RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 DBF4Q9UBU7 674 aaPredicted RBP23.63■■□□□ 1.37
LITAF-220ENST00000620789 ZNF652Q9Y2D9 606 aa23.63■■□□□ 1.37
LITAF-220ENST00000620789 CD2APQ9Y5K6 639 aa23.63■■□□□ 1.37
LITAF-220ENST00000620789 CHMP4AQ9BY43 222 aa23.62■■□□□ 1.37
LITAF-220ENST00000620789 MAP3K15Q6ZN16 1313 aa23.61■■□□□ 1.37
LITAF-220ENST00000620789 ERVV-1B6SEH8 477 aa23.61■■□□□ 1.37
LITAF-220ENST00000620789 TWISTNBQ3B726 338 aaPredicted RBP23.61■■□□□ 1.37
LITAF-220ENST00000620789 BICDL1Q6ZP65 573 aa23.61■■□□□ 1.37
LITAF-220ENST00000620789 C10orf71Q711Q0 1435 aa23.6■■□□□ 1.37
LITAF-220ENST00000620789 NRXN2Q9P2S2 1712 aa23.59■■□□□ 1.37
LITAF-220ENST00000620789 KIF13BQ9NQT8 1826 aa23.59■■□□□ 1.37
LITAF-220ENST00000620789 EXOSC9Q06265 439 aaKnown RBP23.59■■□□□ 1.37
LITAF-220ENST00000620789 HLFQ16534 295 aa23.59■■□□□ 1.37
LITAF-220ENST00000620789 CCDC30Q5VVM6 783 aa23.59■■□□□ 1.37
LITAF-220ENST00000620789 COPS6Q7L5N1 327 aa23.59■■□□□ 1.37
LITAF-220ENST00000620789 XAGE3Q8WTP9 111 aa23.59■■□□□ 1.37
LITAF-220ENST00000620789 HYPKQ9NX55 129 aa23.59■■□□□ 1.37
LITAF-220ENST00000620789 CARMIL3Q8ND23 1372 aa23.59■■□□□ 1.37
LITAF-220ENST00000620789 AFDNP55196 1824 aaKnown RBP23.59■■□□□ 1.37
LITAF-220ENST00000620789 E9PSI1 815 aa23.58■■□□□ 1.37
LITAF-220ENST00000620789 SERPINB2P05120 415 aa23.58■■□□□ 1.37
LITAF-220ENST00000620789 NLGN2Q8NFZ4 835 aa23.58■■□□□ 1.37
LITAF-220ENST00000620789 SETDB2Q96T68 719 aa23.58■■□□□ 1.37
LITAF-220ENST00000620789 ZBTB3Q9H5J0 574 aa23.58■■□□□ 1.37
LITAF-220ENST00000620789 NUP98P52948 1817 aa23.57■■□□□ 1.36
LITAF-220ENST00000620789 AIMP1Q12904 312 aaKnown RBP23.57■■□□□ 1.36
LITAF-220ENST00000620789 SLFN5Q08AF3 891 aa23.55■■□□□ 1.36
LITAF-220ENST00000620789 GIGYF2Q6Y7W6 1299 aaKnown RBP23.55■■□□□ 1.36
LITAF-220ENST00000620789 NIP7Q9Y221 180 aaKnown RBP eCLIP23.55■■□□□ 1.36
LITAF-220ENST00000620789 ATP10DQ9P241 1426 aa23.55■■□□□ 1.36
LITAF-220ENST00000620789 VAMP4O75379 141 aa23.54■■□□□ 1.36
LITAF-220ENST00000620789 HNRNPUQ00839 825 aaKnown RBP eCLIP23.53■■□□□ 1.36
LITAF-220ENST00000620789 CDCA7LQ96GN5 454 aa23.53■■□□□ 1.36
LITAF-220ENST00000620789 STK31Q9BXU1 1019 aa23.53■■□□□ 1.36
LITAF-220ENST00000620789 KIAA1551Q9HCM1 1747 aa23.53■■□□□ 1.36
LITAF-220ENST00000620789 PHAXQ9H814 394 aaKnown RBP23.52■■□□□ 1.36
LITAF-220ENST00000620789 PXDNLA1KZ92 1463 aa23.51■■□□□ 1.35
LITAF-220ENST00000620789 TGFB2P61812 414 aa23.51■■□□□ 1.35
LITAF-220ENST00000620789 PRR5LQ6MZQ0 368 aa23.51■■□□□ 1.35
LITAF-220ENST00000620789 PLBD2Q8NHP8 589 aa23.51■■□□□ 1.35
LITAF-220ENST00000620789 TCERG1O14776 1098 aaKnown RBP23.5■■□□□ 1.35
LITAF-220ENST00000620789 ANKRD13DQ6ZTN6 518 aa23.5■■□□□ 1.35
LITAF-220ENST00000620789 NBPF5PQ86XG9 351 aaPredicted RBP23.5■■□□□ 1.35
LITAF-220ENST00000620789 ZNF34Q8IZ26 560 aa23.5■■□□□ 1.35
LITAF-220ENST00000620789 CNBD1Q8NA66 436 aa23.5■■□□□ 1.35
LITAF-220ENST00000620789 ANKRD36CQ5JPF3 1778 aa23.5■■□□□ 1.35
LITAF-220ENST00000620789 HSP90AB3PQ58FF7 597 aa23.49■■□□□ 1.35
LITAF-220ENST00000620789 TRMT2AQ8IZ69 625 aaKnown RBP23.49■■□□□ 1.35
LITAF-220ENST00000620789 N4BP2Q86UW6 1770 aaPredicted RBP23.48■■□□□ 1.35
LITAF-220ENST00000620789 NPHP1O15259 732 aa23.48■■□□□ 1.35
LITAF-220ENST00000620789 SLC4A2P04920 1241 aa23.48■■□□□ 1.35
LITAF-220ENST00000620789 GPTP24298 496 aa23.48■■□□□ 1.35
LITAF-220ENST00000620789 UBN2Q6ZU65 1347 aa23.48■■□□□ 1.35
LITAF-220ENST00000620789 ARFGEF2Q9Y6D5 1785 aa23.47■■□□□ 1.35
LITAF-220ENST00000620789 TPTE2Q6XPS3 522 aa23.47■■□□□ 1.35
LITAF-220ENST00000620789 GOLGB1Q14789 3259 aaKnown RBP23.47■■□□□ 1.35
LITAF-220ENST00000620789 A0A0G2JLW4 131 aa23.46■■□□□ 1.35
LITAF-220ENST00000620789 DCAF8L1A6NGE4 600 aa23.46■■□□□ 1.35
LITAF-220ENST00000620789 FAM177BA6PVY3 158 aa23.46■■□□□ 1.35
LITAF-220ENST00000620789 ST5P78524 1137 aa23.46■■□□□ 1.35
LITAF-220ENST00000620789 TCIRG1Q13488 830 aa23.46■■□□□ 1.35
LITAF-220ENST00000620789 PARP10Q53GL7 1025 aa23.46■■□□□ 1.35
LITAF-220ENST00000620789 ANKRD31Q8N7Z5 1873 aa23.46■■□□□ 1.35
LITAF-220ENST00000620789 IBTKQ9P2D0 1353 aaPredicted RBP23.46■■□□□ 1.35
LITAF-220ENST00000620789 CACNA1FO60840 1977 aa23.45■■□□□ 1.35
LITAF-220ENST00000620789 DDX58O95786 925 aaKnown RBP23.45■■□□□ 1.34
LITAF-220ENST00000620789 DPEP1P16444 411 aa23.45■■□□□ 1.34
LITAF-220ENST00000620789 RIC3Q7Z5B4 369 aa23.45■■□□□ 1.34
LITAF-220ENST00000620789 CCDC24Q8N4L8 307 aa23.45■■□□□ 1.34
LITAF-220ENST00000620789 BRIP1Q9BX63 1249 aa23.45■■□□□ 1.34
LITAF-220ENST00000620789 NYXQ9GZU5 481 aa23.45■■□□□ 1.34
LITAF-220ENST00000620789 SUSD4Q5VX71 490 aa23.44■■□□□ 1.34
LITAF-220ENST00000620789 G2E3Q7L622 706 aa23.44■■□□□ 1.34
LITAF-220ENST00000620789 KCNA3P22001 575 aa23.43■■□□□ 1.34
LITAF-220ENST00000620789 CHRNA5P30532 468 aa23.43■■□□□ 1.34
LITAF-220ENST00000620789 ZBED9Q6R2W3 1325 aa23.42■■□□□ 1.34
LITAF-220ENST00000620789 PDE6BP35913 854 aa23.42■■□□□ 1.34
LITAF-220ENST00000620789 FLIIQ13045 1269 aa23.42■■□□□ 1.34
LITAF-220ENST00000620789 GPR162Q16538 588 aa23.42■■□□□ 1.34
LITAF-220ENST00000620789 PPP1R42Q7Z4L9 355 aa23.42■■□□□ 1.34
LITAF-220ENST00000620789 NLRP10Q86W26 655 aa23.42■■□□□ 1.34
LITAF-220ENST00000620789 PELP1Q8IZL8 1130 aaKnown RBP23.42■■□□□ 1.34
LITAF-220ENST00000620789 BRCA1P38398 1863 aaKnown RBP23.42■■□□□ 1.34
LITAF-220ENST00000620789 NTSR2O95665 410 aa23.41■■□□□ 1.34
LITAF-220ENST00000620789 GTF2E1P29083 439 aaPredicted RBP23.41■■□□□ 1.34
LITAF-220ENST00000620789 ISCA1Q9BUE6 129 aa23.41■■□□□ 1.34
LITAF-220ENST00000620789 DLEC1Q9Y238 1755 aa23.41■■□□□ 1.34
LITAF-220ENST00000620789 KSR2Q6VAB6 950 aa23.4■■□□□ 1.34
LITAF-220ENST00000620789 NUTM1Q86Y26 1132 aa23.4■■□□□ 1.34
LITAF-220ENST00000620789 C2CD5Q86YS7 1000 aa23.4■■□□□ 1.34
LITAF-220ENST00000620789 ZNF428Q96B54 188 aa23.4■■□□□ 1.34
LITAF-220ENST00000620789 WWC3Q9ULE0 1092 aa23.4■■□□□ 1.34
LITAF-220ENST00000620789 PDZRN3Q9UPQ7 1066 aa23.4■■□□□ 1.34
LITAF-220ENST00000620789 ADCY9O60503 1353 aa23.4■■□□□ 1.34
LITAF-220ENST00000620789 UTRNP46939 3433 aa23.39■■□□□ 1.34
LITAF-220ENST00000620789 RNF123Q5XPI4 1314 aa23.39■■□□□ 1.34
LITAF-220ENST00000620789 PI4KAP2A4QPH2 592 aa23.39■■□□□ 1.33
LITAF-220ENST00000620789 H0YIN7 160 aa23.39■■□□□ 1.33
LITAF-220ENST00000620789 YBX3P16989 372 aaKnown RBP eCLIP23.39■■□□□ 1.33
LITAF-220ENST00000620789 ERFEQ4G0M1 354 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms