RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 ZNF219Q9P2Y4 722 aaPredicted RBP17.96■□□□□ 0.47
SOX2-OT-241ENST00000626948 C21orf2O43822 256 aa17.95■□□□□ 0.46
SOX2-OT-241ENST00000626948 LMNB1P20700 586 aa17.95■□□□□ 0.46
SOX2-OT-241ENST00000626948 PDE6BP35913 854 aa17.95■□□□□ 0.46
SOX2-OT-241ENST00000626948 DICER1Q9UPY3 1922 aaKnown RBP17.94■□□□□ 0.46
SOX2-OT-241ENST00000626948 NUP98P52948 1817 aa17.94■□□□□ 0.46
SOX2-OT-241ENST00000626948 DDX10Q13206 875 aaKnown RBP17.94■□□□□ 0.46
SOX2-OT-241ENST00000626948 KLRG2A4D1S0 409 aaPredicted RBP17.93■□□□□ 0.46
SOX2-OT-241ENST00000626948 POTECB2RU33 542 aa17.93■□□□□ 0.46
SOX2-OT-241ENST00000626948 TTLL7Q6ZT98 887 aa17.93■□□□□ 0.46
SOX2-OT-241ENST00000626948 DNAJC5GQ8N7S2 189 aa17.93■□□□□ 0.46
SOX2-OT-241ENST00000626948 C7orf43Q8WVR3 580 aa17.93■□□□□ 0.46
SOX2-OT-241ENST00000626948 HTRA3P83110 453 aa17.92■□□□□ 0.46
SOX2-OT-241ENST00000626948 STYK1Q6J9G0 422 aa17.92■□□□□ 0.46
SOX2-OT-241ENST00000626948 PRPF40BQ6NWY9 871 aaKnown RBP17.92■□□□□ 0.46
SOX2-OT-241ENST00000626948 LRP10Q7Z4F1 713 aa17.92■□□□□ 0.46
SOX2-OT-241ENST00000626948 RBM46Q8TBY0 533 aaKnown RBP17.92■□□□□ 0.46
SOX2-OT-241ENST00000626948 NIP7Q9Y221 180 aaKnown RBP eCLIP17.92■□□□□ 0.46
SOX2-OT-241ENST00000626948 GLTPD2A6NH11 291 aa17.91■□□□□ 0.46
SOX2-OT-241ENST00000626948 RGL2O15211 777 aa17.91■□□□□ 0.46
SOX2-OT-241ENST00000626948 RALBP1Q15311 655 aa17.91■□□□□ 0.46
SOX2-OT-241ENST00000626948 OLFM4Q6UX06 510 aa17.91■□□□□ 0.46
SOX2-OT-241ENST00000626948 NPM2Q86SE8 214 aaKnown RBP17.91■□□□□ 0.46
SOX2-OT-241ENST00000626948 NBPF5PQ86XG9 351 aaPredicted RBP17.91■□□□□ 0.46
SOX2-OT-241ENST00000626948 NGEFQ8N5V2 710 aa17.91■□□□□ 0.46
SOX2-OT-241ENST00000626948 PDZRN3Q9UPQ7 1066 aa17.91■□□□□ 0.46
SOX2-OT-241ENST00000626948 WDR90Q96KV7 1748 aa17.91■□□□□ 0.46
SOX2-OT-241ENST00000626948 KDM2BQ8NHM5 1336 aa17.91■□□□□ 0.46
SOX2-OT-241ENST00000626948 ZC3H4Q9UPT8 1303 aaKnown RBP17.91■□□□□ 0.46
SOX2-OT-241ENST00000626948 FAM177BA6PVY3 158 aa17.9■□□□□ 0.46
SOX2-OT-241ENST00000626948 ST5P78524 1137 aa17.9■□□□□ 0.46
SOX2-OT-241ENST00000626948 PDIA6Q15084 440 aa17.9■□□□□ 0.46
SOX2-OT-241ENST00000626948 PNISRQ8TF01 805 aaKnown RBP17.9■□□□□ 0.46
SOX2-OT-241ENST00000626948 MASTLQ96GX5 879 aa17.9■□□□□ 0.46
SOX2-OT-241ENST00000626948 PCNTO95613 3336 aa17.9■□□□□ 0.46
SOX2-OT-241ENST00000626948 ABCC12Q96J65 1359 aa17.9■□□□□ 0.46
SOX2-OT-241ENST00000626948 TMPOP42166 694 aaKnown RBP17.89■□□□□ 0.45
SOX2-OT-241ENST00000626948 SLC51AQ86UW1 340 aa17.89■□□□□ 0.45
SOX2-OT-241ENST00000626948 RRP7AQ9Y3A4 280 aaKnown RBP17.89■□□□□ 0.45
SOX2-OT-241ENST00000626948 UBN2Q6ZU65 1347 aa17.89■□□□□ 0.45
SOX2-OT-241ENST00000626948 LTBP3Q9NS15 1303 aa17.89■□□□□ 0.45
SOX2-OT-241ENST00000626948 MYL6BP14649 208 aa17.88■□□□□ 0.45
SOX2-OT-241ENST00000626948 RIPK4P57078 832 aa17.88■□□□□ 0.45
SOX2-OT-241ENST00000626948 CNKSR1Q969H4 720 aa17.88■□□□□ 0.45
SOX2-OT-241ENST00000626948 ZNF652Q9Y2D9 606 aa17.88■□□□□ 0.45
SOX2-OT-241ENST00000626948 MAP3K15Q6ZN16 1313 aa17.88■□□□□ 0.45
SOX2-OT-241ENST00000626948 MAPK8IP3Q9UPT6 1336 aa17.88■□□□□ 0.45
SOX2-OT-241ENST00000626948 SNED1Q8TER0 1413 aa17.88■□□□□ 0.45
SOX2-OT-241ENST00000626948 NEFMP07197 916 aa17.87■□□□□ 0.45
SOX2-OT-241ENST00000626948 APLP1P51693 650 aa17.87■□□□□ 0.45
SOX2-OT-241ENST00000626948 PROSER3Q2NL68 480 aa17.87■□□□□ 0.45
SOX2-OT-241ENST00000626948 NUTM1Q86Y26 1132 aa17.87■□□□□ 0.45
SOX2-OT-241ENST00000626948 CCDC146Q8IYE0 955 aa17.87■□□□□ 0.45
SOX2-OT-241ENST00000626948 ERVV-1B6SEH8 477 aa17.86■□□□□ 0.45
SOX2-OT-241ENST00000626948 TPTE2Q6XPS3 522 aa17.86■□□□□ 0.45
SOX2-OT-241ENST00000626948 MYBBP1AQ9BQG0 1328 aaKnown RBP17.86■□□□□ 0.45
SOX2-OT-241ENST00000626948 NPHP1O15259 732 aa17.85■□□□□ 0.45
SOX2-OT-241ENST00000626948 ANXA1P04083 346 aa17.85■□□□□ 0.45
SOX2-OT-241ENST00000626948 NPR1P16066 1061 aa17.85■□□□□ 0.45
SOX2-OT-241ENST00000626948 FSTL1Q12841 308 aa17.85■□□□□ 0.45
SOX2-OT-241ENST00000626948 KRT24Q2M2I5 525 aa17.85■□□□□ 0.45
SOX2-OT-241ENST00000626948 ERFEQ4G0M1 354 aa17.85■□□□□ 0.45
SOX2-OT-241ENST00000626948 TAOK3Q9H2K8 898 aa17.85■□□□□ 0.45
SOX2-OT-241ENST00000626948 ZBTB3Q9H5J0 574 aa17.85■□□□□ 0.45
SOX2-OT-241ENST00000626948 TSPYL4Q9UJ04 414 aa17.85■□□□□ 0.45
SOX2-OT-241ENST00000626948 TRIM35Q9UPQ4 493 aa17.85■□□□□ 0.45
SOX2-OT-241ENST00000626948 GPTP24298 496 aa17.84■□□□□ 0.45
SOX2-OT-241ENST00000626948 CRY2Q49AN0 593 aa17.84■□□□□ 0.45
SOX2-OT-241ENST00000626948 SUSD4Q5VX71 490 aa17.84■□□□□ 0.45
SOX2-OT-241ENST00000626948 C3orf67Q6ZVT6 689 aa17.84■□□□□ 0.45
SOX2-OT-241ENST00000626948 ZNF34Q8IZ26 560 aa17.84■□□□□ 0.45
SOX2-OT-241ENST00000626948 PNNQ9H307 717 aaKnown RBP17.84■□□□□ 0.45
SOX2-OT-241ENST00000626948 VEGFAP15692 232 aaPredicted RBP17.83■□□□□ 0.44
SOX2-OT-241ENST00000626948 C16orf71Q8IYS4 520 aaPredicted RBP17.83■□□□□ 0.44
SOX2-OT-241ENST00000626948 COL4A5P29400 1685 aa17.83■□□□□ 0.44
SOX2-OT-241ENST00000626948 DDNO94850 711 aaPredicted RBP17.82■□□□□ 0.44
SOX2-OT-241ENST00000626948 POTEIP0CG38 1075 aa17.82■□□□□ 0.44
SOX2-OT-241ENST00000626948 POTEJP0CG39 1038 aa17.82■□□□□ 0.44
SOX2-OT-241ENST00000626948 NTSR2O95665 410 aa17.81■□□□□ 0.44
SOX2-OT-241ENST00000626948 EIF2S2P20042 333 aaKnown RBP17.81■□□□□ 0.44
SOX2-OT-241ENST00000626948 NEUROD2Q15784 382 aa17.81■□□□□ 0.44
SOX2-OT-241ENST00000626948 GIGYF2Q6Y7W6 1299 aaKnown RBP17.81■□□□□ 0.44
SOX2-OT-241ENST00000626948 ADAMTS8Q9UP79 889 aa17.81■□□□□ 0.44
SOX2-OT-241ENST00000626948 RIC1Q4ADV7 1423 aa17.81■□□□□ 0.44
SOX2-OT-241ENST00000626948 ERBB4Q15303 1308 aa17.8■□□□□ 0.44
SOX2-OT-241ENST00000626948 CHL1O00533 1208 aa17.8■□□□□ 0.44
SOX2-OT-241ENST00000626948 CCDC93Q567U6 631 aa17.8■□□□□ 0.44
SOX2-OT-241ENST00000626948 SMC1BQ8NDV3 1235 aa17.8■□□□□ 0.44
SOX2-OT-241ENST00000626948 ZNF277Q9NRM2 450 aaPredicted RBP17.8■□□□□ 0.44
SOX2-OT-241ENST00000626948 IBTKQ9P2D0 1353 aaPredicted RBP17.79■□□□□ 0.44
SOX2-OT-241ENST00000626948 FKBP4Q02790 459 aaKnown RBP eCLIP17.79■□□□□ 0.44
SOX2-OT-241ENST00000626948 KIF6Q6ZMV9 814 aa17.79■□□□□ 0.44
SOX2-OT-241ENST00000626948 NECTIN2Q92692 538 aa17.79■□□□□ 0.44
SOX2-OT-241ENST00000626948 PRKRIP1Q9H875 184 aaPredicted RBP17.79■□□□□ 0.44
SOX2-OT-241ENST00000626948 BABAM1Q9NWV8 329 aa17.79■□□□□ 0.44
SOX2-OT-241ENST00000626948 ANKRD36CQ5JPF3 1778 aa17.79■□□□□ 0.44
SOX2-OT-241ENST00000626948 ZNF541Q9H0D2 1346 aa17.78■□□□□ 0.44
SOX2-OT-241ENST00000626948 SOGA3Q5TF21 947 aa17.78■□□□□ 0.44
SOX2-OT-241ENST00000626948 DPY19L2Q6NUT2 758 aa17.78■□□□□ 0.44
SOX2-OT-241ENST00000626948 RUNDC1Q96C34 613 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms