RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 CHPF2Q9P2E5 772 aa17.6■□□□□ 0.41
SOX2-OT-248ENST00000628496 CD2APQ9Y5K6 639 aa17.6■□□□□ 0.41
SOX2-OT-248ENST00000628496 C10orf71Q711Q0 1435 aa17.6■□□□□ 0.41
SOX2-OT-248ENST00000628496 BCORQ6W2J9 1755 aa17.6■□□□□ 0.41
SOX2-OT-248ENST00000628496 DDX21Q9NR30 783 aaKnown RBP eCLIP17.59■□□□□ 0.41
SOX2-OT-248ENST00000628496 HLFQ16534 295 aa17.58■□□□□ 0.4
SOX2-OT-248ENST00000628496 CLEC4GQ6UXB4 293 aa17.58■□□□□ 0.4
SOX2-OT-248ENST00000628496 MAP3K15Q6ZN16 1313 aa17.57■□□□□ 0.4
SOX2-OT-248ENST00000628496 RGL2O15211 777 aa17.57■□□□□ 0.4
SOX2-OT-248ENST00000628496 KIF6Q6ZMV9 814 aa17.57■□□□□ 0.4
SOX2-OT-248ENST00000628496 CARMIL3Q8ND23 1372 aa17.56■□□□□ 0.4
SOX2-OT-248ENST00000628496 ERVV-1B6SEH8 477 aa17.56■□□□□ 0.4
SOX2-OT-248ENST00000628496 SERPINB2P05120 415 aa17.56■□□□□ 0.4
SOX2-OT-248ENST00000628496 XAGE3Q8WTP9 111 aa17.56■□□□□ 0.4
SOX2-OT-248ENST00000628496 ZBTB3Q9H5J0 574 aa17.56■□□□□ 0.4
SOX2-OT-248ENST00000628496 DBF4Q9UBU7 674 aaPredicted RBP17.56■□□□□ 0.4
SOX2-OT-248ENST00000628496 ZNF652Q9Y2D9 606 aa17.56■□□□□ 0.4
SOX2-OT-248ENST00000628496 COPS6Q7L5N1 327 aa17.55■□□□□ 0.4
SOX2-OT-248ENST00000628496 SETDB2Q96T68 719 aa17.55■□□□□ 0.4
SOX2-OT-248ENST00000628496 MYH16Q9H6N6 1097 aa17.55■□□□□ 0.4
SOX2-OT-248ENST00000628496 PXDNLA1KZ92 1463 aa17.55■□□□□ 0.4
SOX2-OT-248ENST00000628496 GOLGA2Q08379 1002 aa17.54■□□□□ 0.4
SOX2-OT-248ENST00000628496 AIMP1Q12904 312 aaKnown RBP17.54■□□□□ 0.4
SOX2-OT-248ENST00000628496 TWISTNBQ3B726 338 aaPredicted RBP17.54■□□□□ 0.4
SOX2-OT-248ENST00000628496 NRXN2Q9P2S2 1712 aa17.54■□□□□ 0.4
SOX2-OT-248ENST00000628496 EXOSC9Q06265 439 aaKnown RBP17.53■□□□□ 0.4
SOX2-OT-248ENST00000628496 RNF216Q9NWF9 866 aaPredicted RBP17.53■□□□□ 0.4
SOX2-OT-248ENST00000628496 NIP7Q9Y221 180 aaKnown RBP eCLIP17.53■□□□□ 0.4
SOX2-OT-248ENST00000628496 ATP10DQ9P241 1426 aa17.53■□□□□ 0.4
SOX2-OT-248ENST00000628496 TGFB2P61812 414 aa17.52■□□□□ 0.4
SOX2-OT-248ENST00000628496 CCDC30Q5VVM6 783 aa17.52■□□□□ 0.4
SOX2-OT-248ENST00000628496 PRR5LQ6MZQ0 368 aa17.52■□□□□ 0.4
SOX2-OT-248ENST00000628496 GIGYF2Q6Y7W6 1299 aaKnown RBP17.52■□□□□ 0.4
SOX2-OT-248ENST00000628496 HYPKQ9NX55 129 aa17.52■□□□□ 0.4
SOX2-OT-248ENST00000628496 KIF13BQ9NQT8 1826 aa17.51■□□□□ 0.39
SOX2-OT-248ENST00000628496 TCERG1O14776 1098 aaKnown RBP17.51■□□□□ 0.39
SOX2-OT-248ENST00000628496 PHAXQ9H814 394 aaKnown RBP17.51■□□□□ 0.39
SOX2-OT-248ENST00000628496 KIAA1551Q9HCM1 1747 aa17.51■□□□□ 0.39
SOX2-OT-248ENST00000628496 UBN2Q6ZU65 1347 aa17.5■□□□□ 0.39
SOX2-OT-248ENST00000628496 A0A0G2JLW4 131 aa17.5■□□□□ 0.39
SOX2-OT-248ENST00000628496 E9PSI1 815 aa17.5■□□□□ 0.39
SOX2-OT-248ENST00000628496 VAMP4O75379 141 aa17.5■□□□□ 0.39
SOX2-OT-248ENST00000628496 SLFN5Q08AF3 891 aa17.5■□□□□ 0.39
SOX2-OT-248ENST00000628496 ZNF34Q8IZ26 560 aa17.5■□□□□ 0.39
SOX2-OT-248ENST00000628496 CCDC24Q8N4L8 307 aa17.5■□□□□ 0.39
SOX2-OT-248ENST00000628496 CNBD1Q8NA66 436 aa17.5■□□□□ 0.39
SOX2-OT-248ENST00000628496 CDCA7LQ96GN5 454 aa17.5■□□□□ 0.39
SOX2-OT-248ENST00000628496 DPEP1P16444 411 aa17.49■□□□□ 0.39
SOX2-OT-248ENST00000628496 YBX3P16989 372 aaKnown RBP eCLIP17.49■□□□□ 0.39
SOX2-OT-248ENST00000628496 GPTP24298 496 aa17.49■□□□□ 0.39
SOX2-OT-248ENST00000628496 NBPF5PQ86XG9 351 aaPredicted RBP17.49■□□□□ 0.39
SOX2-OT-248ENST00000628496 CHMP4AQ9BY43 222 aa17.49■□□□□ 0.39
SOX2-OT-248ENST00000628496 WWC3Q9ULE0 1092 aa17.49■□□□□ 0.39
SOX2-OT-248ENST00000628496 AFDNP55196 1824 aaKnown RBP17.49■□□□□ 0.39
SOX2-OT-248ENST00000628496 FAM177BA6PVY3 158 aa17.48■□□□□ 0.39
SOX2-OT-248ENST00000628496 KCNA3P22001 575 aa17.48■□□□□ 0.39
SOX2-OT-248ENST00000628496 CHRNA5P30532 468 aa17.48■□□□□ 0.39
SOX2-OT-248ENST00000628496 ANKRD13DQ6ZTN6 518 aa17.48■□□□□ 0.39
SOX2-OT-248ENST00000628496 PELP1Q8IZL8 1130 aaKnown RBP17.48■□□□□ 0.39
SOX2-OT-248ENST00000628496 PLBD2Q8NHP8 589 aa17.48■□□□□ 0.39
SOX2-OT-248ENST00000628496 GPR162Q16538 588 aa17.47■□□□□ 0.39
SOX2-OT-248ENST00000628496 STK31Q9BXU1 1019 aa17.47■□□□□ 0.39
SOX2-OT-248ENST00000628496 NPHP1O15259 732 aa17.46■□□□□ 0.39
SOX2-OT-248ENST00000628496 ST5P78524 1137 aa17.46■□□□□ 0.39
SOX2-OT-248ENST00000628496 SUSD4Q5VX71 490 aa17.46■□□□□ 0.39
SOX2-OT-248ENST00000628496 TRMT2AQ8IZ69 625 aaKnown RBP17.46■□□□□ 0.39
SOX2-OT-248ENST00000628496 BRIP1Q9BX63 1249 aa17.46■□□□□ 0.39
SOX2-OT-248ENST00000628496 IBTKQ9P2D0 1353 aaPredicted RBP17.45■□□□□ 0.38
SOX2-OT-248ENST00000628496 DCAF8L1A6NGE4 600 aa17.45■□□□□ 0.38
SOX2-OT-248ENST00000628496 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
SOX2-OT-248ENST00000628496 HNRNPUQ00839 825 aaKnown RBP eCLIP17.45■□□□□ 0.38
SOX2-OT-248ENST00000628496 TCIRG1Q13488 830 aa17.45■□□□□ 0.38
SOX2-OT-248ENST00000628496 HSP90AB3PQ58FF7 597 aa17.45■□□□□ 0.38
SOX2-OT-248ENST00000628496 TPTE2Q6XPS3 522 aa17.45■□□□□ 0.38
SOX2-OT-248ENST00000628496 G2E3Q7L622 706 aa17.45■□□□□ 0.38
SOX2-OT-248ENST00000628496 N4BP2Q86UW6 1770 aaPredicted RBP17.45■□□□□ 0.38
SOX2-OT-248ENST00000628496 ABCC12Q96J65 1359 aa17.44■□□□□ 0.38
SOX2-OT-248ENST00000628496 NTSR2O95665 410 aa17.44■□□□□ 0.38
SOX2-OT-248ENST00000628496 PARP10Q53GL7 1025 aa17.44■□□□□ 0.38
SOX2-OT-248ENST00000628496 NLRP10Q86W26 655 aa17.44■□□□□ 0.38
SOX2-OT-248ENST00000628496 NUTM1Q86Y26 1132 aa17.44■□□□□ 0.38
SOX2-OT-248ENST00000628496 NYXQ9GZU5 481 aa17.44■□□□□ 0.38
SOX2-OT-248ENST00000628496 NUP98P52948 1817 aa17.44■□□□□ 0.38
SOX2-OT-248ENST00000628496 PDE6BP35913 854 aa17.43■□□□□ 0.38
SOX2-OT-248ENST00000628496 RIC3Q7Z5B4 369 aa17.43■□□□□ 0.38
SOX2-OT-248ENST00000628496 C2CD5Q86YS7 1000 aa17.43■□□□□ 0.38
SOX2-OT-248ENST00000628496 ADCY9O60503 1353 aa17.42■□□□□ 0.38
SOX2-OT-248ENST00000628496 ANKRD31Q8N7Z5 1873 aa17.42■□□□□ 0.38
SOX2-OT-248ENST00000628496 ZBTB22O15209 634 aa17.42■□□□□ 0.38
SOX2-OT-248ENST00000628496 ERFEQ4G0M1 354 aa17.42■□□□□ 0.38
SOX2-OT-248ENST00000628496 ISCA1Q9BUE6 129 aa17.42■□□□□ 0.38
SOX2-OT-248ENST00000628496 KLRG2A4D1S0 409 aaPredicted RBP17.41■□□□□ 0.38
SOX2-OT-248ENST00000628496 ATP5J2-PTCD1G3V325 749 aa17.41■□□□□ 0.38
SOX2-OT-248ENST00000628496 H0YIN7 160 aa17.41■□□□□ 0.38
SOX2-OT-248ENST00000628496 DDX58O95786 925 aaKnown RBP17.41■□□□□ 0.38
SOX2-OT-248ENST00000628496 GTF2E1P29083 439 aaPredicted RBP17.41■□□□□ 0.38
SOX2-OT-248ENST00000628496 FLIIQ13045 1269 aa17.41■□□□□ 0.38
SOX2-OT-248ENST00000628496 PPP1R42Q7Z4L9 355 aa17.41■□□□□ 0.38
SOX2-OT-248ENST00000628496 ZNF428Q96B54 188 aa17.41■□□□□ 0.38
SOX2-OT-248ENST00000628496 UTP14AQ9BVJ6 771 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms