RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 C7orf43Q8WVR3 580 aa12.16□□□□□ -0.46
PCDHB9-202ENST00000623266 PDZRN3Q9UPQ7 1066 aa12.16□□□□□ -0.46
PCDHB9-202ENST00000623266 COL11A2P13942 1736 aaPredicted RBP12.16□□□□□ -0.46
PCDHB9-202ENST00000623266 SCN7AQ01118 1682 aa12.16□□□□□ -0.46
PCDHB9-202ENST00000623266 PCNTO95613 3336 aa12.16□□□□□ -0.46
PCDHB9-202ENST00000623266 BCORQ6W2J9 1755 aa12.15□□□□□ -0.46
PCDHB9-202ENST00000623266 CACNA1SQ13698 1873 aa12.15□□□□□ -0.46
PCDHB9-202ENST00000623266 KLRG2A4D1S0 409 aaPredicted RBP12.15□□□□□ -0.46
PCDHB9-202ENST00000623266 FSTL1Q12841 308 aa12.15□□□□□ -0.46
PCDHB9-202ENST00000623266 IFFO2Q5TF58 517 aa12.15□□□□□ -0.46
PCDHB9-202ENST00000623266 VEGFAP15692 232 aaPredicted RBP12.14□□□□□ -0.47
PCDHB9-202ENST00000623266 STYK1Q6J9G0 422 aa12.14□□□□□ -0.47
PCDHB9-202ENST00000623266 NPM2Q86SE8 214 aaKnown RBP12.14□□□□□ -0.47
PCDHB9-202ENST00000623266 C16orf71Q8IYS4 520 aaPredicted RBP12.14□□□□□ -0.47
PCDHB9-202ENST00000623266 ZC3H4Q9UPT8 1303 aaKnown RBP12.13□□□□□ -0.47
PCDHB9-202ENST00000623266 EIF4A1P60842 406 aaKnown RBP12.13□□□□□ -0.47
PCDHB9-202ENST00000623266 CNBD1Q8NA66 436 aa12.13□□□□□ -0.47
PCDHB9-202ENST00000623266 CNKSR1Q969H4 720 aa12.13□□□□□ -0.47
PCDHB9-202ENST00000623266 MASTLQ96GX5 879 aa12.13□□□□□ -0.47
PCDHB9-202ENST00000623266 THUMPD2Q9BTF0 503 aaKnown RBP12.13□□□□□ -0.47
PCDHB9-202ENST00000623266 WDR90Q96KV7 1748 aa12.13□□□□□ -0.47
PCDHB9-202ENST00000623266 TNRC6CQ9HCJ0 1690 aaKnown RBP12.13□□□□□ -0.47
PCDHB9-202ENST00000623266 NUP98P52948 1817 aa12.12□□□□□ -0.47
PCDHB9-202ENST00000623266 TPTE2Q6XPS3 522 aa12.12□□□□□ -0.47
PCDHB9-202ENST00000623266 FAM177BA6PVY3 158 aa12.11□□□□□ -0.47
PCDHB9-202ENST00000623266 ST5P78524 1137 aa12.11□□□□□ -0.47
PCDHB9-202ENST00000623266 NFE2L2Q16236 605 aa12.11□□□□□ -0.47
PCDHB9-202ENST00000623266 ERFEQ4G0M1 354 aa12.11□□□□□ -0.47
PCDHB9-202ENST00000623266 PRPF40BQ6NWY9 871 aaKnown RBP12.11□□□□□ -0.47
PCDHB9-202ENST00000623266 OLFM4Q6UX06 510 aa12.11□□□□□ -0.47
PCDHB9-202ENST00000623266 TTLL7Q6ZT98 887 aa12.11□□□□□ -0.47
PCDHB9-202ENST00000623266 NBPF5PQ86XG9 351 aaPredicted RBP12.11□□□□□ -0.47
PCDHB9-202ENST00000623266 NGEFQ8N5V2 710 aa12.11□□□□□ -0.47
PCDHB9-202ENST00000623266 NIP7Q9Y221 180 aaKnown RBP eCLIP12.11□□□□□ -0.47
PCDHB9-202ENST00000623266 LTBP3Q9NS15 1303 aa12.11□□□□□ -0.47
PCDHB9-202ENST00000623266 KDM3BQ7LBC6 1761 aa12.1□□□□□ -0.47
PCDHB9-202ENST00000623266 RGL2O15211 777 aa12.1□□□□□ -0.47
PCDHB9-202ENST00000623266 DDNO94850 711 aaPredicted RBP12.1□□□□□ -0.47
PCDHB9-202ENST00000623266 DPY19L2Q6NUT2 758 aa12.1□□□□□ -0.47
PCDHB9-202ENST00000623266 JMYQ8N9B5 988 aa12.1□□□□□ -0.47
PCDHB9-202ENST00000623266 KLRG1Q96E93 195 aa12.1□□□□□ -0.47
PCDHB9-202ENST00000623266 RRP7AQ9Y3A4 280 aaKnown RBP12.1□□□□□ -0.47
PCDHB9-202ENST00000623266 TIAM2Q8IVF5 1701 aa12.1□□□□□ -0.47
PCDHB9-202ENST00000623266 ARFGEF2Q9Y6D5 1785 aa12.1□□□□□ -0.47
PCDHB9-202ENST00000623266 ERVV-1B6SEH8 477 aa12.09□□□□□ -0.47
PCDHB9-202ENST00000623266 NPR1P16066 1061 aa12.09□□□□□ -0.47
PCDHB9-202ENST00000623266 SMC1BQ8NDV3 1235 aa12.09□□□□□ -0.47
PCDHB9-202ENST00000623266 PNISRQ8TF01 805 aaKnown RBP12.09□□□□□ -0.47
PCDHB9-202ENST00000623266 ZNF652Q9Y2D9 606 aa12.09□□□□□ -0.47
PCDHB9-202ENST00000623266 NPHP1O15259 732 aa12.08□□□□□ -0.48
PCDHB9-202ENST00000623266 POTEIP0CG38 1075 aa12.08□□□□□ -0.48
PCDHB9-202ENST00000623266 POTEJP0CG39 1038 aa12.08□□□□□ -0.48
PCDHB9-202ENST00000623266 PDIA6Q15084 440 aa12.08□□□□□ -0.48
PCDHB9-202ENST00000623266 LRP10Q7Z4F1 713 aa12.08□□□□□ -0.48
PCDHB9-202ENST00000623266 TAOK3Q9H2K8 898 aa12.08□□□□□ -0.48
PCDHB9-202ENST00000623266 MYL6BP14649 208 aa12.07□□□□□ -0.48
PCDHB9-202ENST00000623266 RIPK4P57078 832 aa12.07□□□□□ -0.48
PCDHB9-202ENST00000623266 SUSD4Q5VX71 490 aa12.07□□□□□ -0.48
PCDHB9-202ENST00000623266 NUTM1Q86Y26 1132 aa12.07□□□□□ -0.48
PCDHB9-202ENST00000623266 ZNF34Q8IZ26 560 aa12.07□□□□□ -0.48
PCDHB9-202ENST00000623266 MAP3K15Q6ZN16 1313 aa12.07□□□□□ -0.48
PCDHB9-202ENST00000623266 LAMB4A4D0S4 1761 aa12.06□□□□□ -0.48
PCDHB9-202ENST00000623266 ALDH1B1P30837 517 aa12.06□□□□□ -0.48
PCDHB9-202ENST00000623266 NEFMP07197 916 aa12.05□□□□□ -0.48
PCDHB9-202ENST00000623266 TMPOP42166 694 aaKnown RBP12.05□□□□□ -0.48
PCDHB9-202ENST00000623266 FKBP4Q02790 459 aaKnown RBP eCLIP12.05□□□□□ -0.48
PCDHB9-202ENST00000623266 DDX10Q13206 875 aaKnown RBP12.05□□□□□ -0.48
PCDHB9-202ENST00000623266 CRY2Q49AN0 593 aa12.05□□□□□ -0.48
PCDHB9-202ENST00000623266 SOGA3Q5TF21 947 aa12.05□□□□□ -0.48
PCDHB9-202ENST00000623266 SLC51AQ86UW1 340 aa12.05□□□□□ -0.48
PCDHB9-202ENST00000623266 SYNE4Q8N205 404 aa12.05□□□□□ -0.48
PCDHB9-202ENST00000623266 PNNQ9H307 717 aaKnown RBP12.05□□□□□ -0.48
PCDHB9-202ENST00000623266 ZNF277Q9NRM2 450 aaPredicted RBP12.05□□□□□ -0.48
PCDHB9-202ENST00000623266 UBN2Q6ZU65 1347 aa12.05□□□□□ -0.48
PCDHB9-202ENST00000623266 ANXA1P04083 346 aa12.04□□□□□ -0.48
PCDHB9-202ENST00000623266 GPTP24298 496 aa12.04□□□□□ -0.48
PCDHB9-202ENST00000623266 GTF2E1P29083 439 aaPredicted RBP12.04□□□□□ -0.48
PCDHB9-202ENST00000623266 HOXA10P31260 410 aaPredicted RBP12.04□□□□□ -0.48
PCDHB9-202ENST00000623266 RALBP1Q15311 655 aa12.04□□□□□ -0.48
PCDHB9-202ENST00000623266 PROSER3Q2NL68 480 aa12.04□□□□□ -0.48
PCDHB9-202ENST00000623266 CCDC93Q567U6 631 aa12.04□□□□□ -0.48
PCDHB9-202ENST00000623266 GIGYF2Q6Y7W6 1299 aaKnown RBP12.04□□□□□ -0.48
PCDHB9-202ENST00000623266 C3orf67Q6ZVT6 689 aa12.04□□□□□ -0.48
PCDHB9-202ENST00000623266 ZBTB3Q9H5J0 574 aa12.04□□□□□ -0.48
PCDHB9-202ENST00000623266 SNED1Q8TER0 1413 aa12.03□□□□□ -0.48
PCDHB9-202ENST00000623266 FZD9O00144 591 aa12.03□□□□□ -0.48
PCDHB9-202ENST00000623266 EIF2S2P20042 333 aaKnown RBP12.03□□□□□ -0.48
PCDHB9-202ENST00000623266 SLC10A5Q5PT55 438 aa12.03□□□□□ -0.48
PCDHB9-202ENST00000623266 COL13A1Q5TAT6 717 aaPredicted RBP12.03□□□□□ -0.48
PCDHB9-202ENST00000623266 RTKN2Q8IZC4 609 aa12.03□□□□□ -0.48
PCDHB9-202ENST00000623266 NYXQ9GZU5 481 aa12.03□□□□□ -0.48
PCDHB9-202ENST00000623266 ABCC12Q96J65 1359 aa12.03□□□□□ -0.48
PCDHB9-202ENST00000623266 SCN4AP35499 1836 aa12.02□□□□□ -0.48
PCDHB9-202ENST00000623266 NTSR2O95665 410 aa12.02□□□□□ -0.49
PCDHB9-202ENST00000623266 ITGBL1O95965 494 aaPredicted RBP12.02□□□□□ -0.49
PCDHB9-202ENST00000623266 CHADLQ6NUI6 762 aa12.02□□□□□ -0.49
PCDHB9-202ENST00000623266 L3MBTL3Q96JM7 780 aaPredicted RBP12.02□□□□□ -0.49
PCDHB9-202ENST00000623266 TAF1DQ9H5J8 278 aaPredicted RBP12.02□□□□□ -0.49
PCDHB9-202ENST00000623266 BABAM1Q9NWV8 329 aa12.02□□□□□ -0.49
PCDHB9-202ENST00000623266 TSPYL4Q9UJ04 414 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms