RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 IGHA2P01877 340 aa8.18□□□□□ -1.1
CPNE3-213ENST00000622183 BMP2P12643 396 aa8.18□□□□□ -1.1
CPNE3-213ENST00000622183 MZF1P28698 734 aaPredicted RBP8.18□□□□□ -1.1
CPNE3-213ENST00000622183 ZAP70P43403 619 aa8.18□□□□□ -1.1
CPNE3-213ENST00000622183 EAPPQ56P03 285 aaPredicted RBP8.18□□□□□ -1.1
CPNE3-213ENST00000622183 WDR44Q5JSH3 913 aa8.18□□□□□ -1.1
CPNE3-213ENST00000622183 RNF217Q8TC41 542 aa8.18□□□□□ -1.1
CPNE3-213ENST00000622183 MRRFQ96E11 262 aaKnown RBP8.18□□□□□ -1.1
CPNE3-213ENST00000622183 DMRTB1Q96MA1 342 aa8.18□□□□□ -1.1
CPNE3-213ENST00000622183 P4HBP07237 508 aaKnown RBP8.17□□□□□ -1.1
CPNE3-213ENST00000622183 USP5P45974 858 aa8.17□□□□□ -1.1
CPNE3-213ENST00000622183 FMR1Q06787 632 aaKnown RBP eCLIP8.17□□□□□ -1.1
CPNE3-213ENST00000622183 DSC3Q14574 896 aa8.17□□□□□ -1.1
CPNE3-213ENST00000622183 HIF1AQ16665 826 aa8.17□□□□□ -1.1
CPNE3-213ENST00000622183 MRPL14Q6P1L8 145 aaKnown RBP8.17□□□□□ -1.1
CPNE3-213ENST00000622183 NBPF10Q6P3W6 841 aaKnown RBP8.17□□□□□ -1.1
CPNE3-213ENST00000622183 GJD3Q8N144 294 aa8.17□□□□□ -1.1
CPNE3-213ENST00000622183 TMC1Q8TDI8 760 aa8.17□□□□□ -1.1
CPNE3-213ENST00000622183 TGFBR3LH3BV60 316 aa8.16□□□□□ -1.1
CPNE3-213ENST00000622183 AVPP01185 164 aa8.16□□□□□ -1.1
CPNE3-213ENST00000622183 TATP17735 454 aaPredicted RBP8.16□□□□□ -1.1
CPNE3-213ENST00000622183 C6orf118Q5T5N4 469 aa8.16□□□□□ -1.1
CPNE3-213ENST00000622183 TREML1Q86YW5 311 aa8.16□□□□□ -1.1
CPNE3-213ENST00000622183 RHPN1Q8TCX5 695 aa8.16□□□□□ -1.1
CPNE3-213ENST00000622183 AIDAQ96BJ3 306 aa8.16□□□□□ -1.1
CPNE3-213ENST00000622183 BCS1LQ9Y276 419 aa8.16□□□□□ -1.1
CPNE3-213ENST00000622183 GPR182O15218 404 aa8.15□□□□□ -1.1
CPNE3-213ENST00000622183 PDGFAP04085 211 aa8.15□□□□□ -1.1
CPNE3-213ENST00000622183 PHKA2P46019 1235 aa8.15□□□□□ -1.1
CPNE3-213ENST00000622183 TAGLNQ01995 201 aaKnown RBP8.15□□□□□ -1.1
CPNE3-213ENST00000622183 DNM1Q05193 864 aaKnown RBP8.15□□□□□ -1.1
CPNE3-213ENST00000622183 POU4F2Q12837 409 aa8.15□□□□□ -1.1
CPNE3-213ENST00000622183 IER5Q5VY09 327 aa8.15□□□□□ -1.1
CPNE3-213ENST00000622183 LYSMD3Q7Z3D4 306 aa8.15□□□□□ -1.1
CPNE3-213ENST00000622183 EDEM1Q92611 657 aa8.15□□□□□ -1.1
CPNE3-213ENST00000622183 ALKBH8Q96BT7 664 aaKnown RBP8.15□□□□□ -1.1
CPNE3-213ENST00000622183 POLIQ9UNA4 740 aa8.15□□□□□ -1.1
CPNE3-213ENST00000622183 FAM187AA6NFU0 413 aa8.14□□□□□ -1.11
CPNE3-213ENST00000622183 ATP4AP20648 1035 aa8.14□□□□□ -1.11
CPNE3-213ENST00000622183 VAMP1P23763 118 aa8.14□□□□□ -1.11
CPNE3-213ENST00000622183 PLCB3Q01970 1234 aa8.14□□□□□ -1.11
CPNE3-213ENST00000622183 EHHADHQ08426 723 aa8.14□□□□□ -1.11
CPNE3-213ENST00000622183 SCARF1Q14162 830 aa8.14□□□□□ -1.11
CPNE3-213ENST00000622183 PRICKLE2Q7Z3G6 844 aa8.14□□□□□ -1.11
CPNE3-213ENST00000622183 TTLL8A6PVC2 850 aa8.13□□□□□ -1.11
CPNE3-213ENST00000622183 MICAL2O94851 1124 aa8.13□□□□□ -1.11
CPNE3-213ENST00000622183 PCSK2P16519 638 aa8.13□□□□□ -1.11
CPNE3-213ENST00000622183 SUSD3Q96L08 255 aa8.13□□□□□ -1.11
CPNE3-213ENST00000622183 IGSF5Q9NSI5 407 aa8.13□□□□□ -1.11
CPNE3-213ENST00000622183 FAM13BQ9NYF5 915 aa8.13□□□□□ -1.11
CPNE3-213ENST00000622183 DMGDHQ9UI17 866 aaKnown RBP8.13□□□□□ -1.11
CPNE3-213ENST00000622183 A0A1B0GTH6 734 aa8.12□□□□□ -1.11
CPNE3-213ENST00000622183 SMCPP49901 116 aaPredicted RBP8.12□□□□□ -1.11
CPNE3-213ENST00000622183 FGD1P98174 961 aa8.12□□□□□ -1.11
CPNE3-213ENST00000622183 CTC1Q2NKJ3 1217 aa8.12□□□□□ -1.11
CPNE3-213ENST00000622183 GPR152Q8TDT2 470 aa8.12□□□□□ -1.11
CPNE3-213ENST00000622183 KLRG1Q96E93 195 aa8.12□□□□□ -1.11
CPNE3-213ENST00000622183 BCL11AQ9H165 835 aa8.12□□□□□ -1.11
CPNE3-213ENST00000622183 ANKIB1Q9P2G1 1089 aa8.12□□□□□ -1.11
CPNE3-213ENST00000622183 SOS2Q07890 1332 aaPredicted RBP8.11□□□□□ -1.11
CPNE3-213ENST00000622183 RPLP1P05386 114 aaKnown RBP8.11□□□□□ -1.11
CPNE3-213ENST00000622183 BICDL1Q6ZP65 573 aa8.11□□□□□ -1.11
CPNE3-213ENST00000622183 ZNF280CQ8ND82 737 aa8.11□□□□□ -1.11
CPNE3-213ENST00000622183 PIK3R5Q8WYR1 880 aa8.11□□□□□ -1.11
CPNE3-213ENST00000622183 NUDT16Q96DE0 195 aaKnown RBP8.11□□□□□ -1.11
CPNE3-213ENST00000622183 HSH2DQ96JZ2 352 aa8.11□□□□□ -1.11
CPNE3-213ENST00000622183 TIMMDC1Q9NPL8 285 aa8.11□□□□□ -1.11
CPNE3-213ENST00000622183 OPLAHO14841 1288 aa8.1□□□□□ -1.11
CPNE3-213ENST00000622183 PRPF40AO75400 957 aaKnown RBP8.1□□□□□ -1.11
CPNE3-213ENST00000622183 LDHBP07195 334 aaKnown RBP8.1□□□□□ -1.11
CPNE3-213ENST00000622183 BMP1P13497 986 aa8.1□□□□□ -1.11
CPNE3-213ENST00000622183 RHOQP17081 205 aa8.1□□□□□ -1.11
CPNE3-213ENST00000622183 MSX1P28360 303 aa8.1□□□□□ -1.11
CPNE3-213ENST00000622183 MAPK8P45983 427 aa8.1□□□□□ -1.11
CPNE3-213ENST00000622183 IDH3AP50213 366 aa8.1□□□□□ -1.11
CPNE3-213ENST00000622183 TRIM46Q7Z4K8 759 aa8.1□□□□□ -1.11
CPNE3-213ENST00000622183 ZIC5Q96T25 663 aa8.1□□□□□ -1.11
CPNE3-213ENST00000622183 DGAT1O75907 488 aa8.09□□□□□ -1.11
CPNE3-213ENST00000622183 ENOX2Q16206 610 aaKnown RBP8.09□□□□□ -1.11
CPNE3-213ENST00000622183 ARSJQ5FYB0 599 aaPredicted RBP8.09□□□□□ -1.11
CPNE3-213ENST00000622183 NIF3L1Q9GZT8 377 aa8.09□□□□□ -1.11
CPNE3-213ENST00000622183 INPP5BP32019 993 aa8.08□□□□□ -1.12
CPNE3-213ENST00000622183 ARSDP51689 593 aa8.08□□□□□ -1.12
CPNE3-213ENST00000622183 BTLAQ7Z6A9 289 aa8.08□□□□□ -1.12
CPNE3-213ENST00000622183 CRIPAKQ8N1N5 446 aa8.08□□□□□ -1.12
CPNE3-213ENST00000622183 TTC16Q8NEE8 873 aa8.08□□□□□ -1.12
CPNE3-213ENST00000622183 GGNBP2Q9H3C7 697 aa8.08□□□□□ -1.12
CPNE3-213ENST00000622183 NEUROD4Q9HD90 331 aa8.08□□□□□ -1.12
CPNE3-213ENST00000622183 A0A1W2PNR3 127 aa8.07□□□□□ -1.12
CPNE3-213ENST00000622183 FIGNL2A6NMB9 653 aa8.07□□□□□ -1.12
CPNE3-213ENST00000622183 ATP2B2Q01814 1243 aa8.07□□□□□ -1.12
CPNE3-213ENST00000622183 C8orf34Q49A92 452 aa8.07□□□□□ -1.12
CPNE3-213ENST00000622183 PKDCCQ504Y2 493 aa8.07□□□□□ -1.12
CPNE3-213ENST00000622183 LRRC69Q6ZNQ3 347 aa8.07□□□□□ -1.12
CPNE3-213ENST00000622183 ZFP42Q96MM3 310 aa8.07□□□□□ -1.12
CPNE3-213ENST00000622183 CRISPLD1Q9H336 500 aa8.07□□□□□ -1.12
CPNE3-213ENST00000622183 DYRK1BQ9Y463 629 aa8.07□□□□□ -1.12
CPNE3-213ENST00000622183 PNMA6FA0A0J9YX94 578 aa8.06□□□□□ -1.12
CPNE3-213ENST00000622183 NEFLP07196 543 aa8.06□□□□□ -1.12
CPNE3-213ENST00000622183 MRPL58Q14197 206 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms