RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 NFE2L2Q16236 605 aa16.68■□□□□ 0.26
PTPN11-206ENST00000635652 RBM46Q8TBY0 533 aaKnown RBP16.68■□□□□ 0.26
PTPN11-206ENST00000635652 PNISRQ8TF01 805 aaKnown RBP16.68■□□□□ 0.26
PTPN11-206ENST00000635652 ZC3H4Q9UPT8 1303 aaKnown RBP16.68■□□□□ 0.26
PTPN11-206ENST00000635652 NFKBIEO00221 500 aa16.67■□□□□ 0.26
PTPN11-206ENST00000635652 PRELPP51888 382 aa16.67■□□□□ 0.26
PTPN11-206ENST00000635652 NGEFQ8N5V2 710 aa16.67■□□□□ 0.26
PTPN11-206ENST00000635652 CNKSR1Q969H4 720 aa16.67■□□□□ 0.26
PTPN11-206ENST00000635652 NIP7Q9Y221 180 aaKnown RBP eCLIP16.67■□□□□ 0.26
PTPN11-206ENST00000635652 COL11A2P13942 1736 aaPredicted RBP16.67■□□□□ 0.26
PTPN11-206ENST00000635652 CACNA1SQ13698 1873 aa16.67■□□□□ 0.26
PTPN11-206ENST00000635652 PCNTO95613 3336 aa16.66■□□□□ 0.26
PTPN11-206ENST00000635652 FAM177BA6PVY3 158 aa16.66■□□□□ 0.26
PTPN11-206ENST00000635652 TPTE2Q6XPS3 522 aa16.66■□□□□ 0.26
PTPN11-206ENST00000635652 THUMPD2Q9BTF0 503 aaKnown RBP16.66■□□□□ 0.26
PTPN11-206ENST00000635652 GLTPD2A6NH11 291 aa16.65■□□□□ 0.26
PTPN11-206ENST00000635652 SRGNP10124 158 aa16.65■□□□□ 0.26
PTPN11-206ENST00000635652 STYK1Q6J9G0 422 aa16.65■□□□□ 0.26
PTPN11-206ENST00000635652 MASTLQ96GX5 879 aa16.65■□□□□ 0.26
PTPN11-206ENST00000635652 RRP7AQ9Y3A4 280 aaKnown RBP16.65■□□□□ 0.26
PTPN11-206ENST00000635652 TNRC6CQ9HCJ0 1690 aaKnown RBP16.65■□□□□ 0.26
PTPN11-206ENST00000635652 SLX4Q8IY92 1834 aa16.64■□□□□ 0.25
PTPN11-206ENST00000635652 EIF4A1P60842 406 aaKnown RBP16.64■□□□□ 0.25
PTPN11-206ENST00000635652 FSTL1Q12841 308 aa16.64■□□□□ 0.25
PTPN11-206ENST00000635652 DDX10Q13206 875 aaKnown RBP16.64■□□□□ 0.25
PTPN11-206ENST00000635652 RALBP1Q15311 655 aa16.64■□□□□ 0.25
PTPN11-206ENST00000635652 PRPF40BQ6NWY9 871 aaKnown RBP16.64■□□□□ 0.25
PTPN11-206ENST00000635652 KDM3BQ7LBC6 1761 aa16.64■□□□□ 0.25
PTPN11-206ENST00000635652 FER1L6Q2WGJ9 1857 aa16.63■□□□□ 0.25
PTPN11-206ENST00000635652 RGL2O15211 777 aa16.63■□□□□ 0.25
PTPN11-206ENST00000635652 VEGFAP15692 232 aaPredicted RBP16.63■□□□□ 0.25
PTPN11-206ENST00000635652 GTF2E1P29083 439 aaPredicted RBP16.63■□□□□ 0.25
PTPN11-206ENST00000635652 HLFQ16534 295 aa16.63■□□□□ 0.25
PTPN11-206ENST00000635652 ERFEQ4G0M1 354 aa16.63■□□□□ 0.25
PTPN11-206ENST00000635652 LAMB4A4D0S4 1761 aa16.63■□□□□ 0.25
PTPN11-206ENST00000635652 TIAM2Q8IVF5 1701 aa16.62■□□□□ 0.25
PTPN11-206ENST00000635652 MYL6BP14649 208 aa16.62■□□□□ 0.25
PTPN11-206ENST00000635652 RIPK4P57078 832 aa16.62■□□□□ 0.25
PTPN11-206ENST00000635652 SOGA3Q5TF21 947 aa16.62■□□□□ 0.25
PTPN11-206ENST00000635652 DPY19L2Q6NUT2 758 aa16.62■□□□□ 0.25
PTPN11-206ENST00000635652 TAOK3Q9H2K8 898 aa16.62■□□□□ 0.25
PTPN11-206ENST00000635652 DICER1Q9UPY3 1922 aaKnown RBP16.61■□□□□ 0.25
PTPN11-206ENST00000635652 NPR1P16066 1061 aa16.61■□□□□ 0.25
PTPN11-206ENST00000635652 KIF6Q6ZMV9 814 aa16.61■□□□□ 0.25
PTPN11-206ENST00000635652 TSPYL4Q9UJ04 414 aa16.61■□□□□ 0.25
PTPN11-206ENST00000635652 SMC1BQ8NDV3 1235 aa16.6■□□□□ 0.25
PTPN11-206ENST00000635652 NUP98P52948 1817 aa16.59■□□□□ 0.25
PTPN11-206ENST00000635652 ERVV-1B6SEH8 477 aa16.59■□□□□ 0.25
PTPN11-206ENST00000635652 TTLL7Q6ZT98 887 aa16.59■□□□□ 0.25
PTPN11-206ENST00000635652 DNAJC5GQ8N7S2 189 aa16.59■□□□□ 0.25
PTPN11-206ENST00000635652 MAP3K15Q6ZN16 1313 aa16.59■□□□□ 0.25
PTPN11-206ENST00000635652 ARFGEF2Q9Y6D5 1785 aa16.59■□□□□ 0.25
PTPN11-206ENST00000635652 KLRG2A4D1S0 409 aaPredicted RBP16.58■□□□□ 0.24
PTPN11-206ENST00000635652 HTRA3P83110 453 aa16.58■□□□□ 0.24
PTPN11-206ENST00000635652 NYXQ9GZU5 481 aa16.58■□□□□ 0.24
PTPN11-206ENST00000635652 ZBTB3Q9H5J0 574 aa16.58■□□□□ 0.24
PTPN11-206ENST00000635652 LTBP3Q9NS15 1303 aa16.58■□□□□ 0.24
PTPN11-206ENST00000635652 WDR90Q96KV7 1748 aa16.58■□□□□ 0.24
PTPN11-206ENST00000635652 MYBBP1AQ9BQG0 1328 aaKnown RBP16.57■□□□□ 0.24
PTPN11-206ENST00000635652 EIF2S2P20042 333 aaKnown RBP16.57■□□□□ 0.24
PTPN11-206ENST00000635652 GPTP24298 496 aa16.57■□□□□ 0.24
PTPN11-206ENST00000635652 TMPOP42166 694 aaKnown RBP16.57■□□□□ 0.24
PTPN11-206ENST00000635652 LMOD3Q0VAK6 560 aa16.57■□□□□ 0.24
PTPN11-206ENST00000635652 NEUROD2Q15784 382 aa16.57■□□□□ 0.24
PTPN11-206ENST00000635652 CCDC93Q567U6 631 aa16.57■□□□□ 0.24
PTPN11-206ENST00000635652 NUTM1Q86Y26 1132 aa16.57■□□□□ 0.24
PTPN11-206ENST00000635652 ALDH1B1P30837 517 aa16.56■□□□□ 0.24
PTPN11-206ENST00000635652 CCDC146Q8IYE0 955 aa16.56■□□□□ 0.24
PTPN11-206ENST00000635652 C7orf43Q8WVR3 580 aa16.56■□□□□ 0.24
PTPN11-206ENST00000635652 POTECB2RU33 542 aa16.55■□□□□ 0.24
PTPN11-206ENST00000635652 ERBB4Q15303 1308 aa16.54■□□□□ 0.24
PTPN11-206ENST00000635652 DDNO94850 711 aaPredicted RBP16.54■□□□□ 0.24
PTPN11-206ENST00000635652 WDR43Q15061 677 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTPN11-206ENST00000635652 OLFM4Q6UX06 510 aa16.54■□□□□ 0.24
PTPN11-206ENST00000635652 RTKN2Q8IZC4 609 aa16.54■□□□□ 0.24
PTPN11-206ENST00000635652 BABAM1Q9NWV8 329 aa16.54■□□□□ 0.24
PTPN11-206ENST00000635652 FKBP4Q02790 459 aaKnown RBP eCLIP16.53■□□□□ 0.24
PTPN11-206ENST00000635652 SUSD4Q5VX71 490 aa16.53■□□□□ 0.24
PTPN11-206ENST00000635652 RPGRQ92834 1020 aaKnown RBP16.53■□□□□ 0.24
PTPN11-206ENST00000635652 KLRG1Q96E93 195 aa16.53■□□□□ 0.24
PTPN11-206ENST00000635652 ZNF277Q9NRM2 450 aaPredicted RBP16.53■□□□□ 0.24
PTPN11-206ENST00000635652 LAS1LQ9Y4W2 734 aaKnown RBP16.53■□□□□ 0.24
PTPN11-206ENST00000635652 ABCC12Q96J65 1359 aa16.52■□□□□ 0.24
PTPN11-206ENST00000635652 UBN2Q6ZU65 1347 aa16.52■□□□□ 0.24
PTPN11-206ENST00000635652 ANXA1P04083 346 aa16.52■□□□□ 0.24
PTPN11-206ENST00000635652 GIGYF2Q6Y7W6 1299 aaKnown RBP16.52■□□□□ 0.24
PTPN11-206ENST00000635652 ZNF34Q8IZ26 560 aa16.52■□□□□ 0.24
PTPN11-206ENST00000635652 NECTIN2Q92692 538 aa16.52■□□□□ 0.24
PTPN11-206ENST00000635652 CRY2Q49AN0 593 aa16.51■□□□□ 0.23
PTPN11-206ENST00000635652 PPP1R42Q7Z4L9 355 aa16.51■□□□□ 0.23
PTPN11-206ENST00000635652 RUNDC1Q96C34 613 aa16.51■□□□□ 0.23
PTPN11-206ENST00000635652 PDIA6Q15084 440 aa16.5■□□□□ 0.23
PTPN11-206ENST00000635652 PROSER3Q2NL68 480 aa16.5■□□□□ 0.23
PTPN11-206ENST00000635652 IFFO2Q5TF58 517 aa16.5■□□□□ 0.23
PTPN11-206ENST00000635652 SYNE4Q8N205 404 aa16.5■□□□□ 0.23
PTPN11-206ENST00000635652 IARSP41252 1262 aaKnown RBP16.49■□□□□ 0.23
PTPN11-206ENST00000635652 AIMP1Q12904 312 aaKnown RBP16.49■□□□□ 0.23
PTPN11-206ENST00000635652 PARP10Q53GL7 1025 aa16.49■□□□□ 0.23
PTPN11-206ENST00000635652 RBM17Q96I25 401 aaKnown RBP16.49■□□□□ 0.23
PTPN11-206ENST00000635652 ADAMTS8Q9UP79 889 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 296.8 ms