RNA–Protein interactions for RNA: ENST00000636647.1

CHRNA7-218, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 917 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-218ENST00000636647 ERC2O15083 957 aa6.15□□□□□ -1.42
CHRNA7-218ENST00000636647 NCLP19338 710 aaKnown RBP6.15□□□□□ -1.42
CHRNA7-218ENST00000636647 NASPP49321 788 aaPredicted RBP6.15□□□□□ -1.42
CHRNA7-218ENST00000636647 PRIM1P49642 420 aaKnown RBP6.15□□□□□ -1.42
CHRNA7-218ENST00000636647 PDE1AP54750 535 aa6.15□□□□□ -1.42
CHRNA7-218ENST00000636647 NUCB2P80303 420 aa6.15□□□□□ -1.42
CHRNA7-218ENST00000636647 ZSCAN23Q3MJ62 389 aa6.15□□□□□ -1.42
CHRNA7-218ENST00000636647 FOXD4L5Q5VV16 416 aaPredicted RBP6.15□□□□□ -1.42
CHRNA7-218ENST00000636647 CAVIN1Q6NZI2 390 aaKnown RBP6.15□□□□□ -1.42
CHRNA7-218ENST00000636647 KRT28Q7Z3Y7 464 aa6.15□□□□□ -1.42
CHRNA7-218ENST00000636647 ZNF526Q8TF50 670 aaPredicted RBP6.15□□□□□ -1.42
CHRNA7-218ENST00000636647 FOXD4L4Q8WXT5 416 aaPredicted RBP6.15□□□□□ -1.42
CHRNA7-218ENST00000636647 CAMKK2Q96RR4 588 aa6.15□□□□□ -1.42
CHRNA7-218ENST00000636647 OSBPL3Q9H4L5 887 aa6.15□□□□□ -1.42
CHRNA7-218ENST00000636647 STRN4Q9NRL3 753 aa6.15□□□□□ -1.42
CHRNA7-218ENST00000636647 EXOC6BQ9Y2D4 811 aa6.15□□□□□ -1.42
CHRNA7-218ENST00000636647 PTPRCP08575 1304 aa6.15□□□□□ -1.43
CHRNA7-218ENST00000636647 USP31Q70CQ4 1352 aa6.15□□□□□ -1.43
CHRNA7-218ENST00000636647 SSH2Q76I76 1423 aa6.15□□□□□ -1.43
CHRNA7-218ENST00000636647 PXDNQ92626 1479 aa6.15□□□□□ -1.43
CHRNA7-218ENST00000636647 TNS1Q9HBL0 1735 aaKnown RBP6.14□□□□□ -1.43
CHRNA7-218ENST00000636647 PNMA6EA0A0J9YXQ4 647 aa6.14□□□□□ -1.43
CHRNA7-218ENST00000636647 SOX12O15370 315 aa6.14□□□□□ -1.43
CHRNA7-218ENST00000636647 ATP8B2P98198 1209 aa6.14□□□□□ -1.43
CHRNA7-218ENST00000636647 CCDC173Q0VFZ6 552 aa6.14□□□□□ -1.43
CHRNA7-218ENST00000636647 SMYD5Q6GMV2 418 aa6.14□□□□□ -1.43
CHRNA7-218ENST00000636647 SLC4A10Q6U841 1118 aa6.14□□□□□ -1.43
CHRNA7-218ENST00000636647 EYA1Q99502 592 aa6.14□□□□□ -1.43
CHRNA7-218ENST00000636647 ESYT1Q9BSJ8 1104 aa6.14□□□□□ -1.43
CHRNA7-218ENST00000636647 FHDC1Q9C0D6 1143 aaPredicted RBP6.14□□□□□ -1.43
CHRNA7-218ENST00000636647 IL25Q9H293 177 aa6.14□□□□□ -1.43
CHRNA7-218ENST00000636647 CWC22Q9HCG8 908 aaKnown RBP6.14□□□□□ -1.43
CHRNA7-218ENST00000636647 TMEM63CQ9P1W3 806 aa6.14□□□□□ -1.43
CHRNA7-218ENST00000636647 IBTKQ9P2D0 1353 aaPredicted RBP6.14□□□□□ -1.43
CHRNA7-218ENST00000636647 CHMLP26374 656 aa6.13□□□□□ -1.43
CHRNA7-218ENST00000636647 CCT4P50991 539 aaKnown RBP6.13□□□□□ -1.43
CHRNA7-218ENST00000636647 CUL4AQ13619 759 aa6.13□□□□□ -1.43
CHRNA7-218ENST00000636647 FAM196AQ6ZSG2 479 aa6.13□□□□□ -1.43
CHRNA7-218ENST00000636647 TMX3Q96JJ7 454 aa6.13□□□□□ -1.43
CHRNA7-218ENST00000636647 TSPYL4Q9UJ04 414 aa6.13□□□□□ -1.43
CHRNA7-218ENST00000636647 USP6P35125 1406 aa6.13□□□□□ -1.43
CHRNA7-218ENST00000636647 UTRNP46939 3433 aa6.13□□□□□ -1.43
CHRNA7-218ENST00000636647 GOLGA6L22H0YM25 854 aa6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 RGPD8O14715 1765 aaPredicted RBP6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 ARHGEF10O15013 1369 aa6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 GADD45BO75293 160 aaPredicted RBP6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 OFD1O75665 1012 aa6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 BRD1O95696 1058 aa6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 GNAI2P04899 355 aa6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 NEK4P51957 841 aa6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 PSME1Q06323 249 aa6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 SPATA31A3Q5VYP0 1347 aa6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 ZSCAN30Q86W11 494 aa6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 IL17REQ8NFR9 667 aa6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 TRIM44Q96DX7 344 aaPredicted RBP6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 IL17RAQ96F46 866 aa6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 PDLIM2Q96JY6 352 aa6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 PDGFDQ9GZP0 370 aaPredicted RBP6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 FMN2Q9NZ56 1722 aa6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 STAP2Q9UGK3 403 aa6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 ARIH1Q9Y4X5 557 aaPredicted RBP6.12□□□□□ -1.43
CHRNA7-218ENST00000636647 NUP188Q5SRE5 1749 aa6.11□□□□□ -1.43
CHRNA7-218ENST00000636647 SYCE3A1L190 88 aa6.11□□□□□ -1.43
CHRNA7-218ENST00000636647 ST18O60284 1047 aa6.11□□□□□ -1.43
CHRNA7-218ENST00000636647 ONECUT3O60422 494 aaPredicted RBP6.11□□□□□ -1.43
CHRNA7-218ENST00000636647 DTNBO60941 627 aa6.11□□□□□ -1.43
CHRNA7-218ENST00000636647 REC8O95072 547 aa6.11□□□□□ -1.43
CHRNA7-218ENST00000636647 MAP4K4O95819 1239 aaPredicted RBP6.11□□□□□ -1.43
CHRNA7-218ENST00000636647 MNX1P50219 401 aaPredicted RBP6.11□□□□□ -1.43
CHRNA7-218ENST00000636647 FLIIQ13045 1269 aa6.11□□□□□ -1.43
CHRNA7-218ENST00000636647 LRSAM1Q6UWE0 723 aa6.11□□□□□ -1.43
CHRNA7-218ENST00000636647 NOL8Q76FK4 1167 aaKnown RBP6.11□□□□□ -1.43
CHRNA7-218ENST00000636647 NUTM1Q86Y26 1132 aa6.11□□□□□ -1.43
CHRNA7-218ENST00000636647 PKNOX2Q96KN3 472 aa6.11□□□□□ -1.43
CHRNA7-218ENST00000636647 SYT17Q9BSW7 474 aa6.11□□□□□ -1.43
CHRNA7-218ENST00000636647 USP44Q9H0E7 712 aa6.11□□□□□ -1.43
CHRNA7-218ENST00000636647 RNF39Q9H2S5 420 aa6.11□□□□□ -1.43
CHRNA7-218ENST00000636647 LRRFIP2Q9Y608 721 aaKnown RBP6.11□□□□□ -1.43
CHRNA7-218ENST00000636647 FAM208AQ9UK61 1670 aaKnown RBP6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 LRRC37A3O60309 1634 aa6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 TNS3Q68CZ2 1445 aa6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 SBNO1A3KN83 1393 aa6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 KDRP35968 1356 aa6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 IGSF1Q8N6C5 1336 aa6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 HMMRO75330 724 aa6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 TPM2P07951 284 aa6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 MX1P20591 662 aa6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 CHRNA2Q15822 529 aa6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 CASC1Q6TDU7 716 aa6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 KIAA1211Q6ZU35 1233 aa6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 RASEFQ8IZ41 740 aa6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 RILPL2Q969X0 211 aa6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 MFRPQ9BY79 579 aa6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 LRRCC1Q9C099 1032 aa6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 PHAXQ9H814 394 aaKnown RBP6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 GDPD2Q9HCC8 539 aa6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 IL1RAPL2Q9NP60 686 aa6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 PRDM11Q9NQV5 511 aa6.1□□□□□ -1.43
CHRNA7-218ENST00000636647 DISP2A7MBM2 1401 aa6.09□□□□□ -1.43
CHRNA7-218ENST00000636647 RPAP1Q9BWH6 1393 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms