RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 IGSF1Q8N6C5 1336 aa17.65■□□□□ 0.42
CACNA1A-220ENST00000635988 GLRX3O76003 335 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-220ENST00000635988 KRT85P78386 507 aa17.65■□□□□ 0.42
CACNA1A-220ENST00000635988 CCDC171Q6TFL3 1326 aa17.65■□□□□ 0.42
CACNA1A-220ENST00000635988 LRRC37A3O60309 1634 aa17.65■□□□□ 0.42
CACNA1A-220ENST00000635988 GNAT3A8MTJ3 354 aa17.64■□□□□ 0.41
CACNA1A-220ENST00000635988 MAP4K4O95819 1239 aaPredicted RBP17.64■□□□□ 0.41
CACNA1A-220ENST00000635988 ATP2B3Q16720 1220 aa17.64■□□□□ 0.41
CACNA1A-220ENST00000635988 CWC27Q6UX04 472 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-220ENST00000635988 KCNB2Q92953 911 aa17.64■□□□□ 0.41
CACNA1A-220ENST00000635988 ZSWIM6Q9HCJ5 1215 aa17.64■□□□□ 0.41
CACNA1A-220ENST00000635988 TTC21AQ8NDW8 1320 aa17.64■□□□□ 0.41
CACNA1A-220ENST00000635988 PDCP20941 246 aa17.64■□□□□ 0.41
CACNA1A-220ENST00000635988 SPC24Q8NBT2 197 aa17.64■□□□□ 0.41
CACNA1A-220ENST00000635988 NUP62CLQ9H1M0 184 aa17.64■□□□□ 0.41
CACNA1A-220ENST00000635988 ZHX1Q9UKY1 873 aaPredicted RBP17.63■□□□□ 0.41
CACNA1A-220ENST00000635988 SRGAP3O43295 1099 aa17.63■□□□□ 0.41
CACNA1A-220ENST00000635988 JAKMIP1Q96N16 626 aaKnown RBP17.63■□□□□ 0.41
CACNA1A-220ENST00000635988 CHMP4AQ9BY43 222 aa17.63■□□□□ 0.41
CACNA1A-220ENST00000635988 TOPAZ1Q8N9V7 1692 aa17.62■□□□□ 0.41
CACNA1A-220ENST00000635988 VPS37CA5D8V6 355 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-220ENST00000635988 LARGE1O95461 756 aa17.62■□□□□ 0.41
CACNA1A-220ENST00000635988 SPG7Q9UQ90 795 aa17.62■□□□□ 0.41
CACNA1A-220ENST00000635988 FMN2Q9NZ56 1722 aa17.62■□□□□ 0.41
CACNA1A-220ENST00000635988 CRYBG1Q9Y4K1 1723 aa17.62■□□□□ 0.41
CACNA1A-220ENST00000635988 ZKSCAN1P17029 563 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-220ENST00000635988 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-220ENST00000635988 LARP6Q9BRS8 491 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-220ENST00000635988 TYRO3Q06418 890 aa17.61■□□□□ 0.41
CACNA1A-220ENST00000635988 TAF7Q15545 349 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-220ENST00000635988 NECTIN2Q92692 538 aa17.61■□□□□ 0.41
CACNA1A-220ENST00000635988 EYA1Q99502 592 aa17.61■□□□□ 0.41
CACNA1A-220ENST00000635988 FAM177BA6PVY3 158 aa17.61■□□□□ 0.41
CACNA1A-220ENST00000635988 LARP1BQ659C4 914 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-220ENST00000635988 SMTNL1A8MU46 457 aa17.6■□□□□ 0.41
CACNA1A-220ENST00000635988 SCAND2PQ9GZW5 306 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-220ENST00000635988 DDX19AQ9NUU7 478 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-220ENST00000635988 MRVI1Q9Y6F6 885 aa17.6■□□□□ 0.41
CACNA1A-220ENST00000635988 PTGS1P23219 599 aa17.6■□□□□ 0.41
CACNA1A-220ENST00000635988 HDGFL1Q5TGJ6 251 aa17.6■□□□□ 0.41
CACNA1A-220ENST00000635988 GPATCH3Q96I76 525 aa17.6■□□□□ 0.41
CACNA1A-220ENST00000635988 AMPHP49418 695 aa17.59■□□□□ 0.41
CACNA1A-220ENST00000635988 TTC6Q86TZ1 520 aa17.59■□□□□ 0.41
CACNA1A-220ENST00000635988 TNMDQ9H2S6 317 aa17.59■□□□□ 0.41
CACNA1A-220ENST00000635988 PAXBP1Q9Y5B6 917 aa17.59■□□□□ 0.41
CACNA1A-220ENST00000635988 RIMS1Q86UR5 1692 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-220ENST00000635988 CPA1P15085 419 aa17.59■□□□□ 0.41
CACNA1A-220ENST00000635988 PSMA5P28066 241 aa17.59■□□□□ 0.41
CACNA1A-220ENST00000635988 PRPF40BQ6NWY9 871 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-220ENST00000635988 OSCARQ8IYS5 282 aa17.59■□□□□ 0.41
CACNA1A-220ENST00000635988 ROBO2Q9HCK4 1378 aa17.59■□□□□ 0.41
CACNA1A-220ENST00000635988 GOLGA6L4A6NEF3 574 aa17.58■□□□□ 0.41
CACNA1A-220ENST00000635988 SOX12O15370 315 aa17.58■□□□□ 0.41
CACNA1A-220ENST00000635988 CAVIN2O95810 425 aa17.58■□□□□ 0.41
CACNA1A-220ENST00000635988 ANKRD1Q15327 319 aa17.58■□□□□ 0.41
CACNA1A-220ENST00000635988 ME3Q16798 604 aa17.58■□□□□ 0.41
CACNA1A-220ENST00000635988 CLASRPQ8N2M8 674 aaKnown RBP17.58■□□□□ 0.41
CACNA1A-220ENST00000635988 OGFRQ9NZT2 677 aa17.58■□□□□ 0.41
CACNA1A-220ENST00000635988 CEP170BQ9Y4F5 1589 aaPredicted RBP17.58■□□□□ 0.41
CACNA1A-220ENST00000635988 NPHP3Q7Z494 1330 aa17.58■□□□□ 0.4
CACNA1A-220ENST00000635988 NECTIN1Q15223 517 aa17.58■□□□□ 0.4
CACNA1A-220ENST00000635988 HIP1O00291 1037 aa17.57■□□□□ 0.4
CACNA1A-220ENST00000635988 PTH1RQ03431 593 aa17.57■□□□□ 0.4
CACNA1A-220ENST00000635988 ADCK5Q3MIX3 580 aa17.57■□□□□ 0.4
CACNA1A-220ENST00000635988 RBM43Q6ZSC3 357 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-220ENST00000635988 CCDC186Q7Z3E2 898 aa17.57■□□□□ 0.4
CACNA1A-220ENST00000635988 DRC7Q8IY82 874 aa17.57■□□□□ 0.4
CACNA1A-220ENST00000635988 ECHDC1Q9NTX5 307 aa17.57■□□□□ 0.4
CACNA1A-220ENST00000635988 PTPRUQ92729 1446 aa17.57■□□□□ 0.4
CACNA1A-220ENST00000635988 ADGRL3Q9HAR2 1447 aa17.57■□□□□ 0.4
CACNA1A-220ENST00000635988 U2AF2P26368 475 aaKnown RBP eCLIP17.57■□□□□ 0.4
CACNA1A-220ENST00000635988 OS9Q13438 667 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-220ENST00000635988 EVI5LQ96CN4 794 aa17.57■□□□□ 0.4
CACNA1A-220ENST00000635988 CBX8Q9HC52 389 aa17.57■□□□□ 0.4
CACNA1A-220ENST00000635988 LUZP1Q86V48 1076 aa17.56■□□□□ 0.4
CACNA1A-220ENST00000635988 PLA2G4DQ86XP0 818 aa17.56■□□□□ 0.4
CACNA1A-220ENST00000635988 ERC1Q8IUD2 1116 aa17.56■□□□□ 0.4
CACNA1A-220ENST00000635988 TDRD7Q8NHU6 1098 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-220ENST00000635988 CGNQ9P2M7 1197 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-220ENST00000635988 CHD2O14647 1828 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-220ENST00000635988 SPDYE4A6NLX3 237 aa17.56■□□□□ 0.4
CACNA1A-220ENST00000635988 LIG1P18858 919 aa17.56■□□□□ 0.4
CACNA1A-220ENST00000635988 ZNF75DP51815 510 aa17.56■□□□□ 0.4
CACNA1A-220ENST00000635988 ST3GAL1Q11201 340 aa17.56■□□□□ 0.4
CACNA1A-220ENST00000635988 IL17REQ8NFR9 667 aa17.56■□□□□ 0.4
CACNA1A-220ENST00000635988 TRIM5Q9C035 493 aa17.56■□□□□ 0.4
CACNA1A-220ENST00000635988 PHAXQ9H814 394 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-220ENST00000635988 NCBP1Q09161 790 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-220ENST00000635988 MTX1Q13505 466 aa17.55■□□□□ 0.4
CACNA1A-220ENST00000635988 ANO6Q4KMQ2 910 aa17.55■□□□□ 0.4
CACNA1A-220ENST00000635988 CLSTN2Q9H4D0 955 aa17.55■□□□□ 0.4
CACNA1A-220ENST00000635988 HDAC5Q9UQL6 1122 aa17.55■□□□□ 0.4
CACNA1A-220ENST00000635988 HOXB7P09629 217 aa17.55■□□□□ 0.4
CACNA1A-220ENST00000635988 ZSCAN25Q6NSZ9 544 aa17.55■□□□□ 0.4
CACNA1A-220ENST00000635988 SPATA32Q96LK8 384 aa17.55■□□□□ 0.4
CACNA1A-220ENST00000635988 ALDH8A1Q9H2A2 487 aaPredicted RBP17.55■□□□□ 0.4
CACNA1A-220ENST00000635988 DACT1Q9NYF0 836 aa17.55■□□□□ 0.4
CACNA1A-220ENST00000635988 NBPF7P0C2Y1 421 aaPredicted RBP17.54■□□□□ 0.4
CACNA1A-220ENST00000635988 TNNT1P13805 278 aa17.54■□□□□ 0.4
CACNA1A-220ENST00000635988 KCNJ4P48050 445 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms