RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 AACSQ86V21 672 aa11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 FMNL3Q8IVF7 1028 aa11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 GOLGA5Q8TBA6 731 aa11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 CCDC85AQ96PX6 553 aaPredicted RBP11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 CFAP45Q9UL16 551 aa11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 ZMYM4Q5VZL5 1548 aa11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 A0A1B0GUA9 196 aa11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 ZSCAN20P17040 1043 aaPredicted RBP11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 PRKAR2BP31323 418 aa11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 EIF5P55010 431 aaKnown RBP11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 NUCB1Q02818 461 aa11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 LMBRD1Q9NUN5 540 aa11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 IDH1O75874 414 aaKnown RBP11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 SLC4A2P04920 1241 aa11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 CASTP20810 708 aaKnown RBP11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 ANKLE2Q86XL3 938 aa11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 POTEDQ86YR6 584 aa11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 C17orf53Q8N3J3 647 aaPredicted RBP11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 VTI1AQ96AJ9 217 aa11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 MKNK2Q9HBH9 465 aa11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 ABCF2Q9UG63 623 aa11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 CTNNA3Q9UI47 895 aa11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 TSG101Q99816 390 aa11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 MRPS9P82933 396 aaKnown RBP11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 STX1AQ16623 288 aa11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 GIMAP6Q6P9H5 292 aa11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 SRCIN1Q9C0H9 1055 aa11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 SCAND2PQ9GZW5 306 aaPredicted RBP11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 CEP131Q9UPN4 1083 aa11.34□□□□□ -0.59
SPTAN1-228ENST00000635853 KIF5CO60282 957 aa11.33□□□□□ -0.6
SPTAN1-228ENST00000635853 ELF2Q15723 593 aa11.33□□□□□ -0.6
SPTAN1-228ENST00000635853 DZIP1Q86YF9 867 aaKnown RBP11.33□□□□□ -0.6
SPTAN1-228ENST00000635853 CEP126Q9P2H0 1117 aa11.33□□□□□ -0.6
SPTAN1-228ENST00000635853 SUPT6HQ7KZ85 1726 aaKnown RBP11.33□□□□□ -0.6
SPTAN1-228ENST00000635853 TERF2Q15554 542 aa11.33□□□□□ -0.6
SPTAN1-228ENST00000635853 SSX2IPQ9Y2D8 614 aa11.33□□□□□ -0.6
SPTAN1-228ENST00000635853 EBAG9O00559 213 aa11.33□□□□□ -0.6
SPTAN1-228ENST00000635853 CCT4P50991 539 aaKnown RBP11.33□□□□□ -0.6
SPTAN1-228ENST00000635853 TMEM57Q8N5G2 664 aa11.33□□□□□ -0.6
SPTAN1-228ENST00000635853 MPHOSPH6Q99547 160 aaKnown RBP11.33□□□□□ -0.6
SPTAN1-228ENST00000635853 GDPD2Q9HCC8 539 aa11.33□□□□□ -0.6
SPTAN1-228ENST00000635853 TUBB4BP68371 445 aa11.33□□□□□ -0.6
SPTAN1-228ENST00000635853 ICE2Q659A1 982 aa11.32□□□□□ -0.6
SPTAN1-228ENST00000635853 INSRP06213 1382 aa11.32□□□□□ -0.6
SPTAN1-228ENST00000635853 GOLGA1Q92805 767 aa11.32□□□□□ -0.6
SPTAN1-228ENST00000635853 SECISBP2LQ93073 1101 aaKnown RBP11.32□□□□□ -0.6
SPTAN1-228ENST00000635853 RPRD2Q5VT52 1461 aaKnown RBP11.32□□□□□ -0.6
SPTAN1-228ENST00000635853 METTL24Q5JXM2 366 aa11.32□□□□□ -0.6
SPTAN1-228ENST00000635853 PRAM1Q96QH2 718 aa11.32□□□□□ -0.6
SPTAN1-228ENST00000635853 TMOD3Q9NYL9 352 aa11.32□□□□□ -0.6
SPTAN1-228ENST00000635853 ANKRD36BQ8N2N9 1353 aa11.32□□□□□ -0.6
SPTAN1-228ENST00000635853 ANKRD30BQ9BXX2 1392 aa11.32□□□□□ -0.6
SPTAN1-228ENST00000635853 EFCAB5A4FU69 1503 aa11.32□□□□□ -0.6
SPTAN1-228ENST00000635853 MAP3K9P80192 1104 aa11.32□□□□□ -0.6
SPTAN1-228ENST00000635853 KIF1CO43896 1103 aaKnown RBP11.32□□□□□ -0.6
SPTAN1-228ENST00000635853 OAS2P29728 719 aaKnown RBP11.32□□□□□ -0.6
SPTAN1-228ENST00000635853 CTNNBL1Q8WYA6 563 aaPredicted RBP11.32□□□□□ -0.6
SPTAN1-228ENST00000635853 PRDM2Q13029 1718 aa11.32□□□□□ -0.6
SPTAN1-228ENST00000635853 HDXQ7Z353 690 aa11.31□□□□□ -0.6
SPTAN1-228ENST00000635853 RSRC1Q96IZ7 334 aaKnown RBP11.31□□□□□ -0.6
SPTAN1-228ENST00000635853 YY1AP1Q9H869 796 aa11.31□□□□□ -0.6
SPTAN1-228ENST00000635853 ZNF165P49910 485 aa11.31□□□□□ -0.6
SPTAN1-228ENST00000635853 IMMTQ16891 758 aaKnown RBP11.31□□□□□ -0.6
SPTAN1-228ENST00000635853 PDRG1Q9NUG6 133 aa11.31□□□□□ -0.6
SPTAN1-228ENST00000635853 PCDHB15Q9Y5E8 787 aa11.31□□□□□ -0.6
SPTAN1-228ENST00000635853 ANO6Q4KMQ2 910 aa11.31□□□□□ -0.6
SPTAN1-228ENST00000635853 SULT6B1Q6IMI4 303 aa11.31□□□□□ -0.6
SPTAN1-228ENST00000635853 CKAP2LQ8IYA6 745 aa11.31□□□□□ -0.6
SPTAN1-228ENST00000635853 CEP112Q8N8E3 955 aa11.31□□□□□ -0.6
SPTAN1-228ENST00000635853 CLEC11AQ9Y240 323 aa11.31□□□□□ -0.6
SPTAN1-228ENST00000635853 MRVI1Q9Y6F6 885 aa11.31□□□□□ -0.6
SPTAN1-228ENST00000635853 TMC6Q7Z403 805 aa11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 TTC16Q8NEE8 873 aa11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 PARD3Q8TEW0 1356 aa11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 ADAMTS2O95450 1211 aa11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 ZSCAN22P10073 491 aaPredicted RBP11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 SLF2Q8IX21 1173 aa11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 RRP15Q9Y3B9 282 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 STX6O43752 255 aa11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 TMX3Q96JJ7 454 aa11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 CEP63Q96MT8 703 aa11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 CCDC113Q9H0I3 377 aa11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 SETSIPP0DME0 302 aa11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 CTNNA2P26232 953 aa11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 LARP1Q6PKG0 1096 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 JRKLQ9Y4A0 524 aa11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 ATAD2Q6PL18 1390 aa11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 ARHGAP5Q13017 1502 aa11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 CCDC196A0A1B0GTZ2 297 aa11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 MAP2K1Q02750 393 aaPredicted RBP11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 DNAJC21Q5F1R6 531 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 TSR2Q969E8 191 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-228ENST00000635853 MINDY4BA8MYZ0 360 aa11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 ZNF354CQ86Y25 554 aa11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 CNPY4Q8N129 248 aa11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 NEK11Q8NG66 645 aa11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 DNAI1Q9UI46 699 aa11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 ZNF444Q8N0Y2 327 aaPredicted RBP11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 CDK19Q9BWU1 502 aa11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 GIGYF2Q6Y7W6 1299 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms