RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 TAF7Q15545 349 aaPredicted RBP15.56■□□□□ 0.08
CHD1L-210ENST00000622533 ATP6V1DQ9Y5K8 247 aa15.56■□□□□ 0.08
CHD1L-210ENST00000622533 HSP90AB4PQ58FF6 505 aa15.56■□□□□ 0.08
CHD1L-210ENST00000622533 USP44Q9H0E7 712 aa15.56■□□□□ 0.08
CHD1L-210ENST00000622533 RAD50Q92878 1312 aa15.55■□□□□ 0.08
CHD1L-210ENST00000622533 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.55■□□□□ 0.08
CHD1L-210ENST00000622533 SLFN14P0C7P3 912 aa15.55■□□□□ 0.08
CHD1L-210ENST00000622533 KCNJ4P48050 445 aa15.55■□□□□ 0.08
CHD1L-210ENST00000622533 TAF3Q5VWG9 929 aa15.55■□□□□ 0.08
CHD1L-210ENST00000622533 CNTROBQ8N137 903 aa15.55■□□□□ 0.08
CHD1L-210ENST00000622533 NGDNQ8NEJ9 315 aaKnown RBP15.55■□□□□ 0.08
CHD1L-210ENST00000622533 KIF1BPQ96EK5 621 aa15.55■□□□□ 0.08
CHD1L-210ENST00000622533 NUTM2FA1L443 756 aa15.54■□□□□ 0.08
CHD1L-210ENST00000622533 LRMPQ12912 555 aa15.54■□□□□ 0.08
CHD1L-210ENST00000622533 POLA2Q14181 598 aa15.54■□□□□ 0.08
CHD1L-210ENST00000622533 PLCD3Q8N3E9 789 aa15.54■□□□□ 0.08
CHD1L-210ENST00000622533 SGSM2O43147 1006 aa15.54■□□□□ 0.08
CHD1L-210ENST00000622533 FUCA2Q9BTY2 467 aa15.54■□□□□ 0.08
CHD1L-210ENST00000622533 UNC5CLQ8IV45 518 aa15.53■□□□□ 0.08
CHD1L-210ENST00000622533 RPAP1Q9BWH6 1393 aaPredicted RBP15.53■□□□□ 0.08
CHD1L-210ENST00000622533 UBE2HP62256 183 aa15.53■□□□□ 0.08
CHD1L-210ENST00000622533 RHPN1Q8TCX5 695 aa15.53■□□□□ 0.08
CHD1L-210ENST00000622533 SURF6O75683 361 aaKnown RBP15.52■□□□□ 0.08
CHD1L-210ENST00000622533 HOXB7P09629 217 aa15.52■□□□□ 0.08
CHD1L-210ENST00000622533 HDGFL1Q5TGJ6 251 aa15.52■□□□□ 0.08
CHD1L-210ENST00000622533 LIMCH1Q9UPQ0 1083 aa15.52■□□□□ 0.08
CHD1L-210ENST00000622533 CHMP3Q9Y3E7 222 aa15.52■□□□□ 0.08
CHD1L-210ENST00000622533 EID1Q9Y6B2 187 aa15.52■□□□□ 0.08
CHD1L-210ENST00000622533 ZSCAN22P10073 491 aaPredicted RBP15.52■□□□□ 0.07
CHD1L-210ENST00000622533 CDK11BP21127 795 aaKnown RBP15.52■□□□□ 0.07
CHD1L-210ENST00000622533 IRX5P78411 483 aaPredicted RBP15.52■□□□□ 0.07
CHD1L-210ENST00000622533 PI4K2BQ8TCG2 481 aa15.52■□□□□ 0.07
CHD1L-210ENST00000622533 DDX41Q9UJV9 622 aaKnown RBP15.52■□□□□ 0.07
CHD1L-210ENST00000622533 PIK3C2AO00443 1686 aa15.52■□□□□ 0.07
CHD1L-210ENST00000622533 GABPB1Q06547 395 aaPredicted RBP15.51■□□□□ 0.07
CHD1L-210ENST00000622533 PPP1R42Q7Z4L9 355 aa15.51■□□□□ 0.07
CHD1L-210ENST00000622533 RUFY2Q8WXA3 655 aa15.51■□□□□ 0.07
CHD1L-210ENST00000622533 NRBP1Q9UHY1 535 aa15.51■□□□□ 0.07
CHD1L-210ENST00000622533 TTC41PQ6P2S7 1318 aa15.51■□□□□ 0.07
CHD1L-210ENST00000622533 USP42Q9H9J4 1324 aaKnown RBP15.51■□□□□ 0.07
CHD1L-210ENST00000622533 ERICH4A6NGS2 130 aa15.51■□□□□ 0.07
CHD1L-210ENST00000622533 PDIA4P13667 645 aaKnown RBP15.51■□□□□ 0.07
CHD1L-210ENST00000622533 CCDC186Q7Z3E2 898 aa15.51■□□□□ 0.07
CHD1L-210ENST00000622533 TTC14Q96N46 770 aa15.51■□□□□ 0.07
CHD1L-210ENST00000622533 IL1RAPL2Q9NP60 686 aa15.51■□□□□ 0.07
CHD1L-210ENST00000622533 GOLGA6L6A8MZA4 724 aa15.5■□□□□ 0.07
CHD1L-210ENST00000622533 IL17REQ8NFR9 667 aa15.5■□□□□ 0.07
CHD1L-210ENST00000622533 SNX14Q9Y5W7 946 aa15.5■□□□□ 0.07
CHD1L-210ENST00000622533 ANKARQ7Z5J8 1434 aa15.5■□□□□ 0.07
CHD1L-210ENST00000622533 USP54Q70EL1 1684 aa15.5■□□□□ 0.07
CHD1L-210ENST00000622533 DIP2AQ14689 1571 aa15.5■□□□□ 0.07
CHD1L-210ENST00000622533 TNNT1P13805 278 aa15.5■□□□□ 0.07
CHD1L-210ENST00000622533 HOXC9P31274 260 aa15.5■□□□□ 0.07
CHD1L-210ENST00000622533 NUTM1Q86Y26 1132 aa15.5■□□□□ 0.07
CHD1L-210ENST00000622533 DRC7Q8IY82 874 aa15.5■□□□□ 0.07
CHD1L-210ENST00000622533 ZNF592Q92610 1267 aa15.5■□□□□ 0.07
CHD1L-210ENST00000622533 NECTIN2Q92692 538 aa15.5■□□□□ 0.07
CHD1L-210ENST00000622533 LSG1Q9H089 658 aaKnown RBP15.5■□□□□ 0.07
CHD1L-210ENST00000622533 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.5■□□□□ 0.07
CHD1L-210ENST00000622533 V9GYY5 206 aaPredicted RBP15.5■□□□□ 0.07
CHD1L-210ENST00000622533 STX6O43752 255 aa15.5■□□□□ 0.07
CHD1L-210ENST00000622533 IL25Q9H293 177 aa15.5■□□□□ 0.07
CHD1L-210ENST00000622533 LTKP29376 864 aa15.49■□□□□ 0.07
CHD1L-210ENST00000622533 SMC3Q9UQE7 1217 aa15.49■□□□□ 0.07
CHD1L-210ENST00000622533 HDAC5Q9UQL6 1122 aa15.49■□□□□ 0.07
CHD1L-210ENST00000622533 AMOTL2Q9Y2J4 779 aa15.49■□□□□ 0.07
CHD1L-210ENST00000622533 TBX22Q9Y458 520 aa15.49■□□□□ 0.07
CHD1L-210ENST00000622533 NWD1Q149M9 1564 aa15.49■□□□□ 0.07
CHD1L-210ENST00000622533 SRGAP3O43295 1099 aa15.49■□□□□ 0.07
CHD1L-210ENST00000622533 GLRX3O76003 335 aaKnown RBP15.49■□□□□ 0.07
CHD1L-210ENST00000622533 TPM3P06753 285 aa15.49■□□□□ 0.07
CHD1L-210ENST00000622533 SYT1P21579 422 aa15.49■□□□□ 0.07
CHD1L-210ENST00000622533 NLRP6P59044 892 aa15.49■□□□□ 0.07
CHD1L-210ENST00000622533 LUZP1Q86V48 1076 aa15.49■□□□□ 0.07
CHD1L-210ENST00000622533 KIF18AQ8NI77 898 aa15.49■□□□□ 0.07
CHD1L-210ENST00000622533 ZSCAN31Q96LW9 406 aaPredicted RBP15.49■□□□□ 0.07
CHD1L-210ENST00000622533 SMTNL1A8MU46 457 aa15.48■□□□□ 0.07
CHD1L-210ENST00000622533 DNM1Q05193 864 aaKnown RBP15.48■□□□□ 0.07
CHD1L-210ENST00000622533 TERF2Q15554 542 aa15.48■□□□□ 0.07
CHD1L-210ENST00000622533 CAMK4Q16566 473 aa15.48■□□□□ 0.07
CHD1L-210ENST00000622533 SH2B1Q9NRF2 756 aaPredicted RBP15.48■□□□□ 0.07
CHD1L-210ENST00000622533 CRYBG1Q9Y4K1 1723 aa15.48■□□□□ 0.07
CHD1L-210ENST00000622533 F13A1P00488 732 aa15.47■□□□□ 0.07
CHD1L-210ENST00000622533 AK2P54819 239 aa15.47■□□□□ 0.07
CHD1L-210ENST00000622533 GPATCH3Q96I76 525 aa15.47■□□□□ 0.07
CHD1L-210ENST00000622533 ST7Q9NRC1 585 aa15.47■□□□□ 0.07
CHD1L-210ENST00000622533 MORC2Q9Y6X9 1032 aaPredicted RBP15.47■□□□□ 0.07
CHD1L-210ENST00000622533 CCDC112Q8NEF3 446 aa15.47■□□□□ 0.07
CHD1L-210ENST00000622533 TM6SF1Q9BZW5 370 aa15.47■□□□□ 0.07
CHD1L-210ENST00000622533 TRERF1Q96PN7 1200 aa15.47■□□□□ 0.07
CHD1L-210ENST00000622533 CEMIPQ8WUJ3 1361 aa15.46■□□□□ 0.07
CHD1L-210ENST00000622533 VPS53Q5VIR6 699 aa15.46■□□□□ 0.07
CHD1L-210ENST00000622533 IPO4Q8TEX9 1081 aaKnown RBP15.46■□□□□ 0.07
CHD1L-210ENST00000622533 DNAAF4Q8WXU2 420 aa15.46■□□□□ 0.07
CHD1L-210ENST00000622533 CCDC192P0DO97 292 aa15.46■□□□□ 0.06
CHD1L-210ENST00000622533 PHAXQ9H814 394 aaKnown RBP15.46■□□□□ 0.06
CHD1L-210ENST00000622533 TPD52L1Q16890 204 aaPredicted RBP15.45■□□□□ 0.06
CHD1L-210ENST00000622533 RUFY3Q7L099 469 aa15.45■□□□□ 0.06
CHD1L-210ENST00000622533 ERC1Q8IUD2 1116 aa15.45■□□□□ 0.06
CHD1L-210ENST00000622533 SLIT1O75093 1534 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms