RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 CCDC30Q5VVM6 783 aa19.96■□□□□ 0.79
CLN6-211ENST00000635754 NUP98P52948 1817 aa19.95■□□□□ 0.78
CLN6-211ENST00000635754 RGL2O15211 777 aa19.95■□□□□ 0.78
CLN6-211ENST00000635754 LRP10Q7Z4F1 713 aa19.95■□□□□ 0.78
CLN6-211ENST00000635754 HYPKQ9NX55 129 aa19.95■□□□□ 0.78
CLN6-211ENST00000635754 SLFN5Q08AF3 891 aa19.94■□□□□ 0.78
CLN6-211ENST00000635754 CLEC4GQ6UXB4 293 aa19.94■□□□□ 0.78
CLN6-211ENST00000635754 TTLL7Q6ZT98 887 aa19.94■□□□□ 0.78
CLN6-211ENST00000635754 KLHL34Q8N239 644 aa19.94■□□□□ 0.78
CLN6-211ENST00000635754 MAP3K15Q6ZN16 1313 aa19.94■□□□□ 0.78
CLN6-211ENST00000635754 TM4SF1P30408 202 aa19.93■□□□□ 0.78
CLN6-211ENST00000635754 NFIXQ14938 502 aa19.93■□□□□ 0.78
CLN6-211ENST00000635754 BICDL1Q6ZP65 573 aa19.93■□□□□ 0.78
CLN6-211ENST00000635754 STK31Q9BXU1 1019 aa19.93■□□□□ 0.78
CLN6-211ENST00000635754 FHDC1Q9C0D6 1143 aaPredicted RBP19.93■□□□□ 0.78
CLN6-211ENST00000635754 AFDNP55196 1824 aaKnown RBP19.93■□□□□ 0.78
CLN6-211ENST00000635754 ERVV-1B6SEH8 477 aa19.93■□□□□ 0.78
CLN6-211ENST00000635754 DDR1Q08345 913 aa19.93■□□□□ 0.78
CLN6-211ENST00000635754 AIMP1Q12904 312 aaKnown RBP19.93■□□□□ 0.78
CLN6-211ENST00000635754 TBC1D9BQ66K14 1250 aa19.93■□□□□ 0.78
CLN6-211ENST00000635754 COPS6Q7L5N1 327 aa19.93■□□□□ 0.78
CLN6-211ENST00000635754 XAGE3Q8WTP9 111 aa19.93■□□□□ 0.78
CLN6-211ENST00000635754 CDCA7LQ96GN5 454 aa19.93■□□□□ 0.78
CLN6-211ENST00000635754 ZBTB3Q9H5J0 574 aa19.93■□□□□ 0.78
CLN6-211ENST00000635754 CACNA1FO60840 1977 aa19.92■□□□□ 0.78
CLN6-211ENST00000635754 POLRMTO00411 1230 aaKnown RBP19.92■□□□□ 0.78
CLN6-211ENST00000635754 NRXN2Q9P2S2 1712 aa19.91■□□□□ 0.78
CLN6-211ENST00000635754 CARMIL3Q8ND23 1372 aa19.91■□□□□ 0.78
CLN6-211ENST00000635754 KIF13BQ9NQT8 1826 aa19.91■□□□□ 0.78
CLN6-211ENST00000635754 VAMP4O75379 141 aa19.91■□□□□ 0.78
CLN6-211ENST00000635754 SETDB2Q96T68 719 aa19.91■□□□□ 0.78
CLN6-211ENST00000635754 ANKRD36CQ5JPF3 1778 aa19.9■□□□□ 0.78
CLN6-211ENST00000635754 HLFQ16534 295 aa19.9■□□□□ 0.78
CLN6-211ENST00000635754 SYT17Q9BSW7 474 aa19.9■□□□□ 0.78
CLN6-211ENST00000635754 C10orf71Q711Q0 1435 aa19.89■□□□□ 0.78
CLN6-211ENST00000635754 ATP10DQ9P241 1426 aa19.89■□□□□ 0.78
CLN6-211ENST00000635754 CD2APQ9Y5K6 639 aa19.89■□□□□ 0.77
CLN6-211ENST00000635754 ARFGEF2Q9Y6D5 1785 aa19.89■□□□□ 0.77
CLN6-211ENST00000635754 TCERG1O14776 1098 aaKnown RBP19.88■□□□□ 0.77
CLN6-211ENST00000635754 SERPINB2P05120 415 aa19.88■□□□□ 0.77
CLN6-211ENST00000635754 GIGYF2Q6Y7W6 1299 aaKnown RBP19.88■□□□□ 0.77
CLN6-211ENST00000635754 TRMT2AQ8IZ69 625 aaKnown RBP19.88■□□□□ 0.77
CLN6-211ENST00000635754 NIP7Q9Y221 180 aaKnown RBP eCLIP19.88■□□□□ 0.77
CLN6-211ENST00000635754 ZBED9Q6R2W3 1325 aa19.88■□□□□ 0.77
CLN6-211ENST00000635754 ANKRD13DQ6ZTN6 518 aa19.87■□□□□ 0.77
CLN6-211ENST00000635754 PLBD2Q8NHP8 589 aa19.87■□□□□ 0.77
CLN6-211ENST00000635754 PHAXQ9H814 394 aaKnown RBP19.87■□□□□ 0.77
CLN6-211ENST00000635754 SLC4A2P04920 1241 aa19.86■□□□□ 0.77
CLN6-211ENST00000635754 NPHP1O15259 732 aa19.85■□□□□ 0.77
CLN6-211ENST00000635754 DDX58O95786 925 aaKnown RBP19.85■□□□□ 0.77
CLN6-211ENST00000635754 HSP90AB3PQ58FF7 597 aa19.85■□□□□ 0.77
CLN6-211ENST00000635754 NBPF5PQ86XG9 351 aaPredicted RBP19.85■□□□□ 0.77
CLN6-211ENST00000635754 GPTP24298 496 aa19.84■□□□□ 0.77
CLN6-211ENST00000635754 CNBD1Q8NA66 436 aa19.84■□□□□ 0.77
CLN6-211ENST00000635754 NLGN2Q8NFZ4 835 aa19.84■□□□□ 0.77
CLN6-211ENST00000635754 KIAA1551Q9HCM1 1747 aa19.83■□□□□ 0.77
CLN6-211ENST00000635754 RIC3Q7Z5B4 369 aa19.83■□□□□ 0.76
CLN6-211ENST00000635754 ZNF34Q8IZ26 560 aa19.83■□□□□ 0.76
CLN6-211ENST00000635754 N4BP2Q86UW6 1770 aaPredicted RBP19.83■□□□□ 0.76
CLN6-211ENST00000635754 CT47B1P0C2W7 299 aaPredicted RBP19.82■□□□□ 0.76
CLN6-211ENST00000635754 ST5P78524 1137 aa19.82■□□□□ 0.76
CLN6-211ENST00000635754 TCIRG1Q13488 830 aa19.82■□□□□ 0.76
CLN6-211ENST00000635754 PRR5LQ6MZQ0 368 aa19.82■□□□□ 0.76
CLN6-211ENST00000635754 ZNF428Q96B54 188 aa19.82■□□□□ 0.76
CLN6-211ENST00000635754 PXDNLA1KZ92 1463 aa19.81■□□□□ 0.76
CLN6-211ENST00000635754 IBTKQ9P2D0 1353 aaPredicted RBP19.81■□□□□ 0.76
CLN6-211ENST00000635754 UBN2Q6ZU65 1347 aa19.81■□□□□ 0.76
CLN6-211ENST00000635754 ANKRD31Q8N7Z5 1873 aa19.81■□□□□ 0.76
CLN6-211ENST00000635754 FAM177BA6PVY3 158 aa19.81■□□□□ 0.76
CLN6-211ENST00000635754 TGFB2P61812 414 aa19.81■□□□□ 0.76
CLN6-211ENST00000635754 FLIIQ13045 1269 aa19.81■□□□□ 0.76
CLN6-211ENST00000635754 PARP10Q53GL7 1025 aa19.81■□□□□ 0.76
CLN6-211ENST00000635754 TPTE2Q6XPS3 522 aa19.81■□□□□ 0.76
CLN6-211ENST00000635754 G2E3Q7L622 706 aa19.81■□□□□ 0.76
CLN6-211ENST00000635754 NYXQ9GZU5 481 aa19.81■□□□□ 0.76
CLN6-211ENST00000635754 GTF2E1P29083 439 aaPredicted RBP19.79■□□□□ 0.76
CLN6-211ENST00000635754 FKBP5Q13451 457 aaPredicted RBP19.79■□□□□ 0.76
CLN6-211ENST00000635754 PPP1R42Q7Z4L9 355 aa19.79■□□□□ 0.76
CLN6-211ENST00000635754 HOXD11P31277 338 aaPredicted RBP19.78■□□□□ 0.76
CLN6-211ENST00000635754 KSR2Q6VAB6 950 aa19.78■□□□□ 0.76
CLN6-211ENST00000635754 BRIP1Q9BX63 1249 aa19.78■□□□□ 0.76
CLN6-211ENST00000635754 MAP3K2Q9Y2U5 619 aa19.78■□□□□ 0.76
CLN6-211ENST00000635754 ADCY9O60503 1353 aa19.78■□□□□ 0.76
CLN6-211ENST00000635754 DLEC1Q9Y238 1755 aa19.78■□□□□ 0.76
CLN6-211ENST00000635754 PI4KAP2A4QPH2 592 aa19.77■□□□□ 0.76
CLN6-211ENST00000635754 SUSD4Q5VX71 490 aa19.77■□□□□ 0.76
CLN6-211ENST00000635754 CCDC24Q8N4L8 307 aa19.77■□□□□ 0.76
CLN6-211ENST00000635754 PI4KAP1Q8N8J0 262 aa19.77■□□□□ 0.76
CLN6-211ENST00000635754 BRCA1P38398 1863 aaKnown RBP19.77■□□□□ 0.76
CLN6-211ENST00000635754 DCAF8L1A6NGE4 600 aa19.76■□□□□ 0.75
CLN6-211ENST00000635754 NTSR2O95665 410 aa19.76■□□□□ 0.75
CLN6-211ENST00000635754 PDE6BP35913 854 aa19.76■□□□□ 0.75
CLN6-211ENST00000635754 ALDH1L2Q3SY69 923 aa19.76■□□□□ 0.75
CLN6-211ENST00000635754 NLRP10Q86W26 655 aa19.76■□□□□ 0.75
CLN6-211ENST00000635754 MYD88Q99836 296 aa19.76■□□□□ 0.75
CLN6-211ENST00000635754 ISCA1Q9BUE6 129 aa19.76■□□□□ 0.75
CLN6-211ENST00000635754 UTP14AQ9BVJ6 771 aaKnown RBP19.76■□□□□ 0.75
CLN6-211ENST00000635754 RNF216Q9NWF9 866 aaPredicted RBP19.76■□□□□ 0.75
CLN6-211ENST00000635754 RNF123Q5XPI4 1314 aa19.76■□□□□ 0.75
CLN6-211ENST00000635754 A0A0G2JLW4 131 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms