RNA–Protein interactions for RNA: ENST00000625990.2

CHD2-206, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-206ENST00000625990 ZNF790Q6PG37 636 aa11.89□□□□□ -0.51
CHD2-206ENST00000625990 TTC5Q8N0Z6 440 aa11.89□□□□□ -0.51
CHD2-206ENST00000625990 TBC1D2BQ9UPU7 963 aa11.89□□□□□ -0.51
CHD2-206ENST00000625990 SENP3-EIF4A1A0A087X0R7 540 aa11.88□□□□□ -0.51
CHD2-206ENST00000625990 PSEN1P49768 467 aa11.88□□□□□ -0.51
CHD2-206ENST00000625990 C1QTNF8P60827 252 aa11.88□□□□□ -0.51
CHD2-206ENST00000625990 GAS2L2Q8NHY3 880 aa11.88□□□□□ -0.51
CHD2-206ENST00000625990 BBXQ8WY36 941 aaPredicted RBP11.88□□□□□ -0.51
CHD2-206ENST00000625990 CFAP53Q96M91 514 aa11.88□□□□□ -0.51
CHD2-206ENST00000625990 ADCY9O60503 1353 aa11.88□□□□□ -0.51
CHD2-206ENST00000625990 CEMIPQ8WUJ3 1361 aa11.88□□□□□ -0.51
CHD2-206ENST00000625990 HEG1Q9ULI3 1381 aa11.88□□□□□ -0.51
CHD2-206ENST00000625990 BTBD11A6QL63 1104 aa11.87□□□□□ -0.51
CHD2-206ENST00000625990 ZPR1O75312 459 aa11.87□□□□□ -0.51
CHD2-206ENST00000625990 GIGYF1O75420 1035 aaPredicted RBP11.87□□□□□ -0.51
CHD2-206ENST00000625990 FCHSD2O94868 740 aa11.87□□□□□ -0.51
CHD2-206ENST00000625990 TM4SF1P30408 202 aa11.87□□□□□ -0.51
CHD2-206ENST00000625990 CLCN6P51797 869 aa11.87□□□□□ -0.51
CHD2-206ENST00000625990 ARHGAP27Q6ZUM4 889 aa11.87□□□□□ -0.51
CHD2-206ENST00000625990 USP16Q9Y5T5 823 aa11.87□□□□□ -0.51
CHD2-206ENST00000625990 GALR2O43603 387 aaPredicted RBP11.86□□□□□ -0.51
CHD2-206ENST00000625990 DDX10Q13206 875 aaKnown RBP11.86□□□□□ -0.51
CHD2-206ENST00000625990 TBC1D9BQ66K14 1250 aa11.86□□□□□ -0.51
CHD2-206ENST00000625990 NARFQ9UHQ1 456 aa11.86□□□□□ -0.51
CHD2-206ENST00000625990 STK24Q9Y6E0 443 aa11.86□□□□□ -0.51
CHD2-206ENST00000625990 BRCA1P38398 1863 aaKnown RBP11.86□□□□□ -0.51
CHD2-206ENST00000625990 CEP350Q5VT06 3117 aa11.86□□□□□ -0.51
CHD2-206ENST00000625990 AFDNP55196 1824 aaKnown RBP11.86□□□□□ -0.51
CHD2-206ENST00000625990 RASSF7Q02833 373 aa11.85□□□□□ -0.51
CHD2-206ENST00000625990 TRPC6Q9Y210 931 aa11.85□□□□□ -0.51
CHD2-206ENST00000625990 SERPINB2P05120 415 aa11.84□□□□□ -0.51
CHD2-206ENST00000625990 PRELPP51888 382 aa11.84□□□□□ -0.51
CHD2-206ENST00000625990 EIF5P55010 431 aaKnown RBP11.84□□□□□ -0.51
CHD2-206ENST00000625990 TGFB2P61812 414 aa11.84□□□□□ -0.51
CHD2-206ENST00000625990 NUDCQ9Y266 331 aa11.84□□□□□ -0.51
CHD2-206ENST00000625990 HMGB2P26583 209 aaKnown RBP11.83□□□□□ -0.52
CHD2-206ENST00000625990 VSIG10Q8N0Z9 540 aa11.83□□□□□ -0.52
CHD2-206ENST00000625990 FMNL2Q96PY5 1086 aa11.83□□□□□ -0.52
CHD2-206ENST00000625990 GPBP1L1Q9HC44 474 aaPredicted RBP11.83□□□□□ -0.52
CHD2-206ENST00000625990 SCN7AQ01118 1682 aa11.83□□□□□ -0.52
CHD2-206ENST00000625990 FAM177BA6PVY3 158 aa11.82□□□□□ -0.52
CHD2-206ENST00000625990 NBPF26B4DH59 902 aa11.82□□□□□ -0.52
CHD2-206ENST00000625990 CAMTA2O94983 1202 aa11.82□□□□□ -0.52
CHD2-206ENST00000625990 STARD3NLO95772 234 aa11.82□□□□□ -0.52
CHD2-206ENST00000625990 C9orf131Q5VYM1 1079 aa11.82□□□□□ -0.52
CHD2-206ENST00000625990 NBPF10Q6P3W6 841 aaKnown RBP11.82□□□□□ -0.52
CHD2-206ENST00000625990 SLC51AQ86UW1 340 aa11.82□□□□□ -0.52
CHD2-206ENST00000625990 CCDC146Q8IYE0 955 aa11.82□□□□□ -0.52
CHD2-206ENST00000625990 NGEFQ8N5V2 710 aa11.82□□□□□ -0.52
CHD2-206ENST00000625990 NBPF15Q8N660 670 aa11.82□□□□□ -0.52
CHD2-206ENST00000625990 PLEKHF1Q96S99 279 aa11.82□□□□□ -0.52
CHD2-206ENST00000625990 RRP7AQ9Y3A4 280 aaKnown RBP11.82□□□□□ -0.52
CHD2-206ENST00000625990 COL11A2P13942 1736 aaPredicted RBP11.82□□□□□ -0.52
CHD2-206ENST00000625990 DLG5Q8TDM6 1919 aa11.82□□□□□ -0.52
CHD2-206ENST00000625990 ANKRD31Q8N7Z5 1873 aa11.81□□□□□ -0.52
CHD2-206ENST00000625990 NRXN2Q9P2S2 1712 aa11.81□□□□□ -0.52
CHD2-206ENST00000625990 RTF1Q92541 710 aaKnown RBP11.81□□□□□ -0.52
CHD2-206ENST00000625990 ZNF428Q96B54 188 aa11.81□□□□□ -0.52
CHD2-206ENST00000625990 NMRK2Q9NPI5 230 aa11.81□□□□□ -0.52
CHD2-206ENST00000625990 PIM2Q9P1W9 311 aa11.81□□□□□ -0.52
CHD2-206ENST00000625990 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.81□□□□□ -0.52
CHD2-206ENST00000625990 KIF3CO14782 793 aa11.8□□□□□ -0.52
CHD2-206ENST00000625990 DALRD3Q5D0E6 543 aaKnown RBP11.8□□□□□ -0.52
CHD2-206ENST00000625990 PRR5LQ6MZQ0 368 aa11.8□□□□□ -0.52
CHD2-206ENST00000625990 C2CD5Q86YS7 1000 aa11.8□□□□□ -0.52
CHD2-206ENST00000625990 PLCB2Q00722 1185 aa11.79□□□□□ -0.52
CHD2-206ENST00000625990 DZIP3Q86Y13 1208 aaKnown RBP11.79□□□□□ -0.52
CHD2-206ENST00000625990 BCORQ6W2J9 1755 aa11.79□□□□□ -0.52
CHD2-206ENST00000625990 GABBR2O75899 941 aa11.78□□□□□ -0.52
CHD2-206ENST00000625990 TIE1P35590 1138 aa11.78□□□□□ -0.52
CHD2-206ENST00000625990 IL6STP40189 918 aaPredicted RBP11.78□□□□□ -0.52
CHD2-206ENST00000625990 NFE2L2Q16236 605 aa11.78□□□□□ -0.52
CHD2-206ENST00000625990 HLFQ16534 295 aa11.78□□□□□ -0.52
CHD2-206ENST00000625990 OLFM4Q6UX06 510 aa11.78□□□□□ -0.52
CHD2-206ENST00000625990 RNF181Q9P0P0 153 aa11.78□□□□□ -0.52
CHD2-206ENST00000625990 ARFGEF1Q9Y6D6 1849 aa11.78□□□□□ -0.52
CHD2-206ENST00000625990 ANXA1P04083 346 aa11.77□□□□□ -0.53
CHD2-206ENST00000625990 HTRA3P83110 453 aa11.77□□□□□ -0.53
CHD2-206ENST00000625990 TAF7Q15545 349 aaPredicted RBP11.77□□□□□ -0.53
CHD2-206ENST00000625990 NEUROD2Q15784 382 aa11.77□□□□□ -0.53
CHD2-206ENST00000625990 NECTIN2Q92692 538 aa11.77□□□□□ -0.53
CHD2-206ENST00000625990 ZNF622Q969S3 477 aaKnown RBP eCLIP11.77□□□□□ -0.536e-7■■□□□ 11.4
CHD2-206ENST00000625990 TMEM106CQ9BVX2 250 aa11.77□□□□□ -0.53
CHD2-206ENST00000625990 KDM3BQ7LBC6 1761 aa11.77□□□□□ -0.53
CHD2-206ENST00000625990 SNRPA1P09661 255 aaKnown RBP11.76□□□□□ -0.53
CHD2-206ENST00000625990 MYL6BP14649 208 aa11.76□□□□□ -0.53
CHD2-206ENST00000625990 KRT24Q2M2I5 525 aa11.76□□□□□ -0.53
CHD2-206ENST00000625990 TTLL7Q6ZT98 887 aa11.76□□□□□ -0.53
CHD2-206ENST00000625990 DLEC1Q9Y238 1755 aa11.76□□□□□ -0.53
CHD2-206ENST00000625990 CACNA1SQ13698 1873 aa11.75□□□□□ -0.53
CHD2-206ENST00000625990 A0A087WZG4 1122 aa11.75□□□□□ -0.53
CHD2-206ENST00000625990 NFKBIEO00221 500 aa11.75□□□□□ -0.53
CHD2-206ENST00000625990 C21orf2O43822 256 aa11.75□□□□□ -0.53
CHD2-206ENST00000625990 EIF4A1P60842 406 aaKnown RBP11.75□□□□□ -0.53
CHD2-206ENST00000625990 PROSER3Q2NL68 480 aa11.75□□□□□ -0.53
CHD2-206ENST00000625990 BMP2KQ9NSY1 1161 aaPredicted RBP11.75□□□□□ -0.53
CHD2-206ENST00000625990 TNRC6CQ9HCJ0 1690 aaKnown RBP11.75□□□□□ -0.53
CHD2-206ENST00000625990 TTLL13PA6NNM8 815 aa11.74□□□□□ -0.53
CHD2-206ENST00000625990 H0YIN7 160 aa11.74□□□□□ -0.53
CHD2-206ENST00000625990 NPHP1O15259 732 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms