RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 CEP170BQ9Y4F5 1589 aaPredicted RBP10.94□□□□□ -0.66
USB1-216ENST00000624720 ABCC11Q96J66 1382 aa10.94□□□□□ -0.66
USB1-216ENST00000624720 SMAPO00193 183 aa10.94□□□□□ -0.66
USB1-216ENST00000624720 C20orf194Q5TEA3 1177 aa10.94□□□□□ -0.66
USB1-216ENST00000624720 EXOC6Q8TAG9 804 aa10.94□□□□□ -0.66
USB1-216ENST00000624720 CEP126Q9P2H0 1117 aa10.94□□□□□ -0.66
USB1-216ENST00000624720 STRCQ7RTU9 1775 aa10.94□□□□□ -0.66
USB1-216ENST00000624720 SETBP1Q9Y6X0 1596 aa10.94□□□□□ -0.66
USB1-216ENST00000624720 MYOM1P52179 1685 aa10.93□□□□□ -0.66
USB1-216ENST00000624720 NLRP1Q9C000 1473 aa10.93□□□□□ -0.66
USB1-216ENST00000624720 E2F4Q16254 413 aa10.93□□□□□ -0.66
USB1-216ENST00000624720 ESCO1Q5FWF5 840 aa10.93□□□□□ -0.66
USB1-216ENST00000624720 PRPF38AQ8NAV1 312 aaKnown RBP10.93□□□□□ -0.66
USB1-216ENST00000624720 COG3Q96JB2 828 aa10.93□□□□□ -0.66
USB1-216ENST00000624720 CHCHD3Q9NX63 227 aaKnown RBP10.93□□□□□ -0.66
USB1-216ENST00000624720 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.93□□□□□ -0.66
USB1-216ENST00000624720 A0A1B0GUL7 405 aa10.93□□□□□ -0.66
USB1-216ENST00000624720 KINO60870 393 aaKnown RBP10.93□□□□□ -0.66
USB1-216ENST00000624720 FAM161AQ3B820 660 aa10.93□□□□□ -0.66
USB1-216ENST00000624720 TSGA10IPQ3SY00 556 aa10.93□□□□□ -0.66
USB1-216ENST00000624720 GORABQ5T7V8 394 aa10.93□□□□□ -0.66
USB1-216ENST00000624720 TMX4Q9H1E5 349 aaPredicted RBP10.93□□□□□ -0.66
USB1-216ENST00000624720 MYO1CO00159 1063 aa10.92□□□□□ -0.66
USB1-216ENST00000624720 MARCH6O60337 910 aa10.92□□□□□ -0.66
USB1-216ENST00000624720 PPFIA2O75334 1257 aa10.92□□□□□ -0.66
USB1-216ENST00000624720 GOLGA2Q08379 1002 aa10.92□□□□□ -0.66
USB1-216ENST00000624720 GAS2L3Q86XJ1 694 aa10.92□□□□□ -0.66
USB1-216ENST00000624720 HELBQ8NG08 1087 aaPredicted RBP10.92□□□□□ -0.66
USB1-216ENST00000624720 TSR2Q969E8 191 aaKnown RBP10.92□□□□□ -0.66
USB1-216ENST00000624720 PPME1Q9Y570 386 aa10.92□□□□□ -0.66
USB1-216ENST00000624720 ARHGEF28Q8N1W1 1705 aaKnown RBP10.92□□□□□ -0.66
USB1-216ENST00000624720 KIF4AO95239 1232 aa10.92□□□□□ -0.66
USB1-216ENST00000624720 IRX1P78414 480 aaPredicted RBP10.92□□□□□ -0.66
USB1-216ENST00000624720 BCAR3O75815 825 aa10.91□□□□□ -0.66
USB1-216ENST00000624720 ERCC3P19447 782 aa10.91□□□□□ -0.66
USB1-216ENST00000624720 MAGEA8P43361 318 aa10.91□□□□□ -0.66
USB1-216ENST00000624720 PUS10Q3MIT2 529 aaKnown RBP10.91□□□□□ -0.66
USB1-216ENST00000624720 POLKQ9UBT6 870 aa10.91□□□□□ -0.66
USB1-216ENST00000624720 ELL2O00472 640 aaPredicted RBP10.91□□□□□ -0.66
USB1-216ENST00000624720 FOXO3O43524 673 aa10.91□□□□□ -0.66
USB1-216ENST00000624720 AP1ARQ63HQ0 302 aa10.91□□□□□ -0.66
USB1-216ENST00000624720 ANKRD7Q92527 254 aa10.91□□□□□ -0.66
USB1-216ENST00000624720 KIAA1210Q9ULL0 1709 aa10.91□□□□□ -0.66
USB1-216ENST00000624720 DIAPH1O60610 1272 aaKnown RBP10.91□□□□□ -0.66
USB1-216ENST00000624720 AMOTQ4VCS5 1084 aa10.91□□□□□ -0.66
USB1-216ENST00000624720 TATDN2Q93075 761 aa10.91□□□□□ -0.66
USB1-216ENST00000624720 IL16Q14005 1332 aa10.9□□□□□ -0.66
USB1-216ENST00000624720 FAM177BA6PVY3 158 aa10.9□□□□□ -0.66
USB1-216ENST00000624720 TRIM66O15016 1216 aa10.9□□□□□ -0.66
USB1-216ENST00000624720 OATP04181 439 aa10.9□□□□□ -0.66
USB1-216ENST00000624720 NLRP6P59044 892 aa10.9□□□□□ -0.66
USB1-216ENST00000624720 ORAI2Q96SN7 254 aa10.9□□□□□ -0.66
USB1-216ENST00000624720 ANTXR1Q9H6X2 564 aa10.9□□□□□ -0.66
USB1-216ENST00000624720 CPSF2Q9P2I0 782 aaKnown RBP10.9□□□□□ -0.66
USB1-216ENST00000624720 DDX41Q9UJV9 622 aaKnown RBP10.9□□□□□ -0.66
USB1-216ENST00000624720 NEURL4Q96JN8 1562 aa10.9□□□□□ -0.66
USB1-216ENST00000624720 PLEKHG1Q9ULL1 1385 aa10.9□□□□□ -0.66
USB1-216ENST00000624720 PRKAR2BP31323 418 aa10.9□□□□□ -0.67
USB1-216ENST00000624720 DCTN1Q14203 1278 aa10.9□□□□□ -0.67
USB1-216ENST00000624720 PROSER2Q86WR7 435 aaPredicted RBP10.9□□□□□ -0.67
USB1-216ENST00000624720 CLUAP1Q96AJ1 413 aa10.9□□□□□ -0.67
USB1-216ENST00000624720 TBX22Q9Y458 520 aa10.9□□□□□ -0.67
USB1-216ENST00000624720 MAPK8IP3Q9UPT6 1336 aa10.89□□□□□ -0.67
USB1-216ENST00000624720 CAPN15O75808 1086 aa10.89□□□□□ -0.67
USB1-216ENST00000624720 HSP90AB1P08238 724 aaKnown RBP10.89□□□□□ -0.67
USB1-216ENST00000624720 CYP2C19P33261 490 aa10.89□□□□□ -0.67
USB1-216ENST00000624720 PSMD2Q13200 908 aa10.89□□□□□ -0.67
USB1-216ENST00000624720 TTC31Q49AM3 519 aaPredicted RBP10.89□□□□□ -0.67
USB1-216ENST00000624720 HSP90AB2PQ58FF8 381 aa10.89□□□□□ -0.67
USB1-216ENST00000624720 NAIF1Q69YI7 327 aaPredicted RBP10.89□□□□□ -0.67
USB1-216ENST00000624720 MORC2Q9Y6X9 1032 aaPredicted RBP10.89□□□□□ -0.67
USB1-216ENST00000624720 REC8O95072 547 aa10.89□□□□□ -0.67
USB1-216ENST00000624720 ADCY2Q08462 1091 aa10.89□□□□□ -0.67
USB1-216ENST00000624720 BMS1Q14692 1282 aaKnown RBP10.89□□□□□ -0.67
USB1-216ENST00000624720 KRT222Q8N1A0 295 aa10.89□□□□□ -0.67
USB1-216ENST00000624720 SUN2Q9UH99 717 aa10.89□□□□□ -0.67
USB1-216ENST00000624720 SYNPO2Q9UMS6 1093 aa10.89□□□□□ -0.67
USB1-216ENST00000624720 IQSEC2Q5JU85 1478 aa10.89□□□□□ -0.67
USB1-216ENST00000624720 SMG6Q86US8 1419 aaKnown RBP10.88□□□□□ -0.67
USB1-216ENST00000624720 CD163L1Q9NR16 1453 aa10.88□□□□□ -0.67
USB1-216ENST00000624720 RRP1P56182 461 aaKnown RBP10.88□□□□□ -0.67
USB1-216ENST00000624720 MCTP2Q6DN12 878 aa10.88□□□□□ -0.67
USB1-216ENST00000624720 PPP4R3CPQ6ZMV5 832 aa10.88□□□□□ -0.67
USB1-216ENST00000624720 DZIP3Q86Y13 1208 aaKnown RBP10.88□□□□□ -0.67
USB1-216ENST00000624720 ZRANB2O95218 330 aaKnown RBP eCLIP10.88□□□□□ -0.67
USB1-216ENST00000624720 TRAF1Q13077 416 aa10.88□□□□□ -0.67
USB1-216ENST00000624720 MUM1L1Q5H9M0 696 aa10.88□□□□□ -0.67
USB1-216ENST00000624720 DUSP27Q5VZP5 1158 aa10.88□□□□□ -0.67
USB1-216ENST00000624720 WWC2Q6AWC2 1192 aa10.88□□□□□ -0.67
USB1-216ENST00000624720 ABTB2Q8N961 1025 aa10.88□□□□□ -0.67
USB1-216ENST00000624720 PHACTR3Q96KR7 559 aa10.88□□□□□ -0.67
USB1-216ENST00000624720 C22orf23Q9BZE7 217 aa10.88□□□□□ -0.67
USB1-216ENST00000624720 CWC15Q9P013 229 aaKnown RBP10.88□□□□□ -0.67
USB1-216ENST00000624720 FAM83GA6ND36 823 aa10.87□□□□□ -0.67
USB1-216ENST00000624720 DDX11L8A8MPP1 907 aa10.87□□□□□ -0.67
USB1-216ENST00000624720 EIF3JO75822 258 aaKnown RBP10.87□□□□□ -0.67
USB1-216ENST00000624720 SYT10Q6XYQ8 523 aa10.87□□□□□ -0.67
USB1-216ENST00000624720 GAS2L2Q8NHY3 880 aa10.87□□□□□ -0.67
USB1-216ENST00000624720 RUNDC1Q96C34 613 aa10.87□□□□□ -0.67
USB1-216ENST00000624720 THOC1Q96FV9 657 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms