RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 GPTP24298 496 aa15.72■□□□□ 0.11
SIRPA-204ENST00000622179 CADPS2Q86UW7 1296 aa15.72■□□□□ 0.11
SIRPA-204ENST00000622179 NUTM2AQ8IVF1 878 aaPredicted RBP15.72■□□□□ 0.11
SIRPA-204ENST00000622179 ME1P48163 572 aa15.72■□□□□ 0.11
SIRPA-204ENST00000622179 CDK11BP21127 795 aaKnown RBP15.72■□□□□ 0.11
SIRPA-204ENST00000622179 LAMC1P11047 1609 aa15.72■□□□□ 0.11
SIRPA-204ENST00000622179 CPA1P15085 419 aa15.72■□□□□ 0.11
SIRPA-204ENST00000622179 ZSCAN23Q3MJ62 389 aa15.72■□□□□ 0.11
SIRPA-204ENST00000622179 C19orf44Q9H6X5 657 aa15.72■□□□□ 0.11
SIRPA-204ENST00000622179 SH2B1Q9NRF2 756 aaPredicted RBP15.72■□□□□ 0.11
SIRPA-204ENST00000622179 TFIP11Q9UBB9 837 aaKnown RBP15.72■□□□□ 0.11
SIRPA-204ENST00000622179 KAT6BQ8WYB5 2073 aa15.71■□□□□ 0.11
SIRPA-204ENST00000622179 STARD3NLO95772 234 aa15.71■□□□□ 0.11
SIRPA-204ENST00000622179 METTL24Q5JXM2 366 aa15.71■□□□□ 0.11
SIRPA-204ENST00000622179 DDX17Q92841 729 aaKnown RBP15.71■□□□□ 0.11
SIRPA-204ENST00000622179 DTNBO60941 627 aa15.71■□□□□ 0.11
SIRPA-204ENST00000622179 MPHOSPH8Q99549 860 aa15.71■□□□□ 0.11
SIRPA-204ENST00000622179 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.71■□□□□ 0.11
SIRPA-204ENST00000622179 USP44Q9H0E7 712 aa15.71■□□□□ 0.11
SIRPA-204ENST00000622179 ANAPC15P60006 121 aa15.71■□□□□ 0.1
SIRPA-204ENST00000622179 KLHDC4Q8TBB5 520 aa15.71■□□□□ 0.1
SIRPA-204ENST00000622179 ARHGEF10O15013 1369 aa15.7■□□□□ 0.1
SIRPA-204ENST00000622179 STK38Q15208 465 aa15.7■□□□□ 0.1
SIRPA-204ENST00000622179 LMBR1LQ6UX01 489 aa15.7■□□□□ 0.1
SIRPA-204ENST00000622179 RBM8AQ9Y5S9 174 aaKnown RBP15.7■□□□□ 0.1
SIRPA-204ENST00000622179 SAFBQ15424 915 aaKnown RBP eCLIP15.7■□□□□ 0.1
SIRPA-204ENST00000622179 BICC1Q9H694 974 aaKnown RBP15.7■□□□□ 0.1
SIRPA-204ENST00000622179 QRICH2Q9H0J4 1663 aa15.69■□□□□ 0.1
SIRPA-204ENST00000622179 DHX16O60231 1041 aaKnown RBP15.69■□□□□ 0.1
SIRPA-204ENST00000622179 BRPF1P55201 1214 aaPredicted RBP15.69■□□□□ 0.1
SIRPA-204ENST00000622179 EIF4A1P60842 406 aaKnown RBP15.69■□□□□ 0.1
SIRPA-204ENST00000622179 GUCY1B3Q02153 619 aa15.69■□□□□ 0.1
SIRPA-204ENST00000622179 NUP62CLQ9H1M0 184 aa15.69■□□□□ 0.1
SIRPA-204ENST00000622179 A2ML1A8K2U0 1454 aa15.69■□□□□ 0.1
SIRPA-204ENST00000622179 ZSCAN30Q86W11 494 aa15.69■□□□□ 0.1
SIRPA-204ENST00000622179 CWC25Q9NXE8 425 aaPredicted RBP15.69■□□□□ 0.1
SIRPA-204ENST00000622179 INO80Q9ULG1 1556 aaPredicted RBP15.69■□□□□ 0.1
SIRPA-204ENST00000622179 TULP4Q9NRJ4 1543 aa15.69■□□□□ 0.1
SIRPA-204ENST00000622179 CCT2P78371 535 aaKnown RBP15.68■□□□□ 0.1
SIRPA-204ENST00000622179 LRRC2Q9BYS8 371 aa15.68■□□□□ 0.1
SIRPA-204ENST00000622179 HSPA2P54652 639 aa15.68■□□□□ 0.1
SIRPA-204ENST00000622179 IFIT5Q13325 482 aaKnown RBP15.68■□□□□ 0.1
SIRPA-204ENST00000622179 MTMR7Q9Y216 660 aa15.68■□□□□ 0.1
SIRPA-204ENST00000622179 ZNF396Q96N95 335 aaPredicted RBP15.68■□□□□ 0.1
SIRPA-204ENST00000622179 DDX21Q9NR30 783 aaKnown RBP eCLIP15.68■□□□□ 0.1
SIRPA-204ENST00000622179 USP6P35125 1406 aa15.67■□□□□ 0.1
SIRPA-204ENST00000622179 PES1O00541 588 aaKnown RBP15.67■□□□□ 0.1
SIRPA-204ENST00000622179 AK2P54819 239 aa15.67■□□□□ 0.1
SIRPA-204ENST00000622179 NMIQ13287 307 aaPredicted RBP15.67■□□□□ 0.1
SIRPA-204ENST00000622179 U3KPZ7 1027 aaPredicted RBP15.67■□□□□ 0.1
SIRPA-204ENST00000622179 CD2BP2O95400 341 aaKnown RBP15.67■□□□□ 0.1
SIRPA-204ENST00000622179 CTNNA3Q9UI47 895 aa15.67■□□□□ 0.1
SIRPA-204ENST00000622179 NPHP3Q7Z494 1330 aa15.67■□□□□ 0.1
SIRPA-204ENST00000622179 G3V3G9 751 aa15.67■□□□□ 0.1
SIRPA-204ENST00000622179 DCAF8Q5TAQ9 597 aa15.67■□□□□ 0.1
SIRPA-204ENST00000622179 ZNF790Q6PG37 636 aa15.67■□□□□ 0.1
SIRPA-204ENST00000622179 ZCRB1Q8TBF4 217 aaKnown RBP15.67■□□□□ 0.1
SIRPA-204ENST00000622179 CNPY2Q9Y2B0 182 aa15.67■□□□□ 0.1
SIRPA-204ENST00000622179 ALKQ9UM73 1620 aa15.66■□□□□ 0.1
SIRPA-204ENST00000622179 CCDC183Q5T5S1 534 aa15.66■□□□□ 0.1
SIRPA-204ENST00000622179 LMTK2Q8IWU2 1503 aa15.66■□□□□ 0.1
SIRPA-204ENST00000622179 TPD52L1Q16890 204 aaPredicted RBP15.66■□□□□ 0.1
SIRPA-204ENST00000622179 IMMTQ16891 758 aaKnown RBP15.66■□□□□ 0.1
SIRPA-204ENST00000622179 BABAM1Q9NWV8 329 aa15.66■□□□□ 0.1
SIRPA-204ENST00000622179 USP25Q9UHP3 1055 aa15.66■□□□□ 0.1
SIRPA-204ENST00000622179 PLEKHG1Q9ULL1 1385 aa15.66■□□□□ 0.1
SIRPA-204ENST00000622179 HAND2P61296 217 aa15.66■□□□□ 0.1
SIRPA-204ENST00000622179 USP48Q86UV5 1035 aa15.66■□□□□ 0.1
SIRPA-204ENST00000622179 CKAP2LQ8IYA6 745 aa15.66■□□□□ 0.1
SIRPA-204ENST00000622179 TRMT112Q9UI30 125 aaKnown RBP15.66■□□□□ 0.1
SIRPA-204ENST00000622179 CFAP45Q9UL16 551 aa15.66■□□□□ 0.1
SIRPA-204ENST00000622179 SETBP1Q9Y6X0 1596 aa15.65■□□□□ 0.1
SIRPA-204ENST00000622179 ZSCAN22P10073 491 aaPredicted RBP15.65■□□□□ 0.1
SIRPA-204ENST00000622179 PRIM1P49642 420 aaKnown RBP15.65■□□□□ 0.1
SIRPA-204ENST00000622179 RBM10P98175 930 aaKnown RBP15.65■□□□□ 0.1
SIRPA-204ENST00000622179 SART3Q15020 963 aaKnown RBP15.65■□□□□ 0.1
SIRPA-204ENST00000622179 NEK1Q96PY6 1258 aa15.65■□□□□ 0.1
SIRPA-204ENST00000622179 AKAP2Q9Y2D5 859 aa15.65■□□□□ 0.1
SIRPA-204ENST00000622179 TTC41PQ6P2S7 1318 aa15.65■□□□□ 0.1
SIRPA-204ENST00000622179 MAP3K11Q16584 847 aa15.65■□□□□ 0.1
SIRPA-204ENST00000622179 BICDL1Q6ZP65 573 aa15.64■□□□□ 0.09
SIRPA-204ENST00000622179 IGSF1Q8N6C5 1336 aa15.64■□□□□ 0.09
SIRPA-204ENST00000622179 KIF24Q5T7B8 1368 aa15.64■□□□□ 0.09
SIRPA-204ENST00000622179 ADAMTS2O95450 1211 aa15.64■□□□□ 0.09
SIRPA-204ENST00000622179 LDHAL6AQ6ZMR3 332 aa15.64■□□□□ 0.09
SIRPA-204ENST00000622179 KIDINS220Q9ULH0 1771 aa15.64■□□□□ 0.09
SIRPA-204ENST00000622179 BRF1Q92994 677 aa15.64■□□□□ 0.09
SIRPA-204ENST00000622179 NAT10Q9H0A0 1025 aaKnown RBP15.64■□□□□ 0.09
SIRPA-204ENST00000622179 TMX4Q9H1E5 349 aaPredicted RBP15.64■□□□□ 0.09
SIRPA-204ENST00000622179 RAB11FIP4Q86YS3 637 aa15.63■□□□□ 0.09
SIRPA-204ENST00000622179 CDK12Q9NYV4 1490 aaPredicted RBP15.63■□□□□ 0.09
SIRPA-204ENST00000622179 PNPLA6Q8IY17 1366 aa15.63■□□□□ 0.09
SIRPA-204ENST00000622179 TFCP2Q12800 502 aa15.63■□□□□ 0.09
SIRPA-204ENST00000622179 SCAND2PQ9GZW5 306 aaPredicted RBP15.63■□□□□ 0.09
SIRPA-204ENST00000622179 ZSCAN25Q6NSZ9 544 aa15.63■□□□□ 0.09
SIRPA-204ENST00000622179 ABCF2Q9UG63 623 aa15.63■□□□□ 0.09
SIRPA-204ENST00000622179 HOXB7P09629 217 aa15.63■□□□□ 0.09
SIRPA-204ENST00000622179 PKP1Q13835 747 aa15.63■□□□□ 0.09
SIRPA-204ENST00000622179 NUP133Q8WUM0 1156 aa15.63■□□□□ 0.09
SIRPA-204ENST00000622179 AIDAQ96BJ3 306 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms