RNA–Protein interactions for RNA: ENST00000636705.1

CLN5-214, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-214ENST00000636705 MAP3K5Q99683 1374 aa5.28□□□□□ -1.56
CLN5-214ENST00000636705 LOC102724159A0A0B4J2E5 919 aa5.28□□□□□ -1.56
CLN5-214ENST00000636705 FAM205CA6NFA0 338 aa5.28□□□□□ -1.56
CLN5-214ENST00000636705 RAB11FIP3O75154 756 aa5.28□□□□□ -1.56
CLN5-214ENST00000636705 GCP02774 474 aa5.28□□□□□ -1.56
CLN5-214ENST00000636705 PWP2Q15269 919 aaKnown RBP5.28□□□□□ -1.56
CLN5-214ENST00000636705 QPCTQ16769 361 aa5.28□□□□□ -1.56
CLN5-214ENST00000636705 VARS2Q5ST30 1063 aaKnown RBP5.28□□□□□ -1.56
CLN5-214ENST00000636705 TOM1L2Q6ZVM7 507 aa5.28□□□□□ -1.56
CLN5-214ENST00000636705 BCL2L12Q9HB09 334 aa5.28□□□□□ -1.56
CLN5-214ENST00000636705 ZMIZ1Q9ULJ6 1067 aa5.28□□□□□ -1.56
CLN5-214ENST00000636705 CRB1P82279 1406 aa5.28□□□□□ -1.56
CLN5-214ENST00000636705 POLR3AO14802 1390 aaPredicted RBP5.28□□□□□ -1.56
CLN5-214ENST00000636705 PLCH1Q4KWH8 1693 aa5.27□□□□□ -1.57
CLN5-214ENST00000636705 SCNN1AP37088 669 aa5.27□□□□□ -1.57
CLN5-214ENST00000636705 SLC15A2Q16348 729 aa5.27□□□□□ -1.57
CLN5-214ENST00000636705 TMEM164Q5U3C3 297 aa5.27□□□□□ -1.57
CLN5-214ENST00000636705 GPATCH3Q96I76 525 aa5.27□□□□□ -1.57
CLN5-214ENST00000636705 HS3ST6Q96QI5 342 aa5.27□□□□□ -1.57
CLN5-214ENST00000636705 SYT17Q9BSW7 474 aa5.27□□□□□ -1.57
CLN5-214ENST00000636705 THSD7AQ9UPZ6 1657 aa5.27□□□□□ -1.57
CLN5-214ENST00000636705 AATKQ6ZMQ8 1374 aa5.27□□□□□ -1.57
CLN5-214ENST00000636705 SERPINB4P48594 390 aa5.27□□□□□ -1.57
CLN5-214ENST00000636705 CHRNA2Q15822 529 aa5.27□□□□□ -1.57
CLN5-214ENST00000636705 GPR162Q16538 588 aa5.27□□□□□ -1.57
CLN5-214ENST00000636705 FAM182BQ5T319 152 aa5.27□□□□□ -1.57
CLN5-214ENST00000636705 LARP1Q6PKG0 1096 aaKnown RBP5.27□□□□□ -1.57
CLN5-214ENST00000636705 CDK19Q9BWU1 502 aa5.27□□□□□ -1.57
CLN5-214ENST00000636705 NPDC1Q9NQX5 325 aaPredicted RBP5.27□□□□□ -1.57
CLN5-214ENST00000636705 BCCIPQ9P287 314 aaKnown RBP eCLIP5.27□□□□□ -1.57
CLN5-214ENST00000636705 ANKRD33BA6NCL7 494 aa5.26□□□□□ -1.57
CLN5-214ENST00000636705 ERCC3P19447 782 aa5.26□□□□□ -1.57
CLN5-214ENST00000636705 CSPP1Q1MSJ5 1256 aa5.26□□□□□ -1.57
CLN5-214ENST00000636705 CCER1Q8TC90 406 aaPredicted RBP5.26□□□□□ -1.57
CLN5-214ENST00000636705 RIPOR2Q9Y4F9 1068 aa5.26□□□□□ -1.57
CLN5-214ENST00000636705 PPME1Q9Y570 386 aa5.26□□□□□ -1.57
CLN5-214ENST00000636705 MAFBQ9Y5Q3 323 aaPredicted RBP5.26□□□□□ -1.57
CLN5-214ENST00000636705 USP19O94966 1318 aa5.26□□□□□ -1.57
CLN5-214ENST00000636705 ACEP12821 1306 aa5.26□□□□□ -1.57
CLN5-214ENST00000636705 CCDC7Q96M83 1385 aa5.26□□□□□ -1.57
CLN5-214ENST00000636705 PTPREP23469 700 aa5.26□□□□□ -1.57
CLN5-214ENST00000636705 SLC27A3Q5K4L6 730 aa5.26□□□□□ -1.57
CLN5-214ENST00000636705 DCAF11Q8TEB1 546 aa5.26□□□□□ -1.57
CLN5-214ENST00000636705 DNAJC2Q99543 621 aaKnown RBP5.26□□□□□ -1.57
CLN5-214ENST00000636705 CARD10Q9BWT7 1032 aa5.26□□□□□ -1.57
CLN5-214ENST00000636705 ALG2Q9H553 416 aa5.26□□□□□ -1.57
CLN5-214ENST00000636705 BRWD3Q6RI45 1802 aa5.25□□□□□ -1.57
CLN5-214ENST00000636705 AP1G2O75843 785 aa5.25□□□□□ -1.57
CLN5-214ENST00000636705 TXNRD1Q16881 649 aa5.25□□□□□ -1.57
CLN5-214ENST00000636705 C6orf132Q5T0Z8 1188 aa5.25□□□□□ -1.57
CLN5-214ENST00000636705 PRR7Q8TB68 274 aa5.25□□□□□ -1.57
CLN5-214ENST00000636705 ADAM33Q9BZ11 813 aa5.25□□□□□ -1.57
CLN5-214ENST00000636705 SUGT1Q9Y2Z0 365 aa5.25□□□□□ -1.57
CLN5-214ENST00000636705 SOWAHDA6NJG2 315 aa5.25□□□□□ -1.57
CLN5-214ENST00000636705 ARHGAP33O14559 1287 aa5.25□□□□□ -1.57
CLN5-214ENST00000636705 MAP3K7O43318 606 aa5.25□□□□□ -1.57
CLN5-214ENST00000636705 USP17L8P0C7I0 530 aa5.25□□□□□ -1.57
CLN5-214ENST00000636705 MARSP56192 900 aaKnown RBP5.25□□□□□ -1.57
CLN5-214ENST00000636705 C9orf131Q5VYM1 1079 aa5.25□□□□□ -1.57
CLN5-214ENST00000636705 RBM46Q8TBY0 533 aaKnown RBP5.25□□□□□ -1.57
CLN5-214ENST00000636705 FHDC1Q9C0D6 1143 aaPredicted RBP5.25□□□□□ -1.57
CLN5-214ENST00000636705 HMX1Q9NP08 348 aaPredicted RBP5.25□□□□□ -1.57
CLN5-214ENST00000636705 WDR17Q8IZU2 1322 aa5.25□□□□□ -1.57
CLN5-214ENST00000636705 PRR36Q9H6K5 1346 aa5.25□□□□□ -1.57
CLN5-214ENST00000636705 NRAPQ86VF7 1730 aa5.25□□□□□ -1.57
CLN5-214ENST00000636705 POTEGQ6S5H5 508 aa5.24□□□□□ -1.57
CLN5-214ENST00000636705 FLAD1Q8NFF5 587 aa5.24□□□□□ -1.57
CLN5-214ENST00000636705 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.24□□□□□ -1.57
CLN5-214ENST00000636705 TTC21AQ8NDW8 1320 aa5.24□□□□□ -1.57
CLN5-214ENST00000636705 POTEB3A0JP26 581 aa5.24□□□□□ -1.57
CLN5-214ENST00000636705 POTEMA6NI47 508 aa5.24□□□□□ -1.57
CLN5-214ENST00000636705 CLSTN1O94985 981 aa5.24□□□□□ -1.57
CLN5-214ENST00000636705 ZBTB7AO95365 584 aa5.24□□□□□ -1.57
CLN5-214ENST00000636705 VAMP1P23763 118 aa5.24□□□□□ -1.57
CLN5-214ENST00000636705 SF3A1Q15459 793 aaKnown RBP5.24□□□□□ -1.57
CLN5-214ENST00000636705 TSNAXIP1Q2TAA8 658 aa5.24□□□□□ -1.57
CLN5-214ENST00000636705 POTEBQ6S5H4 581 aa5.24□□□□□ -1.57
CLN5-214ENST00000636705 TBC1D9Q6ZT07 1266 aa5.24□□□□□ -1.57
CLN5-214ENST00000636705 RIC3Q7Z5B4 369 aa5.24□□□□□ -1.57
CLN5-214ENST00000636705 SLC4A5Q9BY07 1137 aa5.24□□□□□ -1.57
CLN5-214ENST00000636705 SBNO2Q9Y2G9 1366 aa5.24□□□□□ -1.57
CLN5-214ENST00000636705 PPP1R3GB7ZBB8 358 aa5.23□□□□□ -1.57
CLN5-214ENST00000636705 RTL5Q5HYW3 569 aaPredicted RBP5.23□□□□□ -1.57
CLN5-214ENST00000636705 VTI1AQ96AJ9 217 aa5.23□□□□□ -1.57
CLN5-214ENST00000636705 IFT172Q9UG01 1749 aa5.23□□□□□ -1.57
CLN5-214ENST00000636705 ALS2Q96Q42 1657 aa5.23□□□□□ -1.57
CLN5-214ENST00000636705 EVC2Q86UK5 1308 aa5.23□□□□□ -1.57
CLN5-214ENST00000636705 METTL3Q86U44 580 aaKnown RBP5.23□□□□□ -1.57
CLN5-214ENST00000636705 LNPKQ9C0E8 428 aa5.23□□□□□ -1.57
CLN5-214ENST00000636705 KLHL42Q9P2K6 505 aa5.23□□□□□ -1.57
CLN5-214ENST00000636705 RBM27Q9P2N5 1060 aaKnown RBP5.23□□□□□ -1.57
CLN5-214ENST00000636705 COL5A2P05997 1499 aaPredicted RBP5.22□□□□□ -1.57
CLN5-214ENST00000636705 NUTM2GQ5VZR2 741 aa5.22□□□□□ -1.57
CLN5-214ENST00000636705 FBXO33Q7Z6M2 555 aa5.22□□□□□ -1.57
CLN5-214ENST00000636705 RGPD3A6NKT7 1758 aaPredicted RBP5.22□□□□□ -1.57
CLN5-214ENST00000636705 RGPD4Q7Z3J3 1758 aa5.22□□□□□ -1.57
CLN5-214ENST00000636705 TNS1Q9HBL0 1735 aaKnown RBP5.22□□□□□ -1.57
CLN5-214ENST00000636705 TRPM3Q9HCF6 1732 aaPredicted RBP5.22□□□□□ -1.57
CLN5-214ENST00000636705 CENPJQ9HC77 1338 aaPredicted RBP5.22□□□□□ -1.57
CLN5-214ENST00000636705 SSFA2P28290 1259 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms