RNA–Protein interactions for RNA: ENST00000630813.1

CHD2-220, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2

Gene CHD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-220ENST00000630813 CANXP27824 592 aaKnown RBP5.63□□□□□ -1.51
CHD2-220ENST00000630813 HOXC9P31274 260 aa5.63□□□□□ -1.51
CHD2-220ENST00000630813 PRSS12P56730 875 aa5.63□□□□□ -1.51
CHD2-220ENST00000630813 GNAI1P63096 354 aa5.63□□□□□ -1.51
CHD2-220ENST00000630813 HDAC1Q13547 482 aaPredicted RBP5.63□□□□□ -1.51
CHD2-220ENST00000630813 FAM161AQ3B820 660 aa5.63□□□□□ -1.51
CHD2-220ENST00000630813 ZNF697Q5TEC3 545 aa5.63□□□□□ -1.51
CHD2-220ENST00000630813 SMC5Q8IY18 1101 aa5.63□□□□□ -1.51
CHD2-220ENST00000630813 NECTIN2Q92692 538 aa5.63□□□□□ -1.51
CHD2-220ENST00000630813 ORAI2Q96SN7 254 aa5.63□□□□□ -1.51
CHD2-220ENST00000630813 FAM198AQ9UFP1 575 aa5.63□□□□□ -1.51
CHD2-220ENST00000630813 PNMA3Q9UL41 463 aa5.63□□□□□ -1.51
CHD2-220ENST00000630813 NOP58Q9Y2X3 529 aaKnown RBP5.63□□□□□ -1.51
CHD2-220ENST00000630813 ABCC4O15439 1325 aa5.63□□□□□ -1.51
CHD2-220ENST00000630813 FLT4P35916 1363 aa5.63□□□□□ -1.51
CHD2-220ENST00000630813 MSH6P52701 1360 aa5.63□□□□□ -1.51
CHD2-220ENST00000630813 STRCP1A6NGW2 1772 aa5.62□□□□□ -1.51
CHD2-220ENST00000630813 WIPF1O43516 503 aa5.62□□□□□ -1.51
CHD2-220ENST00000630813 AAMPQ13685 434 aa5.62□□□□□ -1.51
CHD2-220ENST00000630813 TWISTNBQ3B726 338 aaPredicted RBP5.62□□□□□ -1.51
CHD2-220ENST00000630813 NPM2Q86SE8 214 aaKnown RBP5.62□□□□□ -1.51
CHD2-220ENST00000630813 IL17REQ8NFR9 667 aa5.62□□□□□ -1.51
CHD2-220ENST00000630813 ARHGAP45Q92619 1136 aa5.62□□□□□ -1.51
CHD2-220ENST00000630813 LRRC37A3O60309 1634 aa5.62□□□□□ -1.51
CHD2-220ENST00000630813 GDF9O60383 454 aa5.61□□□□□ -1.51
CHD2-220ENST00000630813 RGPD2P0DJD1 1756 aa5.61□□□□□ -1.51
CHD2-220ENST00000630813 NBPF6Q5VWK0 638 aa5.61□□□□□ -1.51
CHD2-220ENST00000630813 VIRMAQ69YN4 1812 aaKnown RBP5.61□□□□□ -1.51
CHD2-220ENST00000630813 G2E3Q7L622 706 aa5.61□□□□□ -1.51
CHD2-220ENST00000630813 ITPRIPQ8IWB1 547 aa5.61□□□□□ -1.51
CHD2-220ENST00000630813 ABTB2Q8N961 1025 aa5.61□□□□□ -1.51
CHD2-220ENST00000630813 KIAA0232Q92628 1395 aa5.61□□□□□ -1.51
CHD2-220ENST00000630813 ZNF428Q96B54 188 aa5.61□□□□□ -1.51
CHD2-220ENST00000630813 KIF16BQ96L93 1317 aa5.61□□□□□ -1.51
CHD2-220ENST00000630813 NBPF4Q96M43 638 aa5.61□□□□□ -1.51
CHD2-220ENST00000630813 C1orf115Q9H7X2 142 aa5.61□□□□□ -1.51
CHD2-220ENST00000630813 TRPM3Q9HCF6 1732 aaPredicted RBP5.61□□□□□ -1.51
CHD2-220ENST00000630813 SLIT3O75094 1523 aa5.6□□□□□ -1.51
CHD2-220ENST00000630813 KIF24Q5T7B8 1368 aa5.6□□□□□ -1.51
CHD2-220ENST00000630813 SLC4A3P48751 1232 aa5.6□□□□□ -1.51
CHD2-220ENST00000630813 AMPHP49418 695 aa5.6□□□□□ -1.51
CHD2-220ENST00000630813 XPCQ01831 940 aaPredicted RBP5.6□□□□□ -1.51
CHD2-220ENST00000630813 CALD1Q05682 793 aaKnown RBP5.6□□□□□ -1.51
CHD2-220ENST00000630813 LMOD3Q0VAK6 560 aa5.6□□□□□ -1.51
CHD2-220ENST00000630813 NFX1Q12986 1120 aaKnown RBP5.6□□□□□ -1.51
CHD2-220ENST00000630813 LIAT1Q6ZQX7 453 aa5.6□□□□□ -1.51
CHD2-220ENST00000630813 FTSJ3Q8IY81 847 aaKnown RBP5.6□□□□□ -1.51
CHD2-220ENST00000630813 USHBP1Q8N6Y0 703 aa5.6□□□□□ -1.51
CHD2-220ENST00000630813 IP6K1Q92551 441 aa5.6□□□□□ -1.51
CHD2-220ENST00000630813 RWDD1Q9H446 243 aaPredicted RBP5.6□□□□□ -1.51
CHD2-220ENST00000630813 DDX19BQ9UMR2 479 aa5.6□□□□□ -1.51
CHD2-220ENST00000630813 LTN1O94822 1766 aa5.6□□□□□ -1.51
CHD2-220ENST00000630813 PHRF1Q9P1Y6 1649 aaKnown RBP5.59□□□□□ -1.51
CHD2-220ENST00000630813 C1orf167Q5SNV9 1468 aa5.59□□□□□ -1.51
CHD2-220ENST00000630813 NCAPD2Q15021 1401 aa5.59□□□□□ -1.51
CHD2-220ENST00000630813 ATP10DQ9P241 1426 aa5.59□□□□□ -1.51
CHD2-220ENST00000630813 IPO8O15397 1037 aaKnown RBP5.59□□□□□ -1.51
CHD2-220ENST00000630813 ANP32AP39687 249 aaKnown RBP5.59□□□□□ -1.51
CHD2-220ENST00000630813 NUCB1Q02818 461 aa5.59□□□□□ -1.51
CHD2-220ENST00000630813 ESCO1Q5FWF5 840 aa5.59□□□□□ -1.51
CHD2-220ENST00000630813 INTS3Q68E01 1043 aaKnown RBP5.59□□□□□ -1.51
CHD2-220ENST00000630813 NUDT18Q6ZVK8 323 aa5.59□□□□□ -1.51
CHD2-220ENST00000630813 ARHGEF25Q86VW2 580 aa5.59□□□□□ -1.51
CHD2-220ENST00000630813 ANKLE1Q8NAG6 615 aa5.59□□□□□ -1.51
CHD2-220ENST00000630813 CERKQ8TCT0 537 aa5.59□□□□□ -1.51
CHD2-220ENST00000630813 DDX17Q92841 729 aaKnown RBP5.59□□□□□ -1.51
CHD2-220ENST00000630813 LRRC59Q96AG4 307 aaKnown RBP5.59□□□□□ -1.51
CHD2-220ENST00000630813 LTV1Q96GA3 475 aaPredicted RBP5.59□□□□□ -1.51
CHD2-220ENST00000630813 LGR6Q9HBX8 967 aa5.59□□□□□ -1.51
CHD2-220ENST00000630813 MED1Q15648 1581 aaPredicted RBP5.59□□□□□ -1.52
CHD2-220ENST00000630813 MST1RQ04912 1400 aa5.58□□□□□ -1.52
CHD2-220ENST00000630813 RTL1A6NKG5 1358 aa5.58□□□□□ -1.52
CHD2-220ENST00000630813 PPEF1O14829 653 aaPredicted RBP5.58□□□□□ -1.52
CHD2-220ENST00000630813 KCNQ3O43525 872 aa5.58□□□□□ -1.52
CHD2-220ENST00000630813 GTPBP6O43824 516 aaPredicted RBP5.58□□□□□ -1.52
CHD2-220ENST00000630813 NEFMP07197 916 aa5.58□□□□□ -1.52
CHD2-220ENST00000630813 CAMK2BQ13554 666 aa5.58□□□□□ -1.52
CHD2-220ENST00000630813 SLF2Q8IX21 1173 aa5.58□□□□□ -1.52
CHD2-220ENST00000630813 GMPR2Q9P2T1 348 aaKnown RBP5.58□□□□□ -1.52
CHD2-220ENST00000630813 DACH1Q9UI36 760 aa5.58□□□□□ -1.52
CHD2-220ENST00000630813 PCDHB3Q9Y5E6 796 aa5.58□□□□□ -1.52
CHD2-220ENST00000630813 PXDNQ92626 1479 aa5.58□□□□□ -1.52
CHD2-220ENST00000630813 CEMIPQ8WUJ3 1361 aa5.57□□□□□ -1.52
CHD2-220ENST00000630813 ALS2Q96Q42 1657 aa5.57□□□□□ -1.52
CHD2-220ENST00000630813 F6X3S4 739 aa5.57□□□□□ -1.52
CHD2-220ENST00000630813 HTATSF1O43719 755 aaKnown RBP5.57□□□□□ -1.52
CHD2-220ENST00000630813 GCP02774 474 aa5.57□□□□□ -1.52
CHD2-220ENST00000630813 HSPA2P54652 639 aa5.57□□□□□ -1.52
CHD2-220ENST00000630813 PSME1Q06323 249 aa5.57□□□□□ -1.52
CHD2-220ENST00000630813 SWT1Q5T5J6 900 aaKnown RBP5.57□□□□□ -1.52
CHD2-220ENST00000630813 KRT28Q7Z3Y7 464 aa5.57□□□□□ -1.52
CHD2-220ENST00000630813 PROSER2Q86WR7 435 aaPredicted RBP5.57□□□□□ -1.52
CHD2-220ENST00000630813 GAS2L2Q8NHY3 880 aa5.57□□□□□ -1.52
CHD2-220ENST00000630813 MEIS3Q99687 375 aa5.57□□□□□ -1.52
CHD2-220ENST00000630813 API5Q9BZZ5 524 aaKnown RBP5.57□□□□□ -1.52
CHD2-220ENST00000630813 LNPKQ9C0E8 428 aa5.57□□□□□ -1.52
CHD2-220ENST00000630813 COL18A1P39060 1754 aa5.57□□□□□ -1.52
CHD2-220ENST00000630813 RGPD5Q99666 1765 aa5.57□□□□□ -1.52
CHD2-220ENST00000630813 LMO7Q8WWI1 1683 aa5.56□□□□□ -1.52
CHD2-220ENST00000630813 CAMTA1Q9Y6Y1 1673 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms