RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 RUNDC1Q96C34 613 aa10.67□□□□□ -0.7
SPTAN1-213ENST00000627809 ATP10DQ9P241 1426 aa10.67□□□□□ -0.7
SPTAN1-213ENST00000627809 UBN2Q6ZU65 1347 aa10.66□□□□□ -0.7
SPTAN1-213ENST00000627809 FAM177BA6PVY3 158 aa10.66□□□□□ -0.7
SPTAN1-213ENST00000627809 ZPR1O75312 459 aa10.66□□□□□ -0.7
SPTAN1-213ENST00000627809 MYL6BP14649 208 aa10.66□□□□□ -0.7
SPTAN1-213ENST00000627809 IL6STP40189 918 aaPredicted RBP10.66□□□□□ -0.7
SPTAN1-213ENST00000627809 RASSF7Q02833 373 aa10.66□□□□□ -0.7
SPTAN1-213ENST00000627809 DZIP3Q86Y13 1208 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-213ENST00000627809 BCS1LQ9Y276 419 aa10.66□□□□□ -0.7
SPTAN1-213ENST00000627809 LAS1LQ9Y4W2 734 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-213ENST00000627809 PARP3Q9Y6F1 533 aa10.66□□□□□ -0.7
SPTAN1-213ENST00000627809 COL4A5P29400 1685 aa10.66□□□□□ -0.7
SPTAN1-213ENST00000627809 STARD3NLO95772 234 aa10.65□□□□□ -0.7
SPTAN1-213ENST00000627809 SYNE4Q8N205 404 aa10.65□□□□□ -0.7
SPTAN1-213ENST00000627809 PNISRQ8TF01 805 aaKnown RBP10.65□□□□□ -0.7
SPTAN1-213ENST00000627809 TSPYL4Q9UJ04 414 aa10.65□□□□□ -0.7
SPTAN1-213ENST00000627809 SPEF2Q9C093 1822 aa10.65□□□□□ -0.71
SPTAN1-213ENST00000627809 CHL1O00533 1208 aa10.64□□□□□ -0.71
SPTAN1-213ENST00000627809 ZNF853P0CG23 659 aa10.64□□□□□ -0.71
SPTAN1-213ENST00000627809 EIF2S2P20042 333 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-213ENST00000627809 WDR43Q15061 677 aaKnown RBP eCLIP10.64□□□□□ -0.71
SPTAN1-213ENST00000627809 TSPYL6Q8N831 410 aa10.64□□□□□ -0.71
SPTAN1-213ENST00000627809 ZNF526Q8TF50 670 aaPredicted RBP10.64□□□□□ -0.71
SPTAN1-213ENST00000627809 TSR2Q969E8 191 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-213ENST00000627809 ZBTB3Q9H5J0 574 aa10.64□□□□□ -0.71
SPTAN1-213ENST00000627809 SPINK5Q9NQ38 1064 aaPredicted RBP10.64□□□□□ -0.71
SPTAN1-213ENST00000627809 MBIPQ9NS73 344 aa10.64□□□□□ -0.71
SPTAN1-213ENST00000627809 TCERG1O14776 1098 aaKnown RBP10.63□□□□□ -0.71
SPTAN1-213ENST00000627809 GPTP24298 496 aa10.63□□□□□ -0.71
SPTAN1-213ENST00000627809 NUTM1Q86Y26 1132 aa10.63□□□□□ -0.71
SPTAN1-213ENST00000627809 ZNF219Q9P2Y4 722 aaPredicted RBP10.63□□□□□ -0.71
SPTAN1-213ENST00000627809 SALL2Q9Y467 1007 aaPredicted RBP10.63□□□□□ -0.71
SPTAN1-213ENST00000627809 CCER2I3L3R5 266 aa10.62□□□□□ -0.71
SPTAN1-213ENST00000627809 ELL2O00472 640 aaPredicted RBP10.62□□□□□ -0.71
SPTAN1-213ENST00000627809 C8orf58Q8NAV2 365 aa10.62□□□□□ -0.71
SPTAN1-213ENST00000627809 PNNQ9H307 717 aaKnown RBP10.62□□□□□ -0.71
SPTAN1-213ENST00000627809 MRS2Q9HD23 443 aa10.62□□□□□ -0.71
SPTAN1-213ENST00000627809 CHPF2Q9P2E5 772 aa10.62□□□□□ -0.71
SPTAN1-213ENST00000627809 SNED1Q8TER0 1413 aa10.61□□□□□ -0.71
SPTAN1-213ENST00000627809 NFKBIEO00221 500 aa10.61□□□□□ -0.71
SPTAN1-213ENST00000627809 C2CD5Q86YS7 1000 aa10.61□□□□□ -0.71
SPTAN1-213ENST00000627809 MIER1Q8N108 512 aa10.61□□□□□ -0.71
SPTAN1-213ENST00000627809 CEP350Q5VT06 3117 aa10.6□□□□□ -0.71
SPTAN1-213ENST00000627809 TGFB2P61812 414 aa10.6□□□□□ -0.71
SPTAN1-213ENST00000627809 ERFEQ4G0M1 354 aa10.6□□□□□ -0.71
SPTAN1-213ENST00000627809 XAGE3Q8WTP9 111 aa10.6□□□□□ -0.71
SPTAN1-213ENST00000627809 TEX13AQ9BXU3 409 aaPredicted RBP10.6□□□□□ -0.71
SPTAN1-213ENST00000627809 MAP3K15Q6ZN16 1313 aa10.59□□□□□ -0.71
SPTAN1-213ENST00000627809 NEFMP07197 916 aa10.59□□□□□ -0.71
SPTAN1-213ENST00000627809 AIMP1Q12904 312 aaKnown RBP10.59□□□□□ -0.71
SPTAN1-213ENST00000627809 SUSD4Q5VX71 490 aa10.59□□□□□ -0.71
SPTAN1-213ENST00000627809 ARHGAP27Q6ZUM4 889 aa10.59□□□□□ -0.71
SPTAN1-213ENST00000627809 PHAXQ9H814 394 aaKnown RBP10.59□□□□□ -0.71
SPTAN1-213ENST00000627809 NIP7Q9Y221 180 aaKnown RBP eCLIP10.59□□□□□ -0.71
SPTAN1-213ENST00000627809 LRRC37AA6NMS7 1700 aa10.58□□□□□ -0.72
SPTAN1-213ENST00000627809 LTBP1Q14766 1721 aa10.58□□□□□ -0.72
SPTAN1-213ENST00000627809 NTSR2O95665 410 aa10.58□□□□□ -0.72
SPTAN1-213ENST00000627809 DUSP27Q5VZP5 1158 aa10.58□□□□□ -0.72
SPTAN1-213ENST00000627809 COPS6Q7L5N1 327 aa10.58□□□□□ -0.72
SPTAN1-213ENST00000627809 G2E3Q7L622 706 aa10.58□□□□□ -0.72
SPTAN1-213ENST00000627809 ZNF34Q8IZ26 560 aa10.58□□□□□ -0.72
SPTAN1-213ENST00000627809 CNBD1Q8NA66 436 aa10.58□□□□□ -0.72
SPTAN1-213ENST00000627809 A0A1B0GUL6 1792 aa10.57□□□□□ -0.72
SPTAN1-213ENST00000627809 DUOX1Q9NRD9 1551 aa10.57□□□□□ -0.72
SPTAN1-213ENST00000627809 MYH3P11055 1940 aa10.57□□□□□ -0.72
SPTAN1-213ENST00000627809 A0A087WZG4 1122 aa10.57□□□□□ -0.72
SPTAN1-213ENST00000627809 DCAF8L1A6NGE4 600 aa10.57□□□□□ -0.72
SPTAN1-213ENST00000627809 C21orf2O43822 256 aa10.57□□□□□ -0.72
SPTAN1-213ENST00000627809 C9orf131Q5VYM1 1079 aa10.57□□□□□ -0.72
SPTAN1-213ENST00000627809 JARID2Q92833 1246 aaPredicted RBP10.57□□□□□ -0.72
SPTAN1-213ENST00000627809 CFAP44Q96MT7 982 aa10.57□□□□□ -0.72
SPTAN1-213ENST00000627809 NMRK2Q9NPI5 230 aa10.57□□□□□ -0.72
SPTAN1-213ENST00000627809 PIM2Q9P1W9 311 aa10.57□□□□□ -0.72
SPTAN1-213ENST00000627809 SRGNP10124 158 aa10.56□□□□□ -0.72
SPTAN1-213ENST00000627809 DALRD3Q5D0E6 543 aaKnown RBP10.56□□□□□ -0.72
SPTAN1-213ENST00000627809 NBPF5PQ86XG9 351 aaPredicted RBP10.56□□□□□ -0.72
SPTAN1-213ENST00000627809 WWC1Q8IX03 1113 aa10.56□□□□□ -0.72
SPTAN1-213ENST00000627809 FAM9BQ8IZU0 186 aa10.56□□□□□ -0.72
SPTAN1-213ENST00000627809 ZNF622Q969S3 477 aaKnown RBP eCLIP10.56□□□□□ -0.72
SPTAN1-213ENST00000627809 SETDB2Q96T68 719 aa10.56□□□□□ -0.72
SPTAN1-213ENST00000627809 ZNF646O15015 1829 aaPredicted RBP10.56□□□□□ -0.72
SPTAN1-213ENST00000627809 ATP5J2-PTCD1G3V325 749 aa10.55□□□□□ -0.72
SPTAN1-213ENST00000627809 KIF3CO14782 793 aa10.55□□□□□ -0.72
SPTAN1-213ENST00000627809 GRIN3BO60391 1043 aa10.55□□□□□ -0.72
SPTAN1-213ENST00000627809 HDGFL1Q5TGJ6 251 aa10.55□□□□□ -0.72
SPTAN1-213ENST00000627809 PRPF40BQ6NWY9 871 aaKnown RBP10.55□□□□□ -0.72
SPTAN1-213ENST00000627809 C7orf43Q8WVR3 580 aa10.55□□□□□ -0.72
SPTAN1-213ENST00000627809 BRIP1Q9BX63 1249 aa10.55□□□□□ -0.72
SPTAN1-213ENST00000627809 SCN9AQ15858 1988 aa10.55□□□□□ -0.72
SPTAN1-213ENST00000627809 CACNA1FO60840 1977 aa10.54□□□□□ -0.72
SPTAN1-213ENST00000627809 KLRG2A4D1S0 409 aaPredicted RBP10.54□□□□□ -0.72
SPTAN1-213ENST00000627809 HCLS1P14317 486 aaPredicted RBP10.54□□□□□ -0.72
SPTAN1-213ENST00000627809 RTL5Q5HYW3 569 aaPredicted RBP10.54□□□□□ -0.72
SPTAN1-213ENST00000627809 GIGYF2Q6Y7W6 1299 aaKnown RBP10.54□□□□□ -0.72
SPTAN1-213ENST00000627809 IFT57Q9NWB7 429 aa10.54□□□□□ -0.72
SPTAN1-213ENST00000627809 FANCIQ9NVI1 1328 aa10.54□□□□□ -0.72
SPTAN1-213ENST00000627809 RIC1Q4ADV7 1423 aa10.53□□□□□ -0.72
SPTAN1-213ENST00000627809 ERVV-1B6SEH8 477 aa10.53□□□□□ -0.72
SPTAN1-213ENST00000627809 LMOD3Q0VAK6 560 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms