RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 NBPF26B4DH59 902 aa25.36■■□□□ 1.65
ATG4B-226ENST00000625810 NBPF10Q6P3W6 841 aaKnown RBP25.36■■□□□ 1.65
ATG4B-226ENST00000625810 NBPF15Q8N660 670 aa25.36■■□□□ 1.65
ATG4B-226ENST00000625810 ZNF652Q9Y2D9 606 aa25.36■■□□□ 1.65
ATG4B-226ENST00000625810 ST5P78524 1137 aa25.35■■□□□ 1.65
ATG4B-226ENST00000625810 DDX10Q13206 875 aaKnown RBP25.35■■□□□ 1.65
ATG4B-226ENST00000625810 CLEC4GQ6UXB4 293 aa25.35■■□□□ 1.65
ATG4B-226ENST00000625810 LAMB4A4D0S4 1761 aa25.33■■□□□ 1.65
ATG4B-226ENST00000625810 C21orf2O43822 256 aa25.33■■□□□ 1.65
ATG4B-226ENST00000625810 FSTL1Q12841 308 aa25.33■■□□□ 1.65
ATG4B-226ENST00000625810 THUMPD2Q9BTF0 503 aaKnown RBP25.33■■□□□ 1.65
ATG4B-226ENST00000625810 ZNF219Q9P2Y4 722 aaPredicted RBP25.33■■□□□ 1.65
ATG4B-226ENST00000625810 WDR90Q96KV7 1748 aa25.32■■□□□ 1.64
ATG4B-226ENST00000625810 KDM3BQ7LBC6 1761 aa25.32■■□□□ 1.64
ATG4B-226ENST00000625810 GLTPD2A6NH11 291 aa25.32■■□□□ 1.64
ATG4B-226ENST00000625810 STYK1Q6J9G0 422 aa25.32■■□□□ 1.64
ATG4B-226ENST00000625810 NBPF5PQ86XG9 351 aaPredicted RBP25.32■■□□□ 1.64
ATG4B-226ENST00000625810 DNAJC5GQ8N7S2 189 aa25.32■■□□□ 1.64
ATG4B-226ENST00000625810 FER1L6Q2WGJ9 1857 aa25.32■■□□□ 1.64
ATG4B-226ENST00000625810 CCDC88AQ3V6T2 1871 aa25.32■■□□□ 1.64
ATG4B-226ENST00000625810 SRGNP10124 158 aa25.31■■□□□ 1.64
ATG4B-226ENST00000625810 RGL2O15211 777 aa25.3■■□□□ 1.64
ATG4B-226ENST00000625810 CNKSR1Q969H4 720 aa25.3■■□□□ 1.64
ATG4B-226ENST00000625810 ARFGEF2Q9Y6D5 1785 aa25.3■■□□□ 1.64
ATG4B-226ENST00000625810 SLX4Q8IY92 1834 aa25.3■■□□□ 1.64
ATG4B-226ENST00000625810 EIF4A1P60842 406 aaKnown RBP25.29■■□□□ 1.64
ATG4B-226ENST00000625810 PRPF40BQ6NWY9 871 aaKnown RBP25.29■■□□□ 1.64
ATG4B-226ENST00000625810 NGEFQ8N5V2 710 aa25.29■■□□□ 1.64
ATG4B-226ENST00000625810 MASTLQ96GX5 879 aa25.29■■□□□ 1.64
ATG4B-226ENST00000625810 NIP7Q9Y221 180 aaKnown RBP eCLIP25.29■■□□□ 1.64
ATG4B-226ENST00000625810 CACNA1SQ13698 1873 aa25.28■■□□□ 1.64
ATG4B-226ENST00000625810 LTBP3Q9NS15 1303 aa25.28■■□□□ 1.64
ATG4B-226ENST00000625810 RIPK4P57078 832 aa25.27■■□□□ 1.64
ATG4B-226ENST00000625810 TPTE2Q6XPS3 522 aa25.27■■□□□ 1.64
ATG4B-226ENST00000625810 FAM177BA6PVY3 158 aa25.26■■□□□ 1.63
ATG4B-226ENST00000625810 VEGFAP15692 232 aaPredicted RBP25.26■■□□□ 1.63
ATG4B-226ENST00000625810 HTRA3P83110 453 aa25.26■■□□□ 1.63
ATG4B-226ENST00000625810 SMC1BQ8NDV3 1235 aa25.26■■□□□ 1.63
ATG4B-226ENST00000625810 TAOK3Q9H2K8 898 aa25.26■■□□□ 1.63
ATG4B-226ENST00000625810 RRP7AQ9Y3A4 280 aaKnown RBP25.26■■□□□ 1.63
ATG4B-226ENST00000625810 HLFQ16534 295 aa25.25■■□□□ 1.63
ATG4B-226ENST00000625810 MYBBP1AQ9BQG0 1328 aaKnown RBP25.25■■□□□ 1.63
ATG4B-226ENST00000625810 DICER1Q9UPY3 1922 aaKnown RBP25.25■■□□□ 1.63
ATG4B-226ENST00000625810 KLRG2A4D1S0 409 aaPredicted RBP25.24■■□□□ 1.63
ATG4B-226ENST00000625810 ERFEQ4G0M1 354 aa25.24■■□□□ 1.63
ATG4B-226ENST00000625810 TSPYL4Q9UJ04 414 aa25.24■■□□□ 1.63
ATG4B-226ENST00000625810 POTECB2RU33 542 aa25.23■■□□□ 1.63
ATG4B-226ENST00000625810 GTF2E1P29083 439 aaPredicted RBP25.23■■□□□ 1.63
ATG4B-226ENST00000625810 SOGA3Q5TF21 947 aa25.23■■□□□ 1.63
ATG4B-226ENST00000625810 MYL6BP14649 208 aa25.22■■□□□ 1.63
ATG4B-226ENST00000625810 NPR1P16066 1061 aa25.22■■□□□ 1.63
ATG4B-226ENST00000625810 LMOD3Q0VAK6 560 aa25.22■■□□□ 1.63
ATG4B-226ENST00000625810 IFFO2Q5TF58 517 aa25.22■■□□□ 1.63
ATG4B-226ENST00000625810 KIF6Q6ZMV9 814 aa25.22■■□□□ 1.63
ATG4B-226ENST00000625810 C7orf43Q8WVR3 580 aa25.22■■□□□ 1.63
ATG4B-226ENST00000625810 TMPOP42166 694 aaKnown RBP25.21■■□□□ 1.63
ATG4B-226ENST00000625810 ERVV-1B6SEH8 477 aa25.2■■□□□ 1.62
ATG4B-226ENST00000625810 DPY19L2Q6NUT2 758 aa25.2■■□□□ 1.62
ATG4B-226ENST00000625810 MAP3K15Q6ZN16 1313 aa25.19■■□□□ 1.62
ATG4B-226ENST00000625810 WDR43Q15061 677 aaKnown RBP eCLIP25.19■■□□□ 1.62
ATG4B-226ENST00000625810 NEUROD2Q15784 382 aa25.19■■□□□ 1.62
ATG4B-226ENST00000625810 TTLL7Q6ZT98 887 aa25.19■■□□□ 1.62
ATG4B-226ENST00000625810 CCDC146Q8IYE0 955 aa25.19■■□□□ 1.62
ATG4B-226ENST00000625810 KLRG1Q96E93 195 aa25.19■■□□□ 1.62
ATG4B-226ENST00000625810 CCDC93Q567U6 631 aa25.18■■□□□ 1.62
ATG4B-226ENST00000625810 ABCC12Q96J65 1359 aa25.18■■□□□ 1.62
ATG4B-226ENST00000625810 EIF2S2P20042 333 aaKnown RBP25.17■■□□□ 1.62
ATG4B-226ENST00000625810 NYXQ9GZU5 481 aa25.17■■□□□ 1.62
ATG4B-226ENST00000625810 BABAM1Q9NWV8 329 aa25.17■■□□□ 1.62
ATG4B-226ENST00000625810 NUP98P52948 1817 aa25.16■■□□□ 1.62
ATG4B-226ENST00000625810 ERBB4Q15303 1308 aa25.16■■□□□ 1.62
ATG4B-226ENST00000625810 ZBTB3Q9H5J0 574 aa25.16■■□□□ 1.62
ATG4B-226ENST00000625810 OLFM4Q6UX06 510 aa25.15■■□□□ 1.62
ATG4B-226ENST00000625810 DDNO94850 711 aaPredicted RBP25.14■■□□□ 1.62
ATG4B-226ENST00000625810 GPTP24298 496 aa25.14■■□□□ 1.62
ATG4B-226ENST00000625810 NUTM1Q86Y26 1132 aa25.14■■□□□ 1.62
ATG4B-226ENST00000625810 JMYQ8N9B5 988 aa25.14■■□□□ 1.62
ATG4B-226ENST00000625810 RUNDC1Q96C34 613 aa25.14■■□□□ 1.62
ATG4B-226ENST00000625810 ALDH1B1P30837 517 aa25.13■■□□□ 1.61
ATG4B-226ENST00000625810 FKBP4Q02790 459 aaKnown RBP eCLIP25.13■■□□□ 1.61
ATG4B-226ENST00000625810 CRY2Q49AN0 593 aa25.13■■□□□ 1.61
ATG4B-226ENST00000625810 IBTKQ9P2D0 1353 aaPredicted RBP25.13■■□□□ 1.61
ATG4B-226ENST00000625810 UBN2Q6ZU65 1347 aa25.12■■□□□ 1.61
ATG4B-226ENST00000625810 ZNF277Q9NRM2 450 aaPredicted RBP25.11■■□□□ 1.61
ATG4B-226ENST00000625810 LAS1LQ9Y4W2 734 aaKnown RBP25.11■■□□□ 1.61
ATG4B-226ENST00000625810 RIC1Q4ADV7 1423 aa25.11■■□□□ 1.61
ATG4B-226ENST00000625810 SNED1Q8TER0 1413 aa25.11■■□□□ 1.61
ATG4B-226ENST00000625810 GIGYF2Q6Y7W6 1299 aaKnown RBP25.1■■□□□ 1.61
ATG4B-226ENST00000625810 LRP10Q7Z4F1 713 aa25.1■■□□□ 1.61
ATG4B-226ENST00000625810 RTKN2Q8IZC4 609 aa25.1■■□□□ 1.61
ATG4B-226ENST00000625810 ADAMTS8Q9UP79 889 aa25.1■■□□□ 1.61
ATG4B-226ENST00000625810 SUSD4Q5VX71 490 aa25.09■■□□□ 1.61
ATG4B-226ENST00000625810 ZNF34Q8IZ26 560 aa25.09■■□□□ 1.61
ATG4B-226ENST00000625810 NECTIN2Q92692 538 aa25.09■■□□□ 1.61
ATG4B-226ENST00000625810 ANXA1P04083 346 aa25.08■■□□□ 1.61
ATG4B-226ENST00000625810 POTEIP0CG38 1075 aa25.08■■□□□ 1.61
ATG4B-226ENST00000625810 POTEJP0CG39 1038 aa25.08■■□□□ 1.61
ATG4B-226ENST00000625810 PDIA6Q15084 440 aa25.08■■□□□ 1.61
ATG4B-226ENST00000625810 PRKRIP1Q9H875 184 aaPredicted RBP25.08■■□□□ 1.61
ATG4B-226ENST00000625810 PPP1R42Q7Z4L9 355 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms