Known RBP	4.93	□□□□□ -1.62
CHD2-225	ENST00000636861	TAF1L	Q8IZX4	1826 aa		4.93	□□□□□ -1.62
CHD2-225	ENST00000636861	USP6	P35125	1406 aa		4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	ERBIN	Q96RT1	1412 aa		4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	FCHSD2	O94868	740 aa		4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	TPM3	P06753	285 aa		4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	KCNA3	P22001	575 aa		4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	TNNT3	P45378	269 aa	Predicted RBP	4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	PSME1	Q06323	249 aa		4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	FMR1	Q06787	632 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	KCTD2	Q14681	263 aa		4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	SYCP1	Q15431	976 aa		4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	PNISR	Q8TF01	805 aa	Known RBP	4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	ZNF830	Q96NB3	372 aa	Predicted RBP	4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	ZIC5	Q96T25	663 aa		4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	BRMS1	Q9HCU9	246 aa		4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	OGFR	Q9NZT2	677 aa		4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	PHF8	Q9UPP1	1060 aa		4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	HDAC5	Q9UQL6	1122 aa		4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	XIRP2	A4UGR9	3374 aa		4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	C5	P01031	1676 aa		4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	UBR3	Q6ZT12	1888 aa		4.92	□□□□□ -1.62
CHD2-225	ENST00000636861	CA12	O43570	354 aa		4.91	□□□□□ -1.62
CHD2-225	ENST00000636861	CLSTN1	O94985	981 aa		4.91	□□□□□ -1.62
CHD2-225	ENST00000636861	DPEP1	P16444	411 aa		4.91	□□□□□ -1.62
CHD2-225	ENST00000636861	ZC3H6	P61129	1189 aa	Known RBP	4.91	□□□□□ -1.62
CHD2-225	ENST00000636861	KLHL40	Q2TBA0	621 aa		4.91	□□□□□ -1.62
CHD2-225	ENST00000636861	DCAF5	Q96JK2	942 aa		4.91	□□□□□ -1.62
CHD2-225	ENST00000636861	TBC1D32	Q96NH3	1257 aa		4.91	□□□□□ -1.62
CHD2-225	ENST00000636861	CRBN	Q96SW2	442 aa		4.91	□□□□□ -1.62
CHD2-225	ENST00000636861	GZF1	Q9H116	711 aa	Predicted RBP	4.91	□□□□□ -1.62
CHD2-225	ENST00000636861		E9PCH4	1651 aa		4.91	□□□□□ -1.62
CHD2-225	ENST00000636861	CGNL1	Q0VF96	1302 aa		4.91	□□□□□ -1.62
CHD2-225	ENST00000636861	KIF7	Q2M1P5	1343 aa		4.91	□□□□□ -1.62
CHD2-225	ENST00000636861	ZC3H4	Q9UPT8	1303 aa	Known RBP	4.91	□□□□□ -1.62
CHD2-225	ENST00000636861	PLEKHH1	Q9ULM0	1364 aa		4.91	□□□□□ -1.62
CHD2-225	ENST00000636861	TULP1	O00294	542 aa	Predicted RBP	4.9	□□□□□ -1.63
CHD2-225	ENST00000636861	EVA1C	P58658	441 aa		4.9	□□□□□ -1.63
CHD2-225	ENST00000636861	ZNF445	P59923	1031 aa		4.9	□□□□□ -1.63
CHD2-225	ENST00000636861	CCDC184	Q52MB2	194 aa		4.9	□□□□□ -1.63

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