RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 SLX4Q8IY92 1834 aa22.05■■□□□ 1.12
TRIM29-221ENST00000627238 C21orf2O43822 256 aa22.04■■□□□ 1.12
TRIM29-221ENST00000627238 SNRPA1P09661 255 aaKnown RBP22.04■■□□□ 1.12
TRIM29-221ENST00000627238 PPP2R1AP30153 589 aa22.04■■□□□ 1.12
TRIM29-221ENST00000627238 ST5P78524 1137 aa22.04■■□□□ 1.12
TRIM29-221ENST00000627238 DPY19L2Q6NUT2 758 aa22.04■■□□□ 1.12
TRIM29-221ENST00000627238 CNGB1Q14028 1251 aaPredicted RBP22.03■■□□□ 1.12
TRIM29-221ENST00000627238 SOGA3Q5TF21 947 aa22.03■■□□□ 1.12
TRIM29-221ENST00000627238 RTF1Q92541 710 aaKnown RBP22.03■■□□□ 1.12
TRIM29-221ENST00000627238 KLRG2A4D1S0 409 aaPredicted RBP22.02■■□□□ 1.12
TRIM29-221ENST00000627238 U2AF1L5P0DN76 240 aaPredicted RBP22.02■■□□□ 1.12
TRIM29-221ENST00000627238 U2AF1Q01081 240 aaKnown RBP eCLIP22.02■■□□□ 1.12
TRIM29-221ENST00000627238 MASTLQ96GX5 879 aa22.02■■□□□ 1.12
TRIM29-221ENST00000627238 CACNA1SQ13698 1873 aa22.02■■□□□ 1.12
TRIM29-221ENST00000627238 PRPF40BQ6NWY9 871 aaKnown RBP22.01■■□□□ 1.11
TRIM29-221ENST00000627238 MCM10Q7L590 875 aa22.01■■□□□ 1.11
TRIM29-221ENST00000627238 CCDC24Q8N4L8 307 aa22.01■■□□□ 1.11
TRIM29-221ENST00000627238 TAOK3Q9H2K8 898 aa22.01■■□□□ 1.11
TRIM29-221ENST00000627238 ZNF652Q9Y2D9 606 aa22.01■■□□□ 1.11
TRIM29-221ENST00000627238 LAMB4A4D0S4 1761 aa22.01■■□□□ 1.11
TRIM29-221ENST00000627238 PRAMEF22A3QJZ6 481 aa22■■□□□ 1.11
TRIM29-221ENST00000627238 ERFEQ4G0M1 354 aa22■■□□□ 1.11
TRIM29-221ENST00000627238 C7orf43Q8WVR3 580 aa22■■□□□ 1.11
TRIM29-221ENST00000627238 NBPF26B4DH59 902 aa21.98■■□□□ 1.11
TRIM29-221ENST00000627238 NBPF10Q6P3W6 841 aaKnown RBP21.98■■□□□ 1.11
TRIM29-221ENST00000627238 NBPF15Q8N660 670 aa21.98■■□□□ 1.11
TRIM29-221ENST00000627238 NPHP1O15259 732 aa21.97■■□□□ 1.11
TRIM29-221ENST00000627238 TAF7Q15545 349 aaPredicted RBP21.97■■□□□ 1.11
TRIM29-221ENST00000627238 NBPF5PQ86XG9 351 aaPredicted RBP21.97■■□□□ 1.11
TRIM29-221ENST00000627238 KDM3BQ7LBC6 1761 aa21.97■■□□□ 1.11
TRIM29-221ENST00000627238 NPR1P16066 1061 aa21.96■■□□□ 1.11
TRIM29-221ENST00000627238 PIP4K2AP48426 406 aaPredicted RBP21.96■■□□□ 1.11
TRIM29-221ENST00000627238 ZNF219Q9P2Y4 722 aaPredicted RBP21.96■■□□□ 1.11
TRIM29-221ENST00000627238 SCN4AP35499 1836 aa21.95■■□□□ 1.1
TRIM29-221ENST00000627238 DCTN1Q14203 1278 aa21.95■■□□□ 1.1
TRIM29-221ENST00000627238 TPTE2Q6XPS3 522 aa21.95■■□□□ 1.1
TRIM29-221ENST00000627238 DLG5Q8TDM6 1919 aa21.95■■□□□ 1.1
TRIM29-221ENST00000627238 CCDC93Q567U6 631 aa21.94■■□□□ 1.1
TRIM29-221ENST00000627238 L3MBTL3Q96JM7 780 aaPredicted RBP21.93■■□□□ 1.1
TRIM29-221ENST00000627238 NIP7Q9Y221 180 aaKnown RBP eCLIP21.93■■□□□ 1.1
TRIM29-221ENST00000627238 PNISRQ8TF01 805 aaKnown RBP21.92■■□□□ 1.1
TRIM29-221ENST00000627238 RIC1Q4ADV7 1423 aa21.91■■□□□ 1.1
TRIM29-221ENST00000627238 DDNO94850 711 aaPredicted RBP21.91■■□□□ 1.1
TRIM29-221ENST00000627238 CHADLQ6NUI6 762 aa21.91■■□□□ 1.1
TRIM29-221ENST00000627238 SNED1Q8TER0 1413 aa21.9■■□□□ 1.1
TRIM29-221ENST00000627238 ERVV-1B6SEH8 477 aa21.9■■□□□ 1.1
TRIM29-221ENST00000627238 FKBP4Q02790 459 aaKnown RBP eCLIP21.9■■□□□ 1.1
TRIM29-221ENST00000627238 COL13A1Q5TAT6 717 aaPredicted RBP21.9■■□□□ 1.1
TRIM29-221ENST00000627238 PLEKHF1Q96S99 279 aa21.9■■□□□ 1.1
TRIM29-221ENST00000627238 NUP98P52948 1817 aa21.9■■□□□ 1.1
TRIM29-221ENST00000627238 IQCA1LA6NCM1 817 aa21.89■■□□□ 1.09
TRIM29-221ENST00000627238 HLFQ16534 295 aa21.89■■□□□ 1.09
TRIM29-221ENST00000627238 CRY2Q49AN0 593 aa21.89■■□□□ 1.09
TRIM29-221ENST00000627238 CREBZFQ9NS37 354 aa21.89■■□□□ 1.09
TRIM29-221ENST00000627238 IBTKQ9P2D0 1353 aaPredicted RBP21.88■■□□□ 1.09
TRIM29-221ENST00000627238 ALDH1B1P30837 517 aa21.88■■□□□ 1.09
TRIM29-221ENST00000627238 RTKN2Q8IZC4 609 aa21.88■■□□□ 1.09
TRIM29-221ENST00000627238 NEFMP07197 916 aa21.87■■□□□ 1.09
TRIM29-221ENST00000627238 ADAMTSL1Q8N6G6 1762 aa21.87■■□□□ 1.09
TRIM29-221ENST00000627238 EIF4A1P60842 406 aaKnown RBP21.86■■□□□ 1.09
TRIM29-221ENST00000627238 LDHDQ86WU2 507 aa21.86■■□□□ 1.09
TRIM29-221ENST00000627238 NYXQ9GZU5 481 aa21.86■■□□□ 1.09
TRIM29-221ENST00000627238 MIS18AQ9NYP9 233 aa21.86■■□□□ 1.09
TRIM29-221ENST00000627238 MAP3K15Q6ZN16 1313 aa21.85■■□□□ 1.09
TRIM29-221ENST00000627238 PASKQ96RG2 1323 aa21.85■■□□□ 1.09
TRIM29-221ENST00000627238 POTEIP0CG38 1075 aa21.85■■□□□ 1.09
TRIM29-221ENST00000627238 POTEJP0CG39 1038 aa21.85■■□□□ 1.09
TRIM29-221ENST00000627238 NFE2L2Q16236 605 aa21.85■■□□□ 1.09
TRIM29-221ENST00000627238 TAF1DQ9H5J8 278 aaPredicted RBP21.85■■□□□ 1.09
TRIM29-221ENST00000627238 ERBB4Q15303 1308 aa21.84■■□□□ 1.09
TRIM29-221ENST00000627238 HSPA1AP0DMV8 641 aaKnown RBP21.84■■□□□ 1.09
TRIM29-221ENST00000627238 HSPA1BP0DMV9 641 aaKnown RBP21.84■■□□□ 1.09
TRIM29-221ENST00000627238 PSMD1Q99460 953 aa21.84■■□□□ 1.09
TRIM29-221ENST00000627238 ABCC12Q96J65 1359 aa21.84■■□□□ 1.09
TRIM29-221ENST00000627238 FZD9O00144 591 aa21.83■■□□□ 1.09
TRIM29-221ENST00000627238 PNNQ9H307 717 aaKnown RBP21.83■■□□□ 1.09
TRIM29-221ENST00000627238 ZNF277Q9NRM2 450 aaPredicted RBP21.83■■□□□ 1.09
TRIM29-221ENST00000627238 ZNF541Q9H0D2 1346 aa21.82■■□□□ 1.08
TRIM29-221ENST00000627238 HOXA10P31260 410 aaPredicted RBP21.82■■□□□ 1.08
TRIM29-221ENST00000627238 CC2D2BQ6DHV5 1058 aa21.82■■□□□ 1.08
TRIM29-221ENST00000627238 GTF2E1P29083 439 aaPredicted RBP21.81■■□□□ 1.08
TRIM29-221ENST00000627238 IARSP41252 1262 aaKnown RBP21.81■■□□□ 1.08
TRIM29-221ENST00000627238 GRIPAP1Q4V328 841 aa21.81■■□□□ 1.08
TRIM29-221ENST00000627238 OLFM4Q6UX06 510 aa21.81■■□□□ 1.08
TRIM29-221ENST00000627238 FAM177BA6PVY3 158 aa21.8■■□□□ 1.08
TRIM29-221ENST00000627238 TTLL7Q6ZT98 887 aa21.8■■□□□ 1.08
TRIM29-221ENST00000627238 UBN2Q6ZU65 1347 aa21.8■■□□□ 1.08
TRIM29-221ENST00000627238 CNTNAP1P78357 1384 aa21.79■■□□□ 1.08
TRIM29-221ENST00000627238 ITGBL1O95965 494 aaPredicted RBP21.79■■□□□ 1.08
TRIM29-221ENST00000627238 KIF6Q6ZMV9 814 aa21.79■■□□□ 1.08
TRIM29-221ENST00000627238 ZNF34Q8IZ26 560 aa21.79■■□□□ 1.08
TRIM29-221ENST00000627238 GPC2Q8N158 579 aa21.79■■□□□ 1.08
TRIM29-221ENST00000627238 SYNE4Q8N205 404 aa21.79■■□□□ 1.08
TRIM29-221ENST00000627238 HACL1Q9UJ83 578 aa21.79■■□□□ 1.08
TRIM29-221ENST00000627238 GIGYF2Q6Y7W6 1299 aaKnown RBP21.78■■□□□ 1.08
TRIM29-221ENST00000627238 LRP10Q7Z4F1 713 aa21.78■■□□□ 1.08
TRIM29-221ENST00000627238 PNMA8AQ86V59 439 aaPredicted RBP21.78■■□□□ 1.08
TRIM29-221ENST00000627238 NUTM1Q86Y26 1132 aa21.78■■□□□ 1.08
TRIM29-221ENST00000627238 TNS4Q8IZW8 715 aa21.78■■□□□ 1.08
TRIM29-221ENST00000627238 BABAM1Q9NWV8 329 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms