RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 IL6STP40189 918 aaPredicted RBP10.96□□□□□ -0.65
CDKL5-209ENST00000635828 RTL5Q5HYW3 569 aaPredicted RBP10.96□□□□□ -0.65
CDKL5-209ENST00000635828 CCDC30Q5VVM6 783 aa10.96□□□□□ -0.65
CDKL5-209ENST00000635828 TBC1D9BQ66K14 1250 aa10.96□□□□□ -0.65
CDKL5-209ENST00000635828 FRAT1Q92837 279 aaPredicted RBP10.96□□□□□ -0.65
CDKL5-209ENST00000635828 SMC4Q9NTJ3 1288 aa10.96□□□□□ -0.65
CDKL5-209ENST00000635828 TEX13AQ9BXU3 409 aaPredicted RBP10.96□□□□□ -0.66
CDKL5-209ENST00000635828 NOB1Q9ULX3 412 aaKnown RBP10.96□□□□□ -0.66
CDKL5-209ENST00000635828 CLUAP1Q96AJ1 413 aa10.95□□□□□ -0.66
CDKL5-209ENST00000635828 ADCY9O60503 1353 aa10.95□□□□□ -0.66
CDKL5-209ENST00000635828 USP42Q9H9J4 1324 aaKnown RBP10.95□□□□□ -0.66
CDKL5-209ENST00000635828 PI4KAP2A4QPH2 592 aa10.95□□□□□ -0.66
CDKL5-209ENST00000635828 FLIIQ13045 1269 aa10.95□□□□□ -0.66
CDKL5-209ENST00000635828 PI4KAP1Q8N8J0 262 aa10.95□□□□□ -0.66
CDKL5-209ENST00000635828 WWC3Q9ULE0 1092 aa10.95□□□□□ -0.66
CDKL5-209ENST00000635828 ARFGEF2Q9Y6D5 1785 aa10.95□□□□□ -0.66
CDKL5-209ENST00000635828 C20orf194Q5TEA3 1177 aa10.95□□□□□ -0.66
CDKL5-209ENST00000635828 SSFA2P28290 1259 aa10.94□□□□□ -0.66
CDKL5-209ENST00000635828 UBN2Q6ZU65 1347 aa10.94□□□□□ -0.66
CDKL5-209ENST00000635828 HOXB7P09629 217 aa10.94□□□□□ -0.66
CDKL5-209ENST00000635828 CWF19L2Q2TBE0 894 aaKnown RBP10.94□□□□□ -0.66
CDKL5-209ENST00000635828 BCORQ6W2J9 1755 aa10.94□□□□□ -0.66
CDKL5-209ENST00000635828 FKBP5Q13451 457 aaPredicted RBP10.94□□□□□ -0.66
CDKL5-209ENST00000635828 MAP3K2Q9Y2U5 619 aa10.94□□□□□ -0.66
CDKL5-209ENST00000635828 DDR1Q08345 913 aa10.93□□□□□ -0.66
CDKL5-209ENST00000635828 SLC51AQ86UW1 340 aa10.93□□□□□ -0.66
CDKL5-209ENST00000635828 RLBP1P12271 317 aa10.93□□□□□ -0.66
CDKL5-209ENST00000635828 STK31Q9BXU1 1019 aa10.93□□□□□ -0.66
CDKL5-209ENST00000635828 ANKRD13DQ6ZTN6 518 aa10.93□□□□□ -0.66
CDKL5-209ENST00000635828 NARFQ9UHQ1 456 aa10.93□□□□□ -0.66
CDKL5-209ENST00000635828 SCN7AQ01118 1682 aa10.93□□□□□ -0.66
CDKL5-209ENST00000635828 NFIXQ14938 502 aa10.92□□□□□ -0.66
CDKL5-209ENST00000635828 SLC4A10Q6U841 1118 aa10.92□□□□□ -0.66
CDKL5-209ENST00000635828 RCAN3Q9UKA8 241 aa10.92□□□□□ -0.66
CDKL5-209ENST00000635828 QSER1Q2KHR3 1735 aa10.92□□□□□ -0.66
CDKL5-209ENST00000635828 ZPR1O75312 459 aa10.92□□□□□ -0.66
CDKL5-209ENST00000635828 NUTM1Q86Y26 1132 aa10.92□□□□□ -0.66
CDKL5-209ENST00000635828 MAP3K15Q6ZN16 1313 aa10.92□□□□□ -0.66
CDKL5-209ENST00000635828 IGKV5-2P06315 115 aa10.92□□□□□ -0.66
CDKL5-209ENST00000635828 IRX6P78412 446 aaPredicted RBP10.92□□□□□ -0.66
CDKL5-209ENST00000635828 HYPKQ9NX55 129 aa10.92□□□□□ -0.66
CDKL5-209ENST00000635828 CARMIL3Q8ND23 1372 aa10.91□□□□□ -0.66
CDKL5-209ENST00000635828 MMP10P09238 476 aa10.91□□□□□ -0.66
CDKL5-209ENST00000635828 PTGER2P43116 358 aa10.91□□□□□ -0.66
CDKL5-209ENST00000635828 MYD88Q99836 296 aa10.91□□□□□ -0.66
CDKL5-209ENST00000635828 RIC3Q7Z5B4 369 aa10.91□□□□□ -0.66
CDKL5-209ENST00000635828 AFDNP55196 1824 aaKnown RBP10.91□□□□□ -0.66
CDKL5-209ENST00000635828 TRIM27P14373 513 aa10.91□□□□□ -0.66
CDKL5-209ENST00000635828 SUSD4Q5VX71 490 aa10.9□□□□□ -0.66
CDKL5-209ENST00000635828 PANK1Q8TE04 598 aa10.9□□□□□ -0.66
CDKL5-209ENST00000635828 NIP7Q9Y221 180 aaKnown RBP eCLIP10.9□□□□□ -0.66
CDKL5-209ENST00000635828 SGIP1Q9BQI5 828 aa10.9□□□□□ -0.67
CDKL5-209ENST00000635828 SUPT16HQ9Y5B9 1047 aaKnown RBP10.9□□□□□ -0.67
CDKL5-209ENST00000635828 GIGYF2Q6Y7W6 1299 aaKnown RBP10.89□□□□□ -0.67
CDKL5-209ENST00000635828 KIF6Q6ZMV9 814 aa10.89□□□□□ -0.67
CDKL5-209ENST00000635828 CACNA1FO60840 1977 aa10.89□□□□□ -0.67
CDKL5-209ENST00000635828 C3orf67Q6ZVT6 689 aa10.89□□□□□ -0.67
CDKL5-209ENST00000635828 NPM2Q86SE8 214 aaKnown RBP10.89□□□□□ -0.67
CDKL5-209ENST00000635828 KLHL34Q8N239 644 aa10.89□□□□□ -0.67
CDKL5-209ENST00000635828 PLBD2Q8NHP8 589 aa10.89□□□□□ -0.67
CDKL5-209ENST00000635828 PPP1R1BQ9UD71 204 aaPredicted RBP10.89□□□□□ -0.67
CDKL5-209ENST00000635828 TAF1P21675 1872 aa10.89□□□□□ -0.67
CDKL5-209ENST00000635828 COL4A1P02462 1669 aa10.89□□□□□ -0.67
CDKL5-209ENST00000635828 POLRMTO00411 1230 aaKnown RBP10.89□□□□□ -0.67
CDKL5-209ENST00000635828 TM4SF1P30408 202 aa10.89□□□□□ -0.67
CDKL5-209ENST00000635828 FAM89AQ96GI7 184 aa10.89□□□□□ -0.67
CDKL5-209ENST00000635828 ALDH1L2Q3SY69 923 aa10.88□□□□□ -0.67
CDKL5-209ENST00000635828 KSR2Q6VAB6 950 aa10.88□□□□□ -0.67
CDKL5-209ENST00000635828 ERBB4Q15303 1308 aa10.88□□□□□ -0.67
CDKL5-209ENST00000635828 ADRA2BP18089 450 aa10.88□□□□□ -0.67
CDKL5-209ENST00000635828 ANKRD36CQ5JPF3 1778 aa10.88□□□□□ -0.67
CDKL5-209ENST00000635828 TCIRG1Q13488 830 aa10.87□□□□□ -0.67
CDKL5-209ENST00000635828 BEND3Q5T5X7 828 aa10.87□□□□□ -0.67
CDKL5-209ENST00000635828 ZNF34Q8IZ26 560 aa10.87□□□□□ -0.67
CDKL5-209ENST00000635828 DNAAF4Q8WXU2 420 aa10.87□□□□□ -0.67
CDKL5-209ENST00000635828 CCDC85AQ96PX6 553 aaPredicted RBP10.87□□□□□ -0.67
CDKL5-209ENST00000635828 MTFR1LQ9H019 292 aa10.87□□□□□ -0.67
CDKL5-209ENST00000635828 ABCC12Q96J65 1359 aa10.87□□□□□ -0.67
CDKL5-209ENST00000635828 NLRP10Q86W26 655 aa10.87□□□□□ -0.67
CDKL5-209ENST00000635828 METTL22Q9BUU2 404 aaPredicted RBP10.87□□□□□ -0.67
CDKL5-209ENST00000635828 TNRC6CQ9HCJ0 1690 aaKnown RBP10.86□□□□□ -0.67
CDKL5-209ENST00000635828 ERFEQ4G0M1 354 aa10.86□□□□□ -0.67
CDKL5-209ENST00000635828 TMEM57Q8N5G2 664 aa10.86□□□□□ -0.67
CDKL5-209ENST00000635828 SERPINB2P05120 415 aa10.86□□□□□ -0.67
CDKL5-209ENST00000635828 NBPF7P0C2Y1 421 aaPredicted RBP10.86□□□□□ -0.67
CDKL5-209ENST00000635828 HCLS1P14317 486 aaPredicted RBP10.86□□□□□ -0.67
CDKL5-209ENST00000635828 NEURL1BA8MQ27 555 aa10.86□□□□□ -0.67
CDKL5-209ENST00000635828 NLGN2Q8NFZ4 835 aa10.86□□□□□ -0.67
CDKL5-209ENST00000635828 SETDB2Q96T68 719 aa10.86□□□□□ -0.67
CDKL5-209ENST00000635828 ANKRD31Q8N7Z5 1873 aa10.86□□□□□ -0.67
CDKL5-209ENST00000635828 ERVV-1B6SEH8 477 aa10.85□□□□□ -0.67
CDKL5-209ENST00000635828 ATF7IPQ6VMQ6 1270 aa10.85□□□□□ -0.67
CDKL5-209ENST00000635828 ISCA1Q9BUE6 129 aa10.85□□□□□ -0.67
CDKL5-209ENST00000635828 N4BP2Q86UW6 1770 aaPredicted RBP10.85□□□□□ -0.67
CDKL5-209ENST00000635828 PRR5LQ6MZQ0 368 aa10.85□□□□□ -0.67
CDKL5-209ENST00000635828 FLAD1Q8NFF5 587 aa10.85□□□□□ -0.67
CDKL5-209ENST00000635828 A0A087WZG4 1122 aa10.85□□□□□ -0.67
CDKL5-209ENST00000635828 NTSR2O95665 410 aa10.85□□□□□ -0.67
CDKL5-209ENST00000635828 CT47B1P0C2W7 299 aaPredicted RBP10.85□□□□□ -0.67
CDKL5-209ENST00000635828 COG6Q9Y2V7 657 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms