RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 PRPF40BQ6NWY9 871 aaKnown RBP21.66■■□□□ 1.06
CD99-211ENST00000623253 NBPF5PQ86XG9 351 aaPredicted RBP21.66■■□□□ 1.06
CD99-211ENST00000623253 RSPH6AQ9H0K4 717 aa21.66■■□□□ 1.06
CD99-211ENST00000623253 NUDCQ9Y266 331 aa21.66■■□□□ 1.06
CD99-211ENST00000623253 U2AF1L5P0DN76 240 aaPredicted RBP21.65■■□□□ 1.06
CD99-211ENST00000623253 SRGNP10124 158 aa21.65■■□□□ 1.06
CD99-211ENST00000623253 U2AF1Q01081 240 aaKnown RBP eCLIP21.65■■□□□ 1.06
CD99-211ENST00000623253 MCM10Q7L590 875 aa21.65■■□□□ 1.06
CD99-211ENST00000623253 MASTLQ96GX5 879 aa21.65■■□□□ 1.06
CD99-211ENST00000623253 SIPA1L3O60292 1781 aaPredicted RBP21.65■■□□□ 1.06
CD99-211ENST00000623253 COL11A2P13942 1736 aaPredicted RBP21.64■■□□□ 1.06
CD99-211ENST00000623253 DDNO94850 711 aaPredicted RBP21.64■■□□□ 1.05
CD99-211ENST00000623253 TNS4Q8IZW8 715 aa21.64■■□□□ 1.05
CD99-211ENST00000623253 LTBP3Q9NS15 1303 aa21.63■■□□□ 1.05
CD99-211ENST00000623253 SNRPA1P09661 255 aaKnown RBP21.63■■□□□ 1.05
CD99-211ENST00000623253 SOGA3Q5TF21 947 aa21.63■■□□□ 1.05
CD99-211ENST00000623253 ZNF652Q9Y2D9 606 aa21.63■■□□□ 1.05
CD99-211ENST00000623253 HSPA1AP0DMV8 641 aaKnown RBP21.62■■□□□ 1.05
CD99-211ENST00000623253 HSPA1BP0DMV9 641 aaKnown RBP21.62■■□□□ 1.05
CD99-211ENST00000623253 CHADLQ6NUI6 762 aa21.62■■□□□ 1.05
CD99-211ENST00000623253 FAM177BA6PVY3 158 aa21.61■■□□□ 1.05
CD99-211ENST00000623253 DCTN1Q14203 1278 aa21.61■■□□□ 1.05
CD99-211ENST00000623253 CLEC4GQ6UXB4 293 aa21.61■■□□□ 1.05
CD99-211ENST00000623253 NIP7Q9Y221 180 aaKnown RBP eCLIP21.6■■□□□ 1.05
CD99-211ENST00000623253 FER1L6Q2WGJ9 1857 aa21.6■■□□□ 1.05
CD99-211ENST00000623253 POTEIP0CG38 1075 aa21.59■■□□□ 1.05
CD99-211ENST00000623253 POTEJP0CG39 1038 aa21.59■■□□□ 1.05
CD99-211ENST00000623253 TPTE2Q6XPS3 522 aa21.59■■□□□ 1.05
CD99-211ENST00000623253 SLX4Q8IY92 1834 aa21.59■■□□□ 1.05
CD99-211ENST00000623253 NPR1P16066 1061 aa21.58■■□□□ 1.05
CD99-211ENST00000623253 CCDC93Q567U6 631 aa21.58■■□□□ 1.05
CD99-211ENST00000623253 MKRN1Q9UHC7 482 aaKnown RBP21.58■■□□□ 1.05
CD99-211ENST00000623253 NBPF26B4DH59 902 aa21.57■■□□□ 1.04
CD99-211ENST00000623253 GTF2E1P29083 439 aaPredicted RBP21.57■■□□□ 1.04
CD99-211ENST00000623253 PPP2R1AP30153 589 aa21.57■■□□□ 1.04
CD99-211ENST00000623253 NBPF10Q6P3W6 841 aaKnown RBP21.57■■□□□ 1.04
CD99-211ENST00000623253 NBPF15Q8N660 670 aa21.57■■□□□ 1.04
CD99-211ENST00000623253 BCORQ6W2J9 1755 aa21.56■■□□□ 1.04
CD99-211ENST00000623253 IQCA1LA6NCM1 817 aa21.56■■□□□ 1.04
CD99-211ENST00000623253 C7orf43Q8WVR3 580 aa21.56■■□□□ 1.04
CD99-211ENST00000623253 CREBZFQ9NS37 354 aa21.56■■□□□ 1.04
CD99-211ENST00000623253 MIS18AQ9NYP9 233 aa21.56■■□□□ 1.04
CD99-211ENST00000623253 CACNA1SQ13698 1873 aa21.56■■□□□ 1.04
CD99-211ENST00000623253 DICER1Q9UPY3 1922 aaKnown RBP21.55■■□□□ 1.04
CD99-211ENST00000623253 OLFM4Q6UX06 510 aa21.55■■□□□ 1.04
CD99-211ENST00000623253 ZNF277Q9NRM2 450 aaPredicted RBP21.55■■□□□ 1.04
CD99-211ENST00000623253 TAF7Q15545 349 aaPredicted RBP21.54■■□□□ 1.04
CD99-211ENST00000623253 NGEFQ8N5V2 710 aa21.54■■□□□ 1.04
CD99-211ENST00000623253 HTATSF1O43719 755 aaKnown RBP21.53■■□□□ 1.04
CD99-211ENST00000623253 FKBP4Q02790 459 aaKnown RBP eCLIP21.53■■□□□ 1.04
CD99-211ENST00000623253 HLFQ16534 295 aa21.53■■□□□ 1.04
CD99-211ENST00000623253 EAPPQ56P03 285 aaPredicted RBP21.53■■□□□ 1.04
CD99-211ENST00000623253 PCNTO95613 3336 aa21.53■■□□□ 1.04
CD99-211ENST00000623253 KLRG2A4D1S0 409 aaPredicted RBP21.52■■□□□ 1.04
CD99-211ENST00000623253 LDHDQ86WU2 507 aa21.52■■□□□ 1.04
CD99-211ENST00000623253 RTKN2Q8IZC4 609 aa21.52■■□□□ 1.04
CD99-211ENST00000623253 TAF1DQ9H5J8 278 aaPredicted RBP21.52■■□□□ 1.04
CD99-211ENST00000623253 NEFMP07197 916 aa21.51■■□□□ 1.03
CD99-211ENST00000623253 ALDH1B1P30837 517 aa21.51■■□□□ 1.03
CD99-211ENST00000623253 L3MBTL3Q96JM7 780 aaPredicted RBP21.51■■□□□ 1.03
CD99-211ENST00000623253 CLEC11AQ9Y240 323 aa21.51■■□□□ 1.03
CD99-211ENST00000623253 ZNF541Q9H0D2 1346 aa21.51■■□□□ 1.03
CD99-211ENST00000623253 ARFGEF2Q9Y6D5 1785 aa21.49■■□□□ 1.03
CD99-211ENST00000623253 RGL2O15211 777 aa21.49■■□□□ 1.03
CD99-211ENST00000623253 SYNE4Q8N205 404 aa21.49■■□□□ 1.03
CD99-211ENST00000623253 HACL1Q9UJ83 578 aa21.49■■□□□ 1.03
CD99-211ENST00000623253 NUTM1Q86Y26 1132 aa21.48■■□□□ 1.03
CD99-211ENST00000623253 RRP7AQ9Y3A4 280 aaKnown RBP21.48■■□□□ 1.03
CD99-211ENST00000623253 IARSP41252 1262 aaKnown RBP21.47■■□□□ 1.03
CD99-211ENST00000623253 PASKQ96RG2 1323 aa21.47■■□□□ 1.03
CD99-211ENST00000623253 EPHX2P34913 555 aa21.46■■□□□ 1.03
CD99-211ENST00000623253 PNISRQ8TF01 805 aaKnown RBP21.46■■□□□ 1.03
CD99-211ENST00000623253 NYXQ9GZU5 481 aa21.46■■□□□ 1.03
CD99-211ENST00000623253 TMEM88BA6NKF7 163 aa21.45■■□□□ 1.02
CD99-211ENST00000623253 MYL6BP14649 208 aa21.45■■□□□ 1.02
CD99-211ENST00000623253 KIF6Q6ZMV9 814 aa21.45■■□□□ 1.02
CD99-211ENST00000623253 JDP2Q8WYK2 163 aa21.45■■□□□ 1.02
CD99-211ENST00000623253 RPGRQ92834 1020 aaKnown RBP21.45■■□□□ 1.02
CD99-211ENST00000623253 RNF123Q5XPI4 1314 aa21.45■■□□□ 1.02
CD99-211ENST00000623253 CNTNAP1P78357 1384 aa21.45■■□□□ 1.02
CD99-211ENST00000623253 ITGBL1O95965 494 aaPredicted RBP21.44■■□□□ 1.02
CD99-211ENST00000623253 GPTP24298 496 aa21.44■■□□□ 1.02
CD99-211ENST00000623253 PNMA8AQ86V59 439 aaPredicted RBP21.44■■□□□ 1.02
CD99-211ENST00000623253 SCN4AP35499 1836 aa21.43■■□□□ 1.02
CD99-211ENST00000623253 ERVV-1B6SEH8 477 aa21.43■■□□□ 1.02
CD99-211ENST00000623253 FZD9O00144 591 aa21.43■■□□□ 1.02
CD99-211ENST00000623253 MAP1SQ66K74 1059 aaPredicted RBP21.43■■□□□ 1.02
CD99-211ENST00000623253 TTLL7Q6ZT98 887 aa21.43■■□□□ 1.02
CD99-211ENST00000623253 THUMPD2Q9BTF0 503 aaKnown RBP21.43■■□□□ 1.02
CD99-211ENST00000623253 ZBTB3Q9H5J0 574 aa21.43■■□□□ 1.02
CD99-211ENST00000623253 GJA3Q9Y6H8 435 aa21.43■■□□□ 1.02
CD99-211ENST00000623253 MAP3K15Q6ZN16 1313 aa21.43■■□□□ 1.02
CD99-211ENST00000623253 ABCC12Q96J65 1359 aa21.43■■□□□ 1.02
CD99-211ENST00000623253 TCERG1O14776 1098 aaKnown RBP21.42■■□□□ 1.02
CD99-211ENST00000623253 FOXN1O15353 648 aa21.42■■□□□ 1.02
CD99-211ENST00000623253 VEGFBP49765 207 aa21.42■■□□□ 1.02
CD99-211ENST00000623253 EIF4A1P60842 406 aaKnown RBP21.42■■□□□ 1.02
CD99-211ENST00000623253 CRY2Q49AN0 593 aa21.42■■□□□ 1.02
CD99-211ENST00000623253 GPC2Q8N158 579 aa21.42■■□□□ 1.02
CD99-211ENST00000623253 AIDAQ96BJ3 306 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms