RNA–Protein interactions for RNA: ENST00000629009.2

CCDC163-206, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,694 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-206ENST00000629009 ZNF784Q8NCA9 323 aaPredicted RBP11.18□□□□□ -0.62
CCDC163-206ENST00000629009 RNF39Q9H2S5 420 aa11.18□□□□□ -0.62
CCDC163-206ENST00000629009 SPON1Q9HCB6 807 aa11.18□□□□□ -0.62
CCDC163-206ENST00000629009 SPG7Q9UQ90 795 aa11.18□□□□□ -0.62
CCDC163-206ENST00000629009 CLK2P49760 499 aaKnown RBP11.17□□□□□ -0.62
CCDC163-206ENST00000629009 IFFO2Q5TF58 517 aa11.17□□□□□ -0.62
CCDC163-206ENST00000629009 HDGFL1Q5TGJ6 251 aa11.17□□□□□ -0.62
CCDC163-206ENST00000629009 PCDH11XQ9BZA7 1347 aa11.17□□□□□ -0.62
CCDC163-206ENST00000629009 PCDH11YQ9BZA8 1340 aa11.17□□□□□ -0.62
CCDC163-206ENST00000629009 KCNQ2O43526 872 aa11.17□□□□□ -0.62
CCDC163-206ENST00000629009 AMOTQ4VCS5 1084 aa11.17□□□□□ -0.62
CCDC163-206ENST00000629009 MYSM1Q5VVJ2 828 aa11.17□□□□□ -0.62
CCDC163-206ENST00000629009 DDX54Q8TDD1 881 aaKnown RBP11.17□□□□□ -0.62
CCDC163-206ENST00000629009 PPP1R1BQ9UD71 204 aaPredicted RBP11.17□□□□□ -0.62
CCDC163-206ENST00000629009 PKD1L3Q7Z443 1732 aa11.16□□□□□ -0.62
CCDC163-206ENST00000629009 U2SURPO15042 1029 aaKnown RBP11.16□□□□□ -0.62
CCDC163-206ENST00000629009 ZNF16P17020 682 aaPredicted RBP11.16□□□□□ -0.62
CCDC163-206ENST00000629009 MDM2Q00987 491 aaPredicted RBP11.16□□□□□ -0.62
CCDC163-206ENST00000629009 PLEKHO1Q53GL0 409 aaPredicted RBP11.16□□□□□ -0.62
CCDC163-206ENST00000629009 GPHNQ9NQX3 736 aaPredicted RBP11.16□□□□□ -0.62
CCDC163-206ENST00000629009 CLEC11AQ9Y240 323 aa11.16□□□□□ -0.62
CCDC163-206ENST00000629009 SENP3-EIF4A1A0A087X0R7 540 aa11.15□□□□□ -0.62
CCDC163-206ENST00000629009 TMEM88BA6NKF7 163 aa11.15□□□□□ -0.62
CCDC163-206ENST00000629009 CENPBP07199 599 aaPredicted RBP11.15□□□□□ -0.62
CCDC163-206ENST00000629009 OSBPP22059 807 aa11.15□□□□□ -0.62
CCDC163-206ENST00000629009 HNRNPUQ00839 825 aaKnown RBP eCLIP11.15□□□□□ -0.62
CCDC163-206ENST00000629009 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.63
CCDC163-206ENST00000629009 NBPF14Q5TI25 921 aa11.14□□□□□ -0.63
CCDC163-206ENST00000629009 IFNL2Q8IZJ0 200 aa11.14□□□□□ -0.63
CCDC163-206ENST00000629009 UBXN4Q92575 508 aa11.14□□□□□ -0.63
CCDC163-206ENST00000629009 CYP27B1O15528 508 aa11.14□□□□□ -0.63
CCDC163-206ENST00000629009 HMOX1P09601 288 aa11.14□□□□□ -0.63
CCDC163-206ENST00000629009 B4GALNT3Q6L9W6 998 aa11.14□□□□□ -0.63
CCDC163-206ENST00000629009 TBC1D2BQ9UPU7 963 aa11.14□□□□□ -0.63
CCDC163-206ENST00000629009 ANKRD62A6NC57 917 aa11.13□□□□□ -0.63
CCDC163-206ENST00000629009 U2AF1L5P0DN76 240 aaPredicted RBP11.13□□□□□ -0.63
CCDC163-206ENST00000629009 U2AF1Q01081 240 aaKnown RBP eCLIP11.13□□□□□ -0.63
CCDC163-206ENST00000629009 C1QBPQ07021 282 aaKnown RBP11.13□□□□□ -0.63
CCDC163-206ENST00000629009 PSMD1Q99460 953 aa11.13□□□□□ -0.63
CCDC163-206ENST00000629009 ADAMTS8Q9UP79 889 aa11.13□□□□□ -0.63
CCDC163-206ENST00000629009 HSP90AB1P08238 724 aaKnown RBP11.12□□□□□ -0.63
CCDC163-206ENST00000629009 PHKG2P15735 406 aa11.12□□□□□ -0.63
CCDC163-206ENST00000629009 BCL2L13Q9BXK5 485 aa11.12□□□□□ -0.63
CCDC163-206ENST00000629009 PPP1R12CQ9BZL4 782 aa11.12□□□□□ -0.63
CCDC163-206ENST00000629009 KDM4AO75164 1064 aa11.11□□□□□ -0.63
CCDC163-206ENST00000629009 C1QTNF8P60827 252 aa11.11□□□□□ -0.63
CCDC163-206ENST00000629009 DNAJC14Q6Y2X3 702 aaPredicted RBP11.11□□□□□ -0.63
CCDC163-206ENST00000629009 PNNQ9H307 717 aaKnown RBP11.11□□□□□ -0.63
CCDC163-206ENST00000629009 ANO8Q9HCE9 1232 aaPredicted RBP11.11□□□□□ -0.63
CCDC163-206ENST00000629009 NHSQ6T4R5 1651 aa11.11□□□□□ -0.63
CCDC163-206ENST00000629009 COL24A1Q17RW2 1714 aa11.11□□□□□ -0.63
CCDC163-206ENST00000629009 C1orf141Q5JVX7 400 aa11.11□□□□□ -0.63
CCDC163-206ENST00000629009 ZNF530Q6P9A1 599 aaPredicted RBP11.11□□□□□ -0.63
CCDC163-206ENST00000629009 ZNF592Q92610 1267 aa11.11□□□□□ -0.63
CCDC163-206ENST00000629009 PDGFDQ9GZP0 370 aaPredicted RBP11.11□□□□□ -0.63
CCDC163-206ENST00000629009 PLSCR1O15162 318 aa11.1□□□□□ -0.63
CCDC163-206ENST00000629009 PRKAR2BP31323 418 aa11.1□□□□□ -0.63
CCDC163-206ENST00000629009 AKAP4Q5JQC9 854 aa11.1□□□□□ -0.63
CCDC163-206ENST00000629009 ADAMTS19Q8TE59 1207 aa11.1□□□□□ -0.63
CCDC163-206ENST00000629009 ACSBG1Q96GR2 724 aa11.1□□□□□ -0.63
CCDC163-206ENST00000629009 DCAF5Q96JK2 942 aa11.1□□□□□ -0.63
CCDC163-206ENST00000629009 PAPPAQ13219 1627 aa11.1□□□□□ -0.63
CCDC163-206ENST00000629009 PTGER2P43116 358 aa11.09□□□□□ -0.63
CCDC163-206ENST00000629009 PRIM1P49642 420 aaKnown RBP11.09□□□□□ -0.63
CCDC163-206ENST00000629009 PTGDRQ13258 359 aa11.09□□□□□ -0.63
CCDC163-206ENST00000629009 GAS2L2Q8NHY3 880 aa11.09□□□□□ -0.63
CCDC163-206ENST00000629009 ZBED9Q6R2W3 1325 aa11.09□□□□□ -0.63
CCDC163-206ENST00000629009 QSER1Q2KHR3 1735 aa11.08□□□□□ -0.64
CCDC163-206ENST00000629009 NEFMP07197 916 aa11.08□□□□□ -0.64
CCDC163-206ENST00000629009 MTHFSDQ2M296 383 aaKnown RBP11.08□□□□□ -0.64
CCDC163-206ENST00000629009 CC2D2BQ6DHV5 1058 aa11.08□□□□□ -0.64
CCDC163-206ENST00000629009 DOT1LQ8TEK3 1739 aa11.08□□□□□ -0.64
CCDC163-206ENST00000629009 TUBGCP6Q96RT7 1819 aa11.08□□□□□ -0.64
CCDC163-206ENST00000629009 ERVV-2B6SEH9 535 aa11.08□□□□□ -0.64
CCDC163-206ENST00000629009 ATG7O95352 703 aa11.08□□□□□ -0.64
CCDC163-206ENST00000629009 LMOD1P29536 600 aaPredicted RBP11.08□□□□□ -0.64
CCDC163-206ENST00000629009 PPP2R2DQ66LE6 453 aa11.08□□□□□ -0.64
CCDC163-206ENST00000629009 PTF1AQ7RTS3 328 aa11.08□□□□□ -0.64
CCDC163-206ENST00000629009 SYTL4Q96C24 671 aaPredicted RBP11.08□□□□□ -0.64
CCDC163-206ENST00000629009 SF3A1Q15459 793 aaKnown RBP11.07□□□□□ -0.64
CCDC163-206ENST00000629009 CCDC146Q8IYE0 955 aa11.07□□□□□ -0.64
CCDC163-206ENST00000629009 GIPC2Q8TF65 315 aa11.07□□□□□ -0.64
CCDC163-206ENST00000629009 PHACTR3Q96KR7 559 aa11.07□□□□□ -0.64
CCDC163-206ENST00000629009 CEP350Q5VT06 3117 aa11.06□□□□□ -0.64
CCDC163-206ENST00000629009 TAF7LQ5H9L4 462 aa11.06□□□□□ -0.64
CCDC163-206ENST00000629009 NOL8Q76FK4 1167 aaKnown RBP11.06□□□□□ -0.64
CCDC163-206ENST00000629009 RUNDC1Q96C34 613 aa11.06□□□□□ -0.64
CCDC163-206ENST00000629009 PLEKHF1Q96S99 279 aa11.06□□□□□ -0.64
CCDC163-206ENST00000629009 TOGARAM1Q9Y4F4 1720 aa11.06□□□□□ -0.64
CCDC163-206ENST00000629009 KDM6AO15550 1401 aaPredicted RBP11.05□□□□□ -0.64
CCDC163-206ENST00000629009 MAPK8IP3Q9UPT6 1336 aa11.05□□□□□ -0.64
CCDC163-206ENST00000629009 PALM3A6NDB9 673 aaPredicted RBP11.05□□□□□ -0.64
CCDC163-206ENST00000629009 GNAT3A8MTJ3 354 aa11.05□□□□□ -0.64
CCDC163-206ENST00000629009 ZBTB7AO95365 584 aa11.05□□□□□ -0.64
CCDC163-206ENST00000629009 DSG2Q14126 1118 aa11.05□□□□□ -0.64
CCDC163-206ENST00000629009 MPRIPQ6WCQ1 1025 aa11.05□□□□□ -0.64
CCDC163-206ENST00000629009 NGEFQ8N5V2 710 aa11.05□□□□□ -0.64
CCDC163-206ENST00000629009 FAM217BQ9NTX9 383 aaPredicted RBP11.05□□□□□ -0.64
CCDC163-206ENST00000629009 TMOD3Q9NYL9 352 aa11.05□□□□□ -0.64
CCDC163-206ENST00000629009 GOLGB1Q14789 3259 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms