RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 LAMB2P55268 1798 aa6.84□□□□□ -1.31
CHD2-224ENST00000636410 ATP10DQ9P241 1426 aa6.84□□□□□ -1.32
CHD2-224ENST00000636410 MAP3K15Q6ZN16 1313 aa6.83□□□□□ -1.32
CHD2-224ENST00000636410 DLEC1Q9Y238 1755 aa6.83□□□□□ -1.32
CHD2-224ENST00000636410 ERVV-1B6SEH8 477 aa6.83□□□□□ -1.32
CHD2-224ENST00000636410 CAMTA2O94983 1202 aa6.83□□□□□ -1.32
CHD2-224ENST00000636410 FKBP8Q14318 412 aa6.83□□□□□ -1.32
CHD2-224ENST00000636410 MSL1Q68DK7 614 aa6.83□□□□□ -1.32
CHD2-224ENST00000636410 TTLL7Q6ZT98 887 aa6.83□□□□□ -1.32
CHD2-224ENST00000636410 COPS6Q7L5N1 327 aa6.83□□□□□ -1.32
CHD2-224ENST00000636410 NLGN1Q8N2Q7 840 aa6.83□□□□□ -1.32
CHD2-224ENST00000636410 XAGE3Q8WTP9 111 aa6.83□□□□□ -1.32
CHD2-224ENST00000636410 ARXQ96QS3 562 aa6.83□□□□□ -1.32
CHD2-224ENST00000636410 SGIP1Q9BQI5 828 aa6.83□□□□□ -1.32
CHD2-224ENST00000636410 PHAXQ9H814 394 aaKnown RBP6.83□□□□□ -1.32
CHD2-224ENST00000636410 BCL2L12Q9HB09 334 aa6.83□□□□□ -1.32
CHD2-224ENST00000636410 SPON1Q9HCB6 807 aa6.83□□□□□ -1.32
CHD2-224ENST00000636410 ZNF652Q9Y2D9 606 aa6.83□□□□□ -1.32
CHD2-224ENST00000636410 KIAA1551Q9HCM1 1747 aa6.83□□□□□ -1.32
CHD2-224ENST00000636410 ANKRD31Q8N7Z5 1873 aa6.82□□□□□ -1.32
CHD2-224ENST00000636410 PXDNLA1KZ92 1463 aa6.82□□□□□ -1.32
CHD2-224ENST00000636410 TCERG1O14776 1098 aaKnown RBP6.82□□□□□ -1.32
CHD2-224ENST00000636410 SLC4A2P04920 1241 aa6.82□□□□□ -1.32
CHD2-224ENST00000636410 POLD1P28340 1107 aa6.82□□□□□ -1.32
CHD2-224ENST00000636410 PTGER2P43116 358 aa6.82□□□□□ -1.32
CHD2-224ENST00000636410 AIMP1Q12904 312 aaKnown RBP6.82□□□□□ -1.32
CHD2-224ENST00000636410 ALDH1L2Q3SY69 923 aa6.82□□□□□ -1.32
CHD2-224ENST00000636410 CLEC4GQ6UXB4 293 aa6.82□□□□□ -1.32
CHD2-224ENST00000636410 PLBD2Q8NHP8 589 aa6.82□□□□□ -1.32
CHD2-224ENST00000636410 ZBTB3Q9H5J0 574 aa6.82□□□□□ -1.32
CHD2-224ENST00000636410 ATF5Q9Y2D1 282 aaPredicted RBP6.82□□□□□ -1.32
CHD2-224ENST00000636410 CARMIL3Q8ND23 1372 aa6.82□□□□□ -1.32
CHD2-224ENST00000636410 IBTKQ9P2D0 1353 aaPredicted RBP6.82□□□□□ -1.32
CHD2-224ENST00000636410 COL11A2P13942 1736 aaPredicted RBP6.81□□□□□ -1.32
CHD2-224ENST00000636410 DDX60Q8IY21 1712 aaKnown RBP6.81□□□□□ -1.32
CHD2-224ENST00000636410 TNRC6CQ9HCJ0 1690 aaKnown RBP6.81□□□□□ -1.32
CHD2-224ENST00000636410 DDX58O95786 925 aaKnown RBP6.81□□□□□ -1.32
CHD2-224ENST00000636410 MMP10P09238 476 aa6.81□□□□□ -1.32
CHD2-224ENST00000636410 TM4SF1P30408 202 aa6.81□□□□□ -1.32
CHD2-224ENST00000636410 FLIIQ13045 1269 aa6.81□□□□□ -1.32
CHD2-224ENST00000636410 HLFQ16534 295 aa6.81□□□□□ -1.32
CHD2-224ENST00000636410 HSP90AB3PQ58FF7 597 aa6.81□□□□□ -1.32
CHD2-224ENST00000636410 TBC1D9BQ66K14 1250 aa6.81□□□□□ -1.32
CHD2-224ENST00000636410 GIGYF2Q6Y7W6 1299 aaKnown RBP6.81□□□□□ -1.32
CHD2-224ENST00000636410 ANKRD13DQ6ZTN6 518 aa6.81□□□□□ -1.32
CHD2-224ENST00000636410 G2E3Q7L622 706 aa6.81□□□□□ -1.32
CHD2-224ENST00000636410 SSH1Q8WYL5 1049 aa6.81□□□□□ -1.32
CHD2-224ENST00000636410 SMC4Q9NTJ3 1288 aa6.81□□□□□ -1.32
CHD2-224ENST00000636410 PARP3Q9Y6F1 533 aa6.81□□□□□ -1.32
CHD2-224ENST00000636410 C10orf71Q711Q0 1435 aa6.81□□□□□ -1.32
CHD2-224ENST00000636410 ADCY9O60503 1353 aa6.81□□□□□ -1.32
CHD2-224ENST00000636410 POLRMTO00411 1230 aaKnown RBP6.8□□□□□ -1.32
CHD2-224ENST00000636410 BRCA1P38398 1863 aaKnown RBP6.8□□□□□ -1.32
CHD2-224ENST00000636410 RARSP54136 660 aaKnown RBP6.8□□□□□ -1.32
CHD2-224ENST00000636410 BRPF1P55201 1214 aaPredicted RBP6.8□□□□□ -1.32
CHD2-224ENST00000636410 DDR1Q08345 913 aa6.8□□□□□ -1.32
CHD2-224ENST00000636410 FKBP5Q13451 457 aaPredicted RBP6.8□□□□□ -1.32
CHD2-224ENST00000636410 NFIXQ14938 502 aa6.8□□□□□ -1.32
CHD2-224ENST00000636410 BICDL1Q6ZP65 573 aa6.8□□□□□ -1.32
CHD2-224ENST00000636410 MRPL50Q8N5N7 158 aaKnown RBP6.8□□□□□ -1.32
CHD2-224ENST00000636410 SETDB2Q96T68 719 aa6.8□□□□□ -1.32
CHD2-224ENST00000636410 BCL2L13Q9BXK5 485 aa6.8□□□□□ -1.32
CHD2-224ENST00000636410 PTPRCP08575 1304 aa6.79□□□□□ -1.32
CHD2-224ENST00000636410 UBN2Q6ZU65 1347 aa6.79□□□□□ -1.32
CHD2-224ENST00000636410 KIF16BQ96L93 1317 aa6.79□□□□□ -1.32
CHD2-224ENST00000636410 CACNA1SQ13698 1873 aa6.79□□□□□ -1.32
CHD2-224ENST00000636410 RIC1Q4ADV7 1423 aa6.79□□□□□ -1.32
CHD2-224ENST00000636410 PI4KAP2A4QPH2 592 aa6.79□□□□□ -1.32
CHD2-224ENST00000636410 PARP10Q53GL7 1025 aa6.79□□□□□ -1.32
CHD2-224ENST00000636410 KSR2Q6VAB6 950 aa6.79□□□□□ -1.32
CHD2-224ENST00000636410 RIC3Q7Z5B4 369 aa6.79□□□□□ -1.32
CHD2-224ENST00000636410 ZNF34Q8IZ26 560 aa6.79□□□□□ -1.32
CHD2-224ENST00000636410 PI4KAP1Q8N8J0 262 aa6.79□□□□□ -1.32
CHD2-224ENST00000636410 PPP1R1BQ9UD71 204 aaPredicted RBP6.79□□□□□ -1.32
CHD2-224ENST00000636410 NIP7Q9Y221 180 aaKnown RBP eCLIP6.79□□□□□ -1.32
CHD2-224ENST00000636410 MAP3K2Q9Y2U5 619 aa6.79□□□□□ -1.32
CHD2-224ENST00000636410 MYH3P11055 1940 aa6.79□□□□□ -1.32
CHD2-224ENST00000636410 RNF123Q5XPI4 1314 aa6.78□□□□□ -1.32
CHD2-224ENST00000636410 SERPINB2P05120 415 aa6.78□□□□□ -1.32
CHD2-224ENST00000636410 GPTP24298 496 aa6.78□□□□□ -1.32
CHD2-224ENST00000636410 NEXNQ0ZGT2 675 aa6.78□□□□□ -1.32
CHD2-224ENST00000636410 TCIRG1Q13488 830 aa6.78□□□□□ -1.32
CHD2-224ENST00000636410 PRR5LQ6MZQ0 368 aa6.78□□□□□ -1.32
CHD2-224ENST00000636410 PPP1R42Q7Z4L9 355 aa6.78□□□□□ -1.32
CHD2-224ENST00000636410 CNBD1Q8NA66 436 aa6.78□□□□□ -1.32
CHD2-224ENST00000636410 DNAAF4Q8WXU2 420 aa6.78□□□□□ -1.32
CHD2-224ENST00000636410 ISCA1Q9BUE6 129 aa6.78□□□□□ -1.32
CHD2-224ENST00000636410 METTL22Q9BUU2 404 aaPredicted RBP6.78□□□□□ -1.32
CHD2-224ENST00000636410 NYXQ9GZU5 481 aa6.78□□□□□ -1.32
CHD2-224ENST00000636410 NPHP1O15259 732 aa6.77□□□□□ -1.33
CHD2-224ENST00000636410 BCAR3O75815 825 aa6.77□□□□□ -1.33
CHD2-224ENST00000636410 NTSR2O95665 410 aa6.77□□□□□ -1.33
CHD2-224ENST00000636410 ST5P78524 1137 aa6.77□□□□□ -1.33
CHD2-224ENST00000636410 TRIM28Q13263 835 aaKnown RBP6.77□□□□□ -1.33
CHD2-224ENST00000636410 SUSD4Q5VX71 490 aa6.77□□□□□ -1.33
CHD2-224ENST00000636410 TPTE2Q6XPS3 522 aa6.77□□□□□ -1.33
CHD2-224ENST00000636410 NLRP10Q86W26 655 aa6.77□□□□□ -1.33
CHD2-224ENST00000636410 NBPF5PQ86XG9 351 aaPredicted RBP6.77□□□□□ -1.33
CHD2-224ENST00000636410 CCDC191Q8NCU4 936 aa6.77□□□□□ -1.33
CHD2-224ENST00000636410 ARHGAP45Q92619 1136 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms