RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 KDM3BQ7LBC6 1761 aa10.57□□□□□ -0.72
PNKP-226ENST00000636840 MAP3K15Q6ZN16 1313 aa10.57□□□□□ -0.72
PNKP-226ENST00000636840 TUBGCP6Q96RT7 1819 aa10.56□□□□□ -0.72
PNKP-226ENST00000636840 EXOSC9Q06265 439 aaKnown RBP10.56□□□□□ -0.72
PNKP-226ENST00000636840 PDIA6Q15084 440 aa10.56□□□□□ -0.72
PNKP-226ENST00000636840 TBC1D9BQ66K14 1250 aa10.56□□□□□ -0.72
PNKP-226ENST00000636840 GIGYF2Q6Y7W6 1299 aaKnown RBP10.56□□□□□ -0.72
PNKP-226ENST00000636840 ANKRD13DQ6ZTN6 518 aa10.56□□□□□ -0.72
PNKP-226ENST00000636840 XAGE3Q8WTP9 111 aa10.56□□□□□ -0.72
PNKP-226ENST00000636840 NYXQ9GZU5 481 aa10.56□□□□□ -0.72
PNKP-226ENST00000636840 BCL2L12Q9HB09 334 aa10.56□□□□□ -0.72
PNKP-226ENST00000636840 CHPF2Q9P2E5 772 aa10.56□□□□□ -0.72
PNKP-226ENST00000636840 PDZRN3Q9UPQ7 1066 aa10.56□□□□□ -0.72
PNKP-226ENST00000636840 NIP7Q9Y221 180 aaKnown RBP eCLIP10.56□□□□□ -0.72
PNKP-226ENST00000636840 SRCAPQ6ZRS2 3230 aa10.56□□□□□ -0.72
PNKP-226ENST00000636840 POLRMTO00411 1230 aaKnown RBP10.55□□□□□ -0.72
PNKP-226ENST00000636840 ANXA1P04083 346 aa10.55□□□□□ -0.72
PNKP-226ENST00000636840 ST5P78524 1137 aa10.55□□□□□ -0.72
PNKP-226ENST00000636840 HNRNPUQ00839 825 aaKnown RBP eCLIP10.55□□□□□ -0.72
PNKP-226ENST00000636840 GPR162Q16538 588 aa10.55□□□□□ -0.72
PNKP-226ENST00000636840 TTLL7Q6ZT98 887 aa10.55□□□□□ -0.72
PNKP-226ENST00000636840 RIC3Q7Z5B4 369 aa10.55□□□□□ -0.72
PNKP-226ENST00000636840 NBPF5PQ86XG9 351 aaPredicted RBP10.55□□□□□ -0.72
PNKP-226ENST00000636840 ZBTB3Q9H5J0 574 aa10.55□□□□□ -0.72
PNKP-226ENST00000636840 FANCIQ9NVI1 1328 aa10.55□□□□□ -0.72
PNKP-226ENST00000636840 SLC4A2P04920 1241 aa10.54□□□□□ -0.72
PNKP-226ENST00000636840 SLFN5Q08AF3 891 aa10.54□□□□□ -0.72
PNKP-226ENST00000636840 HLFQ16534 295 aa10.54□□□□□ -0.72
PNKP-226ENST00000636840 PARP10Q53GL7 1025 aa10.54□□□□□ -0.72
PNKP-226ENST00000636840 PPP1R42Q7Z4L9 355 aa10.54□□□□□ -0.72
PNKP-226ENST00000636840 PELP1Q8IZL8 1130 aaKnown RBP10.54□□□□□ -0.72
PNKP-226ENST00000636840 TSPYL6Q8N831 410 aa10.54□□□□□ -0.72
PNKP-226ENST00000636840 CNBD1Q8NA66 436 aa10.54□□□□□ -0.72
PNKP-226ENST00000636840 PLBD2Q8NHP8 589 aa10.54□□□□□ -0.72
PNKP-226ENST00000636840 ZNF521Q96K83 1311 aa10.54□□□□□ -0.72
PNKP-226ENST00000636840 CARMIL3Q8ND23 1372 aa10.53□□□□□ -0.72
PNKP-226ENST00000636840 H0YIN7 160 aa10.53□□□□□ -0.72
PNKP-226ENST00000636840 GRIN3BO60391 1043 aa10.53□□□□□ -0.72
PNKP-226ENST00000636840 VAMP4O75379 141 aa10.53□□□□□ -0.72
PNKP-226ENST00000636840 PDE6BP35913 854 aa10.53□□□□□ -0.72
PNKP-226ENST00000636840 DDR1Q08345 913 aa10.53□□□□□ -0.72
PNKP-226ENST00000636840 TCIRG1Q13488 830 aa10.53□□□□□ -0.72
PNKP-226ENST00000636840 PROSER3Q2NL68 480 aa10.53□□□□□ -0.72
PNKP-226ENST00000636840 BRIP1Q9BX63 1249 aa10.53□□□□□ -0.72
PNKP-226ENST00000636840 FAM177BA6PVY3 158 aa10.52□□□□□ -0.73
PNKP-226ENST00000636840 ZNF428Q96B54 188 aa10.52□□□□□ -0.73
PNKP-226ENST00000636840 SPINK5Q9NQ38 1064 aaPredicted RBP10.52□□□□□ -0.73
PNKP-226ENST00000636840 A0A0G2JLW4 131 aa10.51□□□□□ -0.73
PNKP-226ENST00000636840 CT47B1P0C2W7 299 aaPredicted RBP10.51□□□□□ -0.73
PNKP-226ENST00000636840 HSP90B1P14625 803 aaKnown RBP10.51□□□□□ -0.73
PNKP-226ENST00000636840 GPTP24298 496 aa10.51□□□□□ -0.73
PNKP-226ENST00000636840 NEXNQ0ZGT2 675 aa10.51□□□□□ -0.73
PNKP-226ENST00000636840 LRP10Q7Z4F1 713 aa10.51□□□□□ -0.73
PNKP-226ENST00000636840 ZNF34Q8IZ26 560 aa10.51□□□□□ -0.73
PNKP-226ENST00000636840 NLGN2Q8NFZ4 835 aa10.51□□□□□ -0.73
PNKP-226ENST00000636840 UTP14AQ9BVJ6 771 aaKnown RBP10.51□□□□□ -0.73
PNKP-226ENST00000636840 PHAXQ9H814 394 aaKnown RBP10.51□□□□□ -0.73
PNKP-226ENST00000636840 PIM2Q9P1W9 311 aa10.51□□□□□ -0.73
PNKP-226ENST00000636840 LAMB4A4D0S4 1761 aa10.5□□□□□ -0.73
PNKP-226ENST00000636840 TCERG1O14776 1098 aaKnown RBP10.5□□□□□ -0.73
PNKP-226ENST00000636840 DPEP1P16444 411 aa10.5□□□□□ -0.73
PNKP-226ENST00000636840 PRR5LQ6MZQ0 368 aa10.5□□□□□ -0.73
PNKP-226ENST00000636840 KSR2Q6VAB6 950 aa10.5□□□□□ -0.73
PNKP-226ENST00000636840 TRMT112Q9UI30 125 aaKnown RBP10.5□□□□□ -0.73
PNKP-226ENST00000636840 COL24A1Q17RW2 1714 aa10.5□□□□□ -0.73
PNKP-226ENST00000636840 TRIM28Q13263 835 aaKnown RBP10.49□□□□□ -0.73
PNKP-226ENST00000636840 FKBP5Q13451 457 aaPredicted RBP10.49□□□□□ -0.73
PNKP-226ENST00000636840 C2CD5Q86YS7 1000 aa10.49□□□□□ -0.73
PNKP-226ENST00000636840 ZNF622Q969S3 477 aaKnown RBP eCLIP10.49□□□□□ -0.73
PNKP-226ENST00000636840 CDCA7LQ96GN5 454 aa10.49□□□□□ -0.73
PNKP-226ENST00000636840 RNF123Q5XPI4 1314 aa10.49□□□□□ -0.73
PNKP-226ENST00000636840 C4AP0C0L4 1744 aa10.49□□□□□ -0.73
PNKP-226ENST00000636840 PI4KAP2A4QPH2 592 aa10.48□□□□□ -0.73
PNKP-226ENST00000636840 ALDH1B1P30837 517 aa10.48□□□□□ -0.73
PNKP-226ENST00000636840 FLIIQ13045 1269 aa10.48□□□□□ -0.73
PNKP-226ENST00000636840 DALRD3Q5D0E6 543 aaKnown RBP10.48□□□□□ -0.73
PNKP-226ENST00000636840 SUSD4Q5VX71 490 aa10.48□□□□□ -0.73
PNKP-226ENST00000636840 TRMT2AQ8IZ69 625 aaKnown RBP10.48□□□□□ -0.73
PNKP-226ENST00000636840 TTLL6Q8N841 843 aa10.48□□□□□ -0.73
PNKP-226ENST00000636840 PI4KAP1Q8N8J0 262 aa10.48□□□□□ -0.73
PNKP-226ENST00000636840 CNKSR1Q969H4 720 aa10.48□□□□□ -0.73
PNKP-226ENST00000636840 NLRP3Q96P20 1036 aa10.48□□□□□ -0.73
PNKP-226ENST00000636840 MYD88Q99836 296 aa10.48□□□□□ -0.73
PNKP-226ENST00000636840 METTL22Q9BUU2 404 aaPredicted RBP10.48□□□□□ -0.73
PNKP-226ENST00000636840 BCS1LQ9Y276 419 aa10.48□□□□□ -0.73
PNKP-226ENST00000636840 ATP10DQ9P241 1426 aa10.48□□□□□ -0.73
PNKP-226ENST00000636840 ATP5J2-PTCD1G3V325 749 aa10.47□□□□□ -0.73
PNKP-226ENST00000636840 ALDH1L2Q3SY69 923 aa10.47□□□□□ -0.73
PNKP-226ENST00000636840 NLRP10Q86W26 655 aa10.47□□□□□ -0.73
PNKP-226ENST00000636840 CCDC24Q8N4L8 307 aa10.47□□□□□ -0.73
PNKP-226ENST00000636840 CCDC191Q8NCU4 936 aa10.47□□□□□ -0.73
PNKP-226ENST00000636840 MASTLQ96GX5 879 aa10.47□□□□□ -0.73
PNKP-226ENST00000636840 TMX4Q9H1E5 349 aaPredicted RBP10.47□□□□□ -0.73
PNKP-226ENST00000636840 MAP3K2Q9Y2U5 619 aa10.47□□□□□ -0.73
PNKP-226ENST00000636840 C10orf71Q711Q0 1435 aa10.47□□□□□ -0.73
PNKP-226ENST00000636840 NPR1P16066 1061 aa10.46□□□□□ -0.73
PNKP-226ENST00000636840 CHRNA5P30532 468 aa10.46□□□□□ -0.73
PNKP-226ENST00000636840 ERFEQ4G0M1 354 aa10.46□□□□□ -0.73
PNKP-226ENST00000636840 SLC10A5Q5PT55 438 aa10.46□□□□□ -0.73
PNKP-226ENST00000636840 STYK1Q6J9G0 422 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms