RNA–Protein interactions for RNA: ENST00000628890.1

UBE3A-217, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 3

Gene UBE3A, Length 424 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-217ENST00000628890 NKAPLQ5M9Q1 402 aa8.47□□□□□ -1.05
UBE3A-217ENST00000628890 POTEAQ6S8J7 498 aa8.47□□□□□ -1.05
UBE3A-217ENST00000628890 STARD13Q9Y3M8 1113 aa8.47□□□□□ -1.05
UBE3A-217ENST00000628890 SPDYE3A6NKU9 549 aa8.46□□□□□ -1.06
UBE3A-217ENST00000628890 SKIP12755 728 aa8.46□□□□□ -1.06
UBE3A-217ENST00000628890 RSPO4Q2I0M5 234 aaPredicted RBP8.46□□□□□ -1.06
UBE3A-217ENST00000628890 LRRC69Q6ZNQ3 347 aa8.46□□□□□ -1.06
UBE3A-217ENST00000628890 COG6Q9Y2V7 657 aa8.46□□□□□ -1.06
UBE3A-217ENST00000628890 ZBTB7BO15156 539 aaPredicted RBP8.45□□□□□ -1.06
UBE3A-217ENST00000628890 SFSWAPQ12872 951 aaKnown RBP8.45□□□□□ -1.06
UBE3A-217ENST00000628890 SLC30A3Q99726 388 aa8.45□□□□□ -1.06
UBE3A-217ENST00000628890 HIRAP54198 1017 aaPredicted RBP8.44□□□□□ -1.06
UBE3A-217ENST00000628890 KCNQ4P56696 695 aa8.44□□□□□ -1.06
UBE3A-217ENST00000628890 NCOA4Q13772 614 aa8.44□□□□□ -1.06
UBE3A-217ENST00000628890 C1orf53Q5VUE5 145 aa8.44□□□□□ -1.06
UBE3A-217ENST00000628890 SLC9A9Q8IVB4 645 aa8.44□□□□□ -1.06
UBE3A-217ENST00000628890 TNS4Q8IZW8 715 aa8.44□□□□□ -1.06
UBE3A-217ENST00000628890 MICALL1Q8N3F8 863 aa8.44□□□□□ -1.06
UBE3A-217ENST00000628890 SERTM1A2A2V5 107 aa8.43□□□□□ -1.06
UBE3A-217ENST00000628890 PRRT3Q5FWE3 981 aa8.43□□□□□ -1.06
UBE3A-217ENST00000628890 M0R082 166 aa8.42□□□□□ -1.06
UBE3A-217ENST00000628890 C20orf204Q6ZNR8 217 aa8.42□□□□□ -1.06
UBE3A-217ENST00000628890 ZNF417Q8TAU3 575 aa8.42□□□□□ -1.06
UBE3A-217ENST00000628890 PSMG3-AS1Q96PY0 264 aa8.42□□□□□ -1.06
UBE3A-217ENST00000628890 ZNF587Q96SQ5 575 aaPredicted RBP8.42□□□□□ -1.06
UBE3A-217ENST00000628890 NID1P14543 1247 aa8.41□□□□□ -1.06
UBE3A-217ENST00000628890 ZMYM1Q5SVZ6 1142 aa8.41□□□□□ -1.06
UBE3A-217ENST00000628890 SH3PXD2AQ5TCZ1 1133 aa8.41□□□□□ -1.06
UBE3A-217ENST00000628890 NEUROD4Q9HD90 331 aa8.41□□□□□ -1.06
UBE3A-217ENST00000628890 TPSG1Q9NRR2 321 aa8.41□□□□□ -1.06
UBE3A-217ENST00000628890 USP17L5A8MUK1 530 aa8.4□□□□□ -1.06
UBE3A-217ENST00000628890 M0R2N6 131 aa8.4□□□□□ -1.06
UBE3A-217ENST00000628890 ALBP02768 609 aa8.4□□□□□ -1.06
UBE3A-217ENST00000628890 SPEM2Q0P670 501 aa8.4□□□□□ -1.06
UBE3A-217ENST00000628890 TBCELQ5QJ74 424 aa8.4□□□□□ -1.06
UBE3A-217ENST00000628890 TRIM50Q86XT4 487 aa8.4□□□□□ -1.06
UBE3A-217ENST00000628890 PLEKHM2Q8IWE5 1019 aa8.4□□□□□ -1.06
UBE3A-217ENST00000628890 ZNF232Q9UNY5 417 aa8.4□□□□□ -1.06
UBE3A-217ENST00000628890 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.39□□□□□ -1.07
UBE3A-217ENST00000628890 APBA3O96018 575 aa8.39□□□□□ -1.07
UBE3A-217ENST00000628890 PSME1Q06323 249 aa8.39□□□□□ -1.07
UBE3A-217ENST00000628890 TRIM28Q13263 835 aaKnown RBP8.39□□□□□ -1.07
UBE3A-217ENST00000628890 FOXD4L6Q3SYB3 417 aaPredicted RBP8.39□□□□□ -1.07
UBE3A-217ENST00000628890 TPRNQ4KMQ1 711 aa8.39□□□□□ -1.07
UBE3A-217ENST00000628890 FOXD4L3Q6VB84 417 aaPredicted RBP8.39□□□□□ -1.07
UBE3A-217ENST00000628890 KRTAP9-2Q9BYQ4 174 aa8.39□□□□□ -1.07
UBE3A-217ENST00000628890 ANKIB1Q9P2G1 1089 aa8.39□□□□□ -1.07
UBE3A-217ENST00000628890 ADH7P40394 386 aa8.38□□□□□ -1.07
UBE3A-217ENST00000628890 PSMA6P60900 246 aaKnown RBP8.38□□□□□ -1.07
UBE3A-217ENST00000628890 C8orf86Q6ZUL3 223 aa8.38□□□□□ -1.07
UBE3A-217ENST00000628890 ILDR2Q71H61 639 aa8.38□□□□□ -1.07
UBE3A-217ENST00000628890 DEPDC4Q8N2C3 294 aa8.38□□□□□ -1.07
UBE3A-217ENST00000628890 RHPN1Q8TCX5 695 aa8.38□□□□□ -1.07
UBE3A-217ENST00000628890 NACC1Q96RE7 527 aa8.38□□□□□ -1.07
UBE3A-217ENST00000628890 KIAA1024Q9UPX6 916 aa8.38□□□□□ -1.07
UBE3A-217ENST00000628890 DYRK3O43781 588 aa8.37□□□□□ -1.07
UBE3A-217ENST00000628890 CLDN10P78369 228 aa8.37□□□□□ -1.07
UBE3A-217ENST00000628890 NEUROD1Q13562 356 aa8.37□□□□□ -1.07
UBE3A-217ENST00000628890 CCDC102BQ68D86 513 aa8.37□□□□□ -1.07
UBE3A-217ENST00000628890 BRD7Q9NPI1 651 aa8.37□□□□□ -1.07
UBE3A-217ENST00000628890 FAM229AH3BQW9 127 aa8.36□□□□□ -1.07
UBE3A-217ENST00000628890 DKK1O94907 266 aa8.36□□□□□ -1.07
UBE3A-217ENST00000628890 ATP1A2P50993 1020 aa8.36□□□□□ -1.07
UBE3A-217ENST00000628890 TSPAN10Q9H1Z9 355 aaPredicted RBP8.36□□□□□ -1.07
UBE3A-217ENST00000628890 KCNH4Q9UQ05 1017 aa8.36□□□□□ -1.07
UBE3A-217ENST00000628890 TYRO3Q06418 890 aa8.35□□□□□ -1.07
UBE3A-217ENST00000628890 GRIK4Q16099 956 aa8.35□□□□□ -1.07
UBE3A-217ENST00000628890 STAG2Q8N3U4 1231 aa8.35□□□□□ -1.07
UBE3A-217ENST00000628890 LARGE2Q8N3Y3 721 aa8.35□□□□□ -1.07
UBE3A-217ENST00000628890 ZNF280CQ8ND82 737 aa8.35□□□□□ -1.07
UBE3A-217ENST00000628890 TPCN2Q8NHX9 752 aa8.35□□□□□ -1.07
UBE3A-217ENST00000628890 ADAMTS19Q8TE59 1207 aa8.35□□□□□ -1.07
UBE3A-217ENST00000628890 SUSD3Q96L08 255 aa8.35□□□□□ -1.07
UBE3A-217ENST00000628890 CEP63Q96MT8 703 aa8.35□□□□□ -1.07
UBE3A-217ENST00000628890 PHACTR1Q9C0D0 580 aa8.35□□□□□ -1.07
UBE3A-217ENST00000628890 EFCC1Q9HA90 598 aa8.35□□□□□ -1.07
UBE3A-217ENST00000628890 HCN4Q9Y3Q4 1203 aa8.35□□□□□ -1.07
UBE3A-217ENST00000628890 SFI1A8K8P3 1242 aa8.34□□□□□ -1.07
UBE3A-217ENST00000628890 C9orf172C9J069 976 aa8.34□□□□□ -1.07
UBE3A-217ENST00000628890 WWC1Q8IX03 1113 aa8.34□□□□□ -1.07
UBE3A-217ENST00000628890 POM121Q96HA1 1249 aa8.34□□□□□ -1.07
UBE3A-217ENST00000628890 HSH2DQ96JZ2 352 aa8.34□□□□□ -1.07
UBE3A-217ENST00000628890 KRTAP9-6A0A140TA67 174 aa8.33□□□□□ -1.08
UBE3A-217ENST00000628890 PALM3A6NDB9 673 aaPredicted RBP8.33□□□□□ -1.08
UBE3A-217ENST00000628890 C21orf2O43822 256 aa8.33□□□□□ -1.08
UBE3A-217ENST00000628890 ADGRE1Q14246 886 aa8.33□□□□□ -1.08
UBE3A-217ENST00000628890 SIX5Q8N196 739 aa8.33□□□□□ -1.08
UBE3A-217ENST00000628890 USP17L3A6NCW0 530 aa8.32□□□□□ -1.08
UBE3A-217ENST00000628890 USP17L4A6NCW7 530 aa8.32□□□□□ -1.08
UBE3A-217ENST00000628890 LILRB5O75023 590 aa8.32□□□□□ -1.08
UBE3A-217ENST00000628890 H2AFB1P0C5Y9 115 aa8.32□□□□□ -1.08
UBE3A-217ENST00000628890 H2AFB2P0C5Z0 115 aa8.32□□□□□ -1.08
UBE3A-217ENST00000628890 SELPP16109 830 aa8.32□□□□□ -1.08
UBE3A-217ENST00000628890 ARTNQ5T4W7 220 aa8.32□□□□□ -1.08
UBE3A-217ENST00000628890 USP17L2Q6R6M4 530 aa8.32□□□□□ -1.08
UBE3A-217ENST00000628890 USP17L1Q7RTZ2 530 aa8.32□□□□□ -1.08
UBE3A-217ENST00000628890 RAB44Q7Z6P3 723 aaPredicted RBP8.32□□□□□ -1.08
UBE3A-217ENST00000628890 UCN2Q96RP3 112 aa8.32□□□□□ -1.08
UBE3A-217ENST00000628890 ELNP15502 786 aa8.31□□□□□ -1.08
UBE3A-217ENST00000628890 PRSS36Q5K4E3 855 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms