RNA–Protein interactions for RNA: ENST00000623385.3

TRIM39-RPP21-201, Transcript of TRIM39-RPP21 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM39-RPP21, Length 1,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-RPP21-201ENST00000623385 KIF16BQ96L93 1317 aa16.74■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 HMGB2P26583 209 aaKnown RBP16.74■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 HLFQ16534 295 aa16.74■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 ANKRD13DQ6ZTN6 518 aa16.74■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 ARXQ96QS3 562 aa16.74■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 PDGFDQ9GZP0 370 aaPredicted RBP16.74■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 BCL2L12Q9HB09 334 aa16.74■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 C4AP0C0L4 1744 aa16.74■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 PTPRCP08575 1304 aa16.74■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 ADRA2BP18089 450 aa16.73■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 KSR2Q6VAB6 950 aa16.73■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 PLBD2Q8NHP8 589 aa16.73■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 MAP3K15Q6ZN16 1313 aa16.73■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 CACNA1FO60840 1977 aa16.73■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 RRP1P56182 461 aaKnown RBP16.72■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 C20orf194Q5TEA3 1177 aa16.72■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 ZKSCAN2Q63HK3 967 aa16.72■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 ATF7IPQ6VMQ6 1270 aa16.72■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 ARHGAP45Q92619 1136 aa16.72■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 MAP3K2Q9Y2U5 619 aa16.72■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 USP42Q9H9J4 1324 aaKnown RBP16.72■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 RLBP1P12271 317 aa16.72■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 USPL1Q5W0Q7 1092 aa16.72■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 CLUAP1Q96AJ1 413 aa16.72■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 NARFQ9UHQ1 456 aa16.72■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 A0A087WZG4 1122 aa16.71■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 RFC4P35249 363 aa16.71■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 KIF6Q6ZMV9 814 aa16.71■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 RIC3Q7Z5B4 369 aa16.71■□□□□ 0.27
TRIM39-RPP21-201ENST00000623385 ERVV-1B6SEH8 477 aa16.7■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 NPM2Q86SE8 214 aaKnown RBP16.7■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 ARFGEF2Q9Y6D5 1785 aa16.7■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 IPO8O15397 1037 aaKnown RBP16.69■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 ABCC4O15439 1325 aa16.69■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 DDX58O95786 925 aaKnown RBP16.69■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 SCN7AQ01118 1682 aa16.69■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 QSER1Q2KHR3 1735 aa16.69■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 BCORQ6W2J9 1755 aa16.69■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 PANK1Q8TE04 598 aa16.69■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 DNAAF4Q8WXU2 420 aa16.69■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 API5Q9BZZ5 524 aaKnown RBP16.69■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 GYS1P13807 737 aa16.69■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 R3HDM1Q15032 1099 aaKnown RBP16.69■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 GIGYF2Q6Y7W6 1299 aaKnown RBP16.69■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 METTL22Q9BUU2 404 aaPredicted RBP16.69■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 IGKV5-2P06315 115 aa16.68■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 FKBP8Q14318 412 aa16.68■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 BEND3Q5T5X7 828 aa16.68■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 SLC4A10Q6U841 1118 aa16.68■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 FLAD1Q8NFF5 587 aa16.68■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 MYD88Q99836 296 aa16.68■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 ATP5J2-PTCD1G3V325 749 aa16.67■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 MSH5O43196 834 aa16.67■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 ZPR1O75312 459 aa16.67■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 TCIRG1Q13488 830 aa16.67■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 CWF19L2Q2TBE0 894 aaKnown RBP16.67■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 PSDA5PKW4 1024 aaPredicted RBP16.66■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 TBC1D9BQ66K14 1250 aa16.66■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 DZIP1LQ8IYY4 767 aaKnown RBP16.66■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 TMEM57Q8N5G2 664 aa16.66■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 ISCA1Q9BUE6 129 aa16.66■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 UBN2Q6ZU65 1347 aa16.66■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 CLEC4GQ6UXB4 293 aa16.65■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 ZNF34Q8IZ26 560 aa16.65■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.65■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 NUP98P52948 1817 aa16.65■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 RGL2O15211 777 aa16.65■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 GPTP24298 496 aa16.65■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 INTS3Q68E01 1043 aaKnown RBP16.65■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 PXDNLA1KZ92 1463 aa16.65■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 ATP10DQ9P241 1426 aa16.65■□□□□ 0.26
TRIM39-RPP21-201ENST00000623385 PDE3AQ14432 1141 aa16.64■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 NFIXQ14938 502 aa16.64■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 LINS1Q8NG48 757 aa16.64■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 CASZ1Q86V15 1759 aa16.64■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 NEURL1BA8MQ27 555 aa16.63■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 IRX6P78412 446 aaPredicted RBP16.63■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 MSL1Q68DK7 614 aa16.63■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 BICDL1Q6ZP65 573 aa16.63■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 TM4SF1P30408 202 aa16.62■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 TRIM28Q13263 835 aaKnown RBP16.62■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 NLRP10Q86W26 655 aa16.62■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 FTSJ3Q8IY81 847 aaKnown RBP16.62■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 NIP7Q9Y221 180 aaKnown RBP eCLIP16.62■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 ZNF652Q9Y2D9 606 aa16.62■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 COG6Q9Y2V7 657 aa16.62■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 HSP90AB3PQ58FF7 597 aa16.62■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 SUSD4Q5VX71 490 aa16.62■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 SRCIN1Q9C0H9 1055 aa16.62■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 ANKRD36CQ5JPF3 1778 aa16.62■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 CCT4P50991 539 aaKnown RBP16.61■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 DDR1Q08345 913 aa16.61■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 NEXNQ0ZGT2 675 aa16.61■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 N4BP2Q86UW6 1770 aaPredicted RBP16.61■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 GCKRQ14397 625 aa16.6■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 NLGN1Q8N2Q7 840 aa16.6■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 JARID2Q92833 1246 aaPredicted RBP16.6■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 ALDH1L1O75891 902 aa16.59■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 ZBTB7AO95365 584 aa16.59■□□□□ 0.25
TRIM39-RPP21-201ENST00000623385 MVPQ14764 893 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms