RNA–Protein interactions for RNA: ENST00000626619.2

SOX2-OT-239, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 660 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-239ENST00000626619 BRCA1P38398 1863 aaKnown RBP18.09■□□□□ 0.49
SOX2-OT-239ENST00000626619 LAMB4A4D0S4 1761 aa18.08■□□□□ 0.48
SOX2-OT-239ENST00000626619 APAF1O14727 1248 aa18.07■□□□□ 0.48
SOX2-OT-239ENST00000626619 EIF2S2P20042 333 aaKnown RBP18.07■□□□□ 0.48
SOX2-OT-239ENST00000626619 PRELPP51888 382 aa18.07■□□□□ 0.48
SOX2-OT-239ENST00000626619 LMOD3Q0VAK6 560 aa18.07■□□□□ 0.48
SOX2-OT-239ENST00000626619 PDIA6Q15084 440 aa18.07■□□□□ 0.48
SOX2-OT-239ENST00000626619 LRP10Q7Z4F1 713 aa18.07■□□□□ 0.48
SOX2-OT-239ENST00000626619 CNBD1Q8NA66 436 aa18.07■□□□□ 0.48
SOX2-OT-239ENST00000626619 CHL1O00533 1208 aa18.06■□□□□ 0.48
SOX2-OT-239ENST00000626619 ZBTB3Q9H5J0 574 aa18.06■□□□□ 0.48
SOX2-OT-239ENST00000626619 ZNF219Q9P2Y4 722 aaPredicted RBP18.06■□□□□ 0.48
SOX2-OT-239ENST00000626619 NIP7Q9Y221 180 aaKnown RBP eCLIP18.06■□□□□ 0.48
SOX2-OT-239ENST00000626619 ANKRD31Q8N7Z5 1873 aa18.05■□□□□ 0.48
SOX2-OT-239ENST00000626619 C9orf131Q5VYM1 1079 aa18.05■□□□□ 0.48
SOX2-OT-239ENST00000626619 NBPF5PQ86XG9 351 aaPredicted RBP18.05■□□□□ 0.48
SOX2-OT-239ENST00000626619 BRIP1Q9BX63 1249 aa18.05■□□□□ 0.48
SOX2-OT-239ENST00000626619 COL11A2P13942 1736 aaPredicted RBP18.05■□□□□ 0.48
SOX2-OT-239ENST00000626619 H0YIN7 160 aa18.04■□□□□ 0.48
SOX2-OT-239ENST00000626619 CLEC4GQ6UXB4 293 aa18.04■□□□□ 0.48
SOX2-OT-239ENST00000626619 ZNF622Q969S3 477 aaKnown RBP eCLIP18.04■□□□□ 0.48
SOX2-OT-239ENST00000626619 ABCC12Q96J65 1359 aa18.04■□□□□ 0.48
SOX2-OT-239ENST00000626619 MAP3K15Q6ZN16 1313 aa18.03■□□□□ 0.48
SOX2-OT-239ENST00000626619 UBN2Q6ZU65 1347 aa18.03■□□□□ 0.48
SOX2-OT-239ENST00000626619 NPHP1O15259 732 aa18.03■□□□□ 0.48
SOX2-OT-239ENST00000626619 GPTP24298 496 aa18.03■□□□□ 0.48
SOX2-OT-239ENST00000626619 TTLL6Q8N841 843 aa18.03■□□□□ 0.48
SOX2-OT-239ENST00000626619 C1QTNF8P60827 252 aa18.02■□□□□ 0.48
SOX2-OT-239ENST00000626619 SLC51AQ86UW1 340 aa18.02■□□□□ 0.48
SOX2-OT-239ENST00000626619 NUTM1Q86Y26 1132 aa18.02■□□□□ 0.48
SOX2-OT-239ENST00000626619 ZNF428Q96B54 188 aa18.02■□□□□ 0.48
SOX2-OT-239ENST00000626619 GPBP1L1Q9HC44 474 aaPredicted RBP18.02■□□□□ 0.48
SOX2-OT-239ENST00000626619 ZNF652Q9Y2D9 606 aa18.02■□□□□ 0.48
SOX2-OT-239ENST00000626619 NFKBIEO00221 500 aa18.01■□□□□ 0.47
SOX2-OT-239ENST00000626619 PDE6BP35913 854 aa18.01■□□□□ 0.47
SOX2-OT-239ENST00000626619 ST5P78524 1137 aa18.01■□□□□ 0.47
SOX2-OT-239ENST00000626619 MBIPQ9NS73 344 aa18.01■□□□□ 0.47
SOX2-OT-239ENST00000626619 RNF181Q9P0P0 153 aa18.01■□□□□ 0.47
SOX2-OT-239ENST00000626619 C21orf2O43822 256 aa18■□□□□ 0.47
SOX2-OT-239ENST00000626619 SRGNP10124 158 aa18■□□□□ 0.47
SOX2-OT-239ENST00000626619 KIF6Q6ZMV9 814 aa18■□□□□ 0.47
SOX2-OT-239ENST00000626619 BABAM1Q9NWV8 329 aa18■□□□□ 0.47
SOX2-OT-239ENST00000626619 DLEC1Q9Y238 1755 aa17.99■□□□□ 0.47
SOX2-OT-239ENST00000626619 ERVV-1B6SEH8 477 aa17.99■□□□□ 0.47
SOX2-OT-239ENST00000626619 AIMP1Q12904 312 aaKnown RBP17.99■□□□□ 0.47
SOX2-OT-239ENST00000626619 OLFM4Q6UX06 510 aa17.99■□□□□ 0.47
SOX2-OT-239ENST00000626619 XAGE3Q8WTP9 111 aa17.99■□□□□ 0.47
SOX2-OT-239ENST00000626619 NMRK2Q9NPI5 230 aa17.99■□□□□ 0.47
SOX2-OT-239ENST00000626619 ARFGEF1Q9Y6D6 1849 aa17.99■□□□□ 0.47
SOX2-OT-239ENST00000626619 KIF3CO14782 793 aa17.98■□□□□ 0.47
SOX2-OT-239ENST00000626619 ZNF853P0CG23 659 aa17.98■□□□□ 0.47
SOX2-OT-239ENST00000626619 ERFEQ4G0M1 354 aa17.98■□□□□ 0.47
SOX2-OT-239ENST00000626619 SUSD4Q5VX71 490 aa17.98■□□□□ 0.47
SOX2-OT-239ENST00000626619 PRPF40BQ6NWY9 871 aaKnown RBP17.98■□□□□ 0.47
SOX2-OT-239ENST00000626619 CHPF2Q9P2E5 772 aa17.98■□□□□ 0.47
SOX2-OT-239ENST00000626619 TNRC6CQ9HCJ0 1690 aaKnown RBP17.98■□□□□ 0.47
SOX2-OT-239ENST00000626619 ERBB4Q15303 1308 aa17.98■□□□□ 0.47
SOX2-OT-239ENST00000626619 C3orf67Q6ZVT6 689 aa17.97■□□□□ 0.47
SOX2-OT-239ENST00000626619 COPS6Q7L5N1 327 aa17.97■□□□□ 0.47
SOX2-OT-239ENST00000626619 ZNF34Q8IZ26 560 aa17.97■□□□□ 0.47
SOX2-OT-239ENST00000626619 CFAP44Q96MT7 982 aa17.97■□□□□ 0.47
SOX2-OT-239ENST00000626619 MRS2Q9HD23 443 aa17.97■□□□□ 0.47
SOX2-OT-239ENST00000626619 RGL2O15211 777 aa17.96■□□□□ 0.47
SOX2-OT-239ENST00000626619 HDGFL1Q5TGJ6 251 aa17.96■□□□□ 0.47
SOX2-OT-239ENST00000626619 DUSP27Q5VZP5 1158 aa17.96■□□□□ 0.47
SOX2-OT-239ENST00000626619 STYK1Q6J9G0 422 aa17.96■□□□□ 0.47
SOX2-OT-239ENST00000626619 TPTE2Q6XPS3 522 aa17.96■□□□□ 0.47
SOX2-OT-239ENST00000626619 GIGYF2Q6Y7W6 1299 aaKnown RBP17.96■□□□□ 0.47
SOX2-OT-239ENST00000626619 KLRG2A4D1S0 409 aaPredicted RBP17.95■□□□□ 0.46
SOX2-OT-239ENST00000626619 ELL2O00472 640 aaPredicted RBP17.95■□□□□ 0.46
SOX2-OT-239ENST00000626619 NTSR2O95665 410 aa17.95■□□□□ 0.46
SOX2-OT-239ENST00000626619 ANP32CO43423 234 aa17.94■□□□□ 0.46
SOX2-OT-239ENST00000626619 SYNE4Q8N205 404 aa17.94■□□□□ 0.46
SOX2-OT-239ENST00000626619 MASTLQ96GX5 879 aa17.94■□□□□ 0.46
SOX2-OT-239ENST00000626619 GTF2E1P29083 439 aaPredicted RBP17.93■□□□□ 0.46
SOX2-OT-239ENST00000626619 C8orf58Q8NAV2 365 aa17.93■□□□□ 0.46
SOX2-OT-239ENST00000626619 C7orf43Q8WVR3 580 aa17.93■□□□□ 0.46
SOX2-OT-239ENST00000626619 TSR2Q969E8 191 aaKnown RBP17.93■□□□□ 0.46
SOX2-OT-239ENST00000626619 DDX21Q9NR30 783 aaKnown RBP eCLIP17.93■□□□□ 0.46
SOX2-OT-239ENST00000626619 NPR1P16066 1061 aa17.92■□□□□ 0.46
SOX2-OT-239ENST00000626619 CNKSR1Q969H4 720 aa17.92■□□□□ 0.46
SOX2-OT-239ENST00000626619 IFT57Q9NWB7 429 aa17.92■□□□□ 0.46
SOX2-OT-239ENST00000626619 SLX4Q8IY92 1834 aa17.92■□□□□ 0.46
SOX2-OT-239ENST00000626619 LMNB1P20700 586 aa17.91■□□□□ 0.46
SOX2-OT-239ENST00000626619 TSPYL6Q8N831 410 aa17.91■□□□□ 0.46
SOX2-OT-239ENST00000626619 PDZRN3Q9UPQ7 1066 aa17.91■□□□□ 0.46
SOX2-OT-239ENST00000626619 SALL2Q9Y467 1007 aaPredicted RBP17.91■□□□□ 0.46
SOX2-OT-239ENST00000626619 CRY2Q49AN0 593 aa17.9■□□□□ 0.46
SOX2-OT-239ENST00000626619 IBTKQ9P2D0 1353 aaPredicted RBP17.9■□□□□ 0.46
SOX2-OT-239ENST00000626619 TCERG1O14776 1098 aaKnown RBP17.89■□□□□ 0.45
SOX2-OT-239ENST00000626619 GNAI1P63096 354 aa17.89■□□□□ 0.45
SOX2-OT-239ENST00000626619 NLRP10Q86W26 655 aa17.89■□□□□ 0.45
SOX2-OT-239ENST00000626619 NYXQ9GZU5 481 aa17.89■□□□□ 0.45
SOX2-OT-239ENST00000626619 PHAXQ9H814 394 aaKnown RBP17.89■□□□□ 0.45
SOX2-OT-239ENST00000626619 NUP98P52948 1817 aa17.88■□□□□ 0.45
SOX2-OT-239ENST00000626619 HOXB7P09629 217 aa17.88■□□□□ 0.45
SOX2-OT-239ENST00000626619 HCLS1P14317 486 aaPredicted RBP17.88■□□□□ 0.45
SOX2-OT-239ENST00000626619 WWC1Q8IX03 1113 aa17.88■□□□□ 0.45
SOX2-OT-239ENST00000626619 TAOK3Q9H2K8 898 aa17.88■□□□□ 0.45
SOX2-OT-239ENST00000626619 CEP350Q5VT06 3117 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms