RNA–Protein interactions for RNA: ENST00000625943.1

SNORD38B-202, Transcript of small nucleolar RNA, C/D box 38B, humanhuman

BASIC

Gene SNORD38B, Length 69 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD38B-202ENST00000625943 MAFBQ9Y5Q3 323 aaPredicted RBP2.55□□□□□ -2
SNORD38B-202ENST00000625943 GPC6Q9Y625 555 aaPredicted RBP2.55□□□□□ -2
SNORD38B-202ENST00000625943 ATAD2Q6PL18 1390 aa2.54□□□□□ -2
SNORD38B-202ENST00000625943 SERTM1A2A2V5 107 aa2.54□□□□□ -2
SNORD38B-202ENST00000625943 DCDC2BA2VCK2 349 aa2.54□□□□□ -2
SNORD38B-202ENST00000625943 SFI1A8K8P3 1242 aa2.54□□□□□ -2
SNORD38B-202ENST00000625943 NEURL1BA8MQ27 555 aa2.54□□□□□ -2
SNORD38B-202ENST00000625943 KHNYNO15037 678 aaKnown RBP2.54□□□□□ -2
SNORD38B-202ENST00000625943 PROCP04070 461 aa2.54□□□□□ -2
SNORD38B-202ENST00000625943 DGKGP49619 791 aa2.54□□□□□ -2
SNORD38B-202ENST00000625943 KCNQ4P56696 695 aa2.54□□□□□ -2
SNORD38B-202ENST00000625943 PSMA6P60900 246 aaKnown RBP2.54□□□□□ -2
SNORD38B-202ENST00000625943 SFSWAPQ12872 951 aaKnown RBP2.54□□□□□ -2
SNORD38B-202ENST00000625943 PTK7Q13308 1070 aa2.54□□□□□ -2
SNORD38B-202ENST00000625943 COL9A3Q14050 684 aaPredicted RBP2.54□□□□□ -2
SNORD38B-202ENST00000625943 ZNF468Q5VIY5 522 aaPredicted RBP2.54□□□□□ -2
SNORD38B-202ENST00000625943 GPAT2Q6NUI2 795 aa2.54□□□□□ -2
SNORD38B-202ENST00000625943 LRRC69Q6ZNQ3 347 aa2.54□□□□□ -2
SNORD38B-202ENST00000625943 TSEN2Q8NCE0 465 aaKnown RBP2.54□□□□□ -2
SNORD38B-202ENST00000625943 ZNF280CQ8ND82 737 aa2.54□□□□□ -2
SNORD38B-202ENST00000625943 GAS2L2Q8NHY3 880 aa2.54□□□□□ -2
SNORD38B-202ENST00000625943 GLMNQ92990 594 aa2.54□□□□□ -2
SNORD38B-202ENST00000625943 C2orf49Q9BVC5 232 aaPredicted RBP2.54□□□□□ -2
SNORD38B-202ENST00000625943 PPP1R12CQ9BZL4 782 aa2.54□□□□□ -2
SNORD38B-202ENST00000625943 SUV39H2Q9H5I1 410 aa2.54□□□□□ -2
SNORD38B-202ENST00000625943 MKL2Q9ULH7 1088 aa2.54□□□□□ -2
SNORD38B-202ENST00000625943 HCN4Q9Y3Q4 1203 aa2.54□□□□□ -2
SNORD38B-202ENST00000625943 ADARB2-AS1A8MUL3 147 aa2.53□□□□□ -2
SNORD38B-202ENST00000625943 RASA1P20936 1047 aa2.53□□□□□ -2
SNORD38B-202ENST00000625943 ADH6P28332 368 aa2.53□□□□□ -2
SNORD38B-202ENST00000625943 SEC13P55735 322 aa2.53□□□□□ -2
SNORD38B-202ENST00000625943 PCBP4P57723 403 aaKnown RBP2.53□□□□□ -2
SNORD38B-202ENST00000625943 PSME1Q06323 249 aa2.53□□□□□ -2
SNORD38B-202ENST00000625943 BICDL1Q6ZP65 573 aa2.53□□□□□ -2
SNORD38B-202ENST00000625943 CHSY3Q70JA7 882 aa2.53□□□□□ -2
SNORD38B-202ENST00000625943 ILDR2Q71H61 639 aa2.53□□□□□ -2
SNORD38B-202ENST00000625943 PODNQ7Z5L7 613 aa2.53□□□□□ -2
SNORD38B-202ENST00000625943 ALYREFQ86V81 257 aaKnown RBP2.53□□□□□ -2
SNORD38B-202ENST00000625943 ARXQ96QS3 562 aa2.53□□□□□ -2
SNORD38B-202ENST00000625943 SLC30A3Q99726 388 aa2.53□□□□□ -2
SNORD38B-202ENST00000625943 SPOCK3Q9BQ16 436 aa2.53□□□□□ -2
SNORD38B-202ENST00000625943 PHACTR1Q9C0D0 580 aa2.53□□□□□ -2
SNORD38B-202ENST00000625943 DMGDHQ9UI17 866 aaKnown RBP2.53□□□□□ -2
SNORD38B-202ENST00000625943 STARD13Q9Y3M8 1113 aa2.53□□□□□ -2
SNORD38B-202ENST00000625943 ELOA3CA0A087WX78 387 aaPredicted RBP2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 ELOA3DA6NLF2 546 aaPredicted RBP2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 FAM196BA6NMK8 535 aa2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 MSTNO14793 375 aa2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 SIN3BO75182 1162 aa2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 SRPK2P78362 688 aaKnown RBP2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 DPYDQ12882 1025 aa2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 ELOA3BQ3SY89 546 aa2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 CRTC2Q53ET0 693 aaPredicted RBP2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 CFAP70Q5T0N1 1121 aa2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 SYT9Q86SS6 491 aa2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 ALDH16A1Q8IZ83 802 aa2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 ELOA3Q8NG57 546 aa2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 SCG3Q8WXD2 468 aaKnown RBP2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 TNFRSF25Q93038 417 aa2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 TRIM11Q96F44 468 aa2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 ZNF594Q96JF6 807 aaPredicted RBP2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 HSH2DQ96JZ2 352 aa2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 SUSD3Q96L08 255 aa2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 CALR3Q96L12 384 aaKnown RBP2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 ANKIB1Q9P2G1 1089 aa2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 ZNF232Q9UNY5 417 aa2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 BCS1LQ9Y276 419 aa2.52□□□□□ -2.01
SNORD38B-202ENST00000625943 C1QTNF9BB2RNN3 333 aa2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 GNB5O14775 395 aa2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 PPP1R12BO60237 982 aaPredicted RBP2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 ADAM23O75077 832 aa2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 IGFBP4P22692 258 aa2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 GRNP28799 593 aaKnown RBP2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 LMOD1P29536 600 aaPredicted RBP2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 WEE1P30291 646 aa2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 TYRO3Q06418 890 aa2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 LARP1Q6PKG0 1096 aaKnown RBP2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 C20orf204Q6ZNR8 217 aa2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 CD163Q86VB7 1156 aa2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 ANKMY2Q8IV38 441 aa2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 MICALL1Q8N3F8 863 aa2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 RHPN1Q8TCX5 695 aa2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 VRTNQ9H8Y1 702 aa2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 RRAGCQ9HB90 399 aa2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 NEUROD4Q9HD90 331 aa2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 PRDM6Q9NQX0 595 aa2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 ZNF777Q9ULD5 760 aaPredicted RBP2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 PRR12Q9ULL5 1215 aa2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 KCNH4Q9UQ05 1017 aa2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 GJA3Q9Y6H8 435 aa2.51□□□□□ -2.01
SNORD38B-202ENST00000625943 USP17L15C9J2P7 530 aa2.5□□□□□ -2.01
SNORD38B-202ENST00000625943 USP17L10C9JJH3 530 aa2.5□□□□□ -2.01
SNORD38B-202ENST00000625943 USP17L13C9JLJ4 530 aa2.5□□□□□ -2.01
SNORD38B-202ENST00000625943 USP17L12C9JPN9 530 aa2.5□□□□□ -2.01
SNORD38B-202ENST00000625943 USP17L11C9JVI0 530 aa2.5□□□□□ -2.01
SNORD38B-202ENST00000625943 USP17L21D6R901 530 aa2.5□□□□□ -2.01
SNORD38B-202ENST00000625943 USP17L18D6R9N7 530 aa2.5□□□□□ -2.01
SNORD38B-202ENST00000625943 USP17L22D6RA61 530 aa2.5□□□□□ -2.01
SNORD38B-202ENST00000625943 USP17L17D6RBQ6 530 aa2.5□□□□□ -2.01
SNORD38B-202ENST00000625943 USP17L19D6RCP7 530 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms