RNA–Protein interactions for RNA: ENST00000623650.3

SNHG5-217, Transcript of small nucleolar RNA host gene 5, human

TSL 5

Gene SNHG5, Length 886 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG5-217	ENST00000623650	HPS5	Q9UPZ3	1129 aa		10.86	□□□□□ -0.67
SNHG5-217	ENST00000623650	XIRP1	Q702N8	1843 aa	Known RBP	10.86	□□□□□ -0.67
SNHG5-217	ENST00000623650	MON2	Q7Z3U7	1717 aa		10.85	□□□□□ -0.67
SNHG5-217	ENST00000623650	ZBTB7C	A1YPR0	619 aa		10.85	□□□□□ -0.67
SNHG5-217	ENST00000623650	BCAM	P50895	628 aa		10.85	□□□□□ -0.67
SNHG5-217	ENST00000623650	CCDC97	Q96F63	343 aa	Predicted RBP	10.85	□□□□□ -0.67
SNHG5-217	ENST00000623650	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.85	□□□□□ -0.67
SNHG5-217	ENST00000623650	TSR3	Q9UJK0	312 aa	Known RBP	10.85	□□□□□ -0.67
SNHG5-217	ENST00000623650	CD163L1	Q9NR16	1453 aa		10.85	□□□□□ -0.67
SNHG5-217	ENST00000623650	AKAP12	Q02952	1782 aa		10.85	□□□□□ -0.67
SNHG5-217	ENST00000623650	FYB1	O15117	783 aa		10.84	□□□□□ -0.67
SNHG5-217	ENST00000623650	PPM1G	O15355	546 aa	Predicted RBP	10.84	□□□□□ -0.67
SNHG5-217	ENST00000623650	WDR43	Q15061	677 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
SNHG5-217	ENST00000623650	NUTM2G	Q5VZR2	741 aa		10.84	□□□□□ -0.67
SNHG5-217	ENST00000623650	WNT2B	Q93097	391 aa		10.84	□□□□□ -0.67
SNHG5-217	ENST00000623650	MRS2	Q9HD23	443 aa		10.84	□□□□□ -0.67
SNHG5-217	ENST00000623650	KIF20B	Q96Q89	1820 aa		10.84	□□□□□ -0.67
SNHG5-217	ENST00000623650	ROBO1	Q9Y6N7	1651 aa		10.83	□□□□□ -0.68
SNHG5-217	ENST00000623650	CCER2	I3L3R5	266 aa		10.83	□□□□□ -0.68
SNHG5-217	ENST00000623650	PER1	O15534	1290 aa	Predicted RBP	10.83	□□□□□ -0.68
SNHG5-217	ENST00000623650	NEFM	P07197	916 aa		10.83	□□□□□ -0.68
SNHG5-217	ENST00000623650	HSPA1L	P34931	641 aa		10.83	□□□□□ -0.68
SNHG5-217	ENST00000623650	AMPH	P49418	695 aa		10.83	□□□□□ -0.68
SNHG5-217	ENST00000623650	APLP1	P51693	650 aa		10.83	□□□□□ -0.68
SNHG5-217	ENST00000623650	DESI1	Q6ICB0	168 aa		10.83	□□□□□ -0.68
SNHG5-217	ENST00000623650	NUDC	Q9Y266	331 aa		10.83	□□□□□ -0.68
SNHG5-217	ENST00000623650	SMG6	Q86US8	1419 aa	Known RBP	10.83	□□□□□ -0.68
SNHG5-217	ENST00000623650	RGPD8	O14715	1765 aa	Predicted RBP	10.82	□□□□□ -0.68
SNHG5-217	ENST00000623650	PARD3	Q8TEW0	1356 aa		10.82	□□□□□ -0.68
SNHG5-217	ENST00000623650	HCST	Q9UBK5	93 aa		10.82	□□□□□ -0.68
SNHG5-217	ENST00000623650	SALL2	Q9Y467	1007 aa	Predicted RBP	10.82	□□□□□ -0.68
SNHG5-217	ENST00000623650	SOS2	Q07890	1332 aa	Predicted RBP	10.82	□□□□□ -0.68
SNHG5-217	ENST00000623650	SPATA31A3	Q5VYP0	1347 aa		10.82	□□□□□ -0.68
SNHG5-217	ENST00000623650	USP31	Q70CQ4	1352 aa		10.81	□□□□□ -0.68
SNHG5-217	ENST00000623650	IRF5	Q13568	498 aa		10.81	□□□□□ -0.68
SNHG5-217	ENST00000623650	DDX17	Q92841	729 aa	Known RBP	10.81	□□□□□ -0.68
SNHG5-217	ENST00000623650	PCDHB3	Q9Y5E6	796 aa		10.81	□□□□□ -0.68
SNHG5-217	ENST00000623650	PXDN	Q92626	1479 aa		10.81	□□□□□ -0.68
SNHG5-217	ENST00000623650	AHDC1	Q5TGY3	1603 aa	Predicted RBP	10.8	□□□□□ -0.68
SNHG5-217	ENST00000623650	WASHC4	Q2M389	1173 aa		10.8	□□□□□ -0.68
SNHG5-217	ENST00000623650	BRICD5	Q6PL45	260 aa		10.8	□□□□□ -0.68
SNHG5-217	ENST00000623650	BLOC1S3	Q6QNY0	202 aa		10.8	□□□□□ -0.68
SNHG5-217	ENST00000623650	RNF19B	Q6ZMZ0	732 aa		10.8	□□□□□ -0.68
SNHG5-217	ENST00000623650	SCUBE3	Q8IX30	993 aa		10.8	□□□□□ -0.68
SNHG5-217	ENST00000623650	USB1	Q9BQ65	265 aa	Known RBP	10.8	□□□□□ -0.68
SNHG5-217	ENST00000623650	MED1	Q15648	1581 aa	Predicted RBP	10.8	□□□□□ -0.68
SNHG5-217	ENST00000623650	NRK	Q7Z2Y5	1582 aa		10.8	□□□□□ -0.68
SNHG5-217	ENST00000623650	PHLPP1	O60346	1717 aa		10.79	□□□□□ -0.68
SNHG5-217	ENST00000623650	OVOS2	A0A0J9YW53	1432 aa		10.79	□□□□□ -0.68
SNHG5-217	ENST00000623650	OVOS2	Q6IE36	1432 aa		10.79	□□□□□ -0.68
SNHG5-217	ENST00000623650	POM121C	A8CG34	1229 aa		10.79	□□□□□ -0.68
SNHG5-217	ENST00000623650	NR1I2	O75469	434 aa		10.79	□□□□□ -0.68
SNHG5-217	ENST00000623650	PPP2R1A	P30153	589 aa		10.79	□□□□□ -0.68
SNHG5-217	ENST00000623650	MEX3C	Q5U5Q3	659 aa	Known RBP	10.79	□□□□□ -0.68
SNHG5-217	ENST00000623650	EPS8L1	Q8TE68	723 aa		10.79	□□□□□ -0.68
SNHG5-217	ENST00000623650	CALR3	Q96L12	384 aa	Known RBP	10.79	□□□□□ -0.68
SNHG5-217	ENST00000623650	PNN	Q9H307	717 aa	Known RBP	10.79	□□□□□ -0.68
SNHG5-217	ENST00000623650	AATK	Q6ZMQ8	1374 aa		10.78	□□□□□ -0.68
SNHG5-217	ENST00000623650	JCAD	Q9P266	1359 aa		10.78	□□□□□ -0.68
SNHG5-217	ENST00000623650	SSH2	Q76I76	1423 aa		10.78	□□□□□ -0.68
SNHG5-217	ENST00000623650	NHSL1	Q5SYE7	1610 aa		10.78	□□□□□ -0.68
SNHG5-217	ENST00000623650	GPR37L1	O60883	481 aa		10.78	□□□□□ -0.68
SNHG5-217	ENST00000623650	FMNL1	O95466	1100 aa	Predicted RBP	10.78	□□□□□ -0.68
SNHG5-217	ENST00000623650	NR6A1	Q15406	480 aa		10.78	□□□□□ -0.68
SNHG5-217	ENST00000623650	PRDM11	Q9NQV5	511 aa		10.78	□□□□□ -0.68
SNHG5-217	ENST00000623650	ANKRD26	Q9UPS8	1709 aa		10.78	□□□□□ -0.68
SNHG5-217	ENST00000623650	RTL1	A6NKG5	1358 aa		10.77	□□□□□ -0.68
SNHG5-217	ENST00000623650	GC	P02774	474 aa		10.77	□□□□□ -0.69
SNHG5-217	ENST00000623650	CSB-PGBD3	P0DP91	1061 aa		10.77	□□□□□ -0.69
SNHG5-217	ENST00000623650	MTHFS	P49914	203 aa		10.77	□□□□□ -0.69
SNHG5-217	ENST00000623650	LYPD8	Q6UX82	237 aa		10.77	□□□□□ -0.69
SNHG5-217	ENST00000623650	GLMN	Q92990	594 aa		10.77	□□□□□ -0.69
SNHG5-217	ENST00000623650	FLT4	P35916	1363 aa		10.77	□□□□□ -0.69
SNHG5-217	ENST00000623650	KIF24	Q5T7B8	1368 aa		10.77	□□□□□ -0.69
SNHG5-217	ENST00000623650	PIK3C2A	O00443	1686 aa		10.76	□□□□□ -0.69
SNHG5-217	ENST00000623650	U2SURP	O15042	1029 aa	Known RBP	10.76	□□□□□ -0.69
SNHG5-217	ENST00000623650	DIAPH1	O60610	1272 aa	Known RBP	10.76	□□□□□ -0.69
SNHG5-217	ENST00000623650	THAP11	Q96EK4	314 aa		10.76	□□□□□ -0.69
SNHG5-217	ENST00000623650	WBP1L	Q9NX94	342 aa		10.76	□□□□□ -0.69
SNHG5-217	ENST00000623650	USP19	O94966	1318 aa		10.76	□□□□□ -0.69
SNHG5-217	ENST00000623650	ZC3H6	P61129	1189 aa	Known RBP	10.75	□□□□□ -0.69
SNHG5-217	ENST00000623650	RRS1	Q15050	365 aa	Known RBP	10.75	□□□□□ -0.69
SNHG5-217	ENST00000623650	SPATA31A6	Q5VVP1	1343 aa		10.75	□□□□□ -0.69
SNHG5-217	ENST00000623650	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.75	□□□□□ -0.69
SNHG5-217	ENST00000623650	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.74	□□□□□ -0.69
SNHG5-217	ENST00000623650	EVA1C	P58658	441 aa		10.74	□□□□□ -0.69
SNHG5-217	ENST00000623650	ILDR2	Q71H61	639 aa		10.74	□□□□□ -0.69
SNHG5-217	ENST00000623650	FAM9B	Q8IZU0	186 aa		10.74	□□□□□ -0.69
SNHG5-217	ENST00000623650	MAPK8IP3	Q9UPT6	1336 aa		10.74	□□□□□ -0.69
SNHG5-217	ENST00000623650	PNPLA6	Q8IY17	1366 aa		10.74	□□□□□ -0.69
SNHG5-217	ENST00000623650	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.73	□□□□□ -0.69
SNHG5-217	ENST00000623650	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.73	□□□□□ -0.69	8e-14	■■■□□ 16.2
SNHG5-217	ENST00000623650	VAC14	Q08AM6	782 aa		10.73	□□□□□ -0.69
SNHG5-217	ENST00000623650	HDGFL1	Q5TGJ6	251 aa		10.73	□□□□□ -0.69
SNHG5-217	ENST00000623650	THSD4	Q6ZMP0	1018 aa		10.73	□□□□□ -0.69
SNHG5-217	ENST00000623650	PNMA1	Q8ND90	353 aa		10.73	□□□□□ -0.69
SNHG5-217	ENST00000623650	POLK	Q9UBT6	870 aa		10.73	□□□□□ -0.69
SNHG5-217	ENST00000623650	EMILIN1	Q9Y6C2	1016 aa		10.73	□□□□□ -0.69
SNHG5-217	ENST00000623650	MAP3K19	Q56UN5	1328 aa		10.73	□□□□□ -0.69
SNHG5-217	ENST00000623650	SLIT3	O75094	1523 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms