RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 UBASH3AP57075 661 aa5.82□□□□□ -1.48
VPS13D-214ENST00000620676 UBTFL1P0CB47 393 aaPredicted RBP5.82□□□□□ -1.48
VPS13D-214ENST00000620676 ANKRD30AQ9BXX3 1397 aa5.82□□□□□ -1.48
VPS13D-214ENST00000620676 TMCO5BA8MYB1 307 aa5.82□□□□□ -1.48
VPS13D-214ENST00000620676 ACTN3Q08043 901 aaPredicted RBP5.82□□□□□ -1.48
VPS13D-214ENST00000620676 ZNF569Q5MCW4 686 aa5.82□□□□□ -1.48
VPS13D-214ENST00000620676 RANBP1P43487 201 aa5.82□□□□□ -1.48
VPS13D-214ENST00000620676 ZNF710Q8N1W2 664 aa5.82□□□□□ -1.48
VPS13D-214ENST00000620676 PPP1R12CQ9BZL4 782 aa5.82□□□□□ -1.48
VPS13D-214ENST00000620676 AACSQ86V21 672 aa5.82□□□□□ -1.48
VPS13D-214ENST00000620676 GNAI2P04899 355 aa5.82□□□□□ -1.48
VPS13D-214ENST00000620676 SDSP20132 328 aa5.82□□□□□ -1.48
VPS13D-214ENST00000620676 MXRA7P84157 204 aa5.82□□□□□ -1.48
VPS13D-214ENST00000620676 CCDC144CPQ8IYA2 1237 aa5.82□□□□□ -1.48
VPS13D-214ENST00000620676 NEMFO60524 1076 aa5.82□□□□□ -1.48
VPS13D-214ENST00000620676 TXLNAP40222 546 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 SEPT7Q16181 437 aaKnown RBP5.81□□□□□ -1.48
VPS13D-214ENST00000620676 ZSCAN25Q6NSZ9 544 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 CTAGE9A4FU28 777 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 ZNF445P59923 1031 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 ARID5BQ14865 1188 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 EPC1Q9H2F5 836 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 RBM28Q9NW13 759 aaKnown RBP5.81□□□□□ -1.48
VPS13D-214ENST00000620676 NSFL1CQ9UNZ2 370 aaKnown RBP5.81□□□□□ -1.48
VPS13D-214ENST00000620676 STK38LQ9Y2H1 464 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 CNGA1P29973 690 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 EPS15P42566 896 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 SNX21Q969T3 373 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 UTP14AQ9BVJ6 771 aaKnown RBP5.81□□□□□ -1.48
VPS13D-214ENST00000620676 GBP3Q9H0R5 595 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 PRKAR2BP31323 418 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 LIMCH1Q9UPQ0 1083 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 SAFBQ15424 915 aaKnown RBP eCLIP5.81□□□□□ -1.48
VPS13D-214ENST00000620676 PUS7Q96PZ0 661 aaKnown RBP5.81□□□□□ -1.48
VPS13D-214ENST00000620676 PCK1P35558 622 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 NUTM2GQ5VZR2 741 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 FBXO38Q6PIJ6 1188 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 SRCIN1Q9C0H9 1055 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 RAD51AP2Q09MP3 1159 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 TRDNQ13061 729 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 CTAGE15A4D2H0 777 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 CTAGE8P0CG41 777 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 CTAGE6Q86UF2 777 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 CTAGE4Q8IX94 777 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 CEP63Q96MT8 703 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 FAM114A2Q9NRY5 505 aa5.81□□□□□ -1.48
VPS13D-214ENST00000620676 MRPS25P82663 173 aaKnown RBP5.8□□□□□ -1.48
VPS13D-214ENST00000620676 FAM200AQ8TCP9 573 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 CCDC172P0C7W6 258 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 IQCEQ6IPM2 695 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 SAMD1Q6SPF0 538 aaPredicted RBP5.8□□□□□ -1.48
VPS13D-214ENST00000620676 AP1ARQ63HQ0 302 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 CCDC82Q8N4S0 544 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 CCDC96Q2M329 555 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 TAF4BQ92750 862 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 DESI2Q9BSY9 194 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 MYO1BO43795 1136 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 COBLO75128 1261 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 PRR29P0C7W0 189 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 PSMD2Q13200 908 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 TWISTNBQ3B726 338 aaPredicted RBP5.8□□□□□ -1.48
VPS13D-214ENST00000620676 hCG_2014768A0A024R1R8 64 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 SCP2P22307 547 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 CHMP7Q8WUX9 453 aaPredicted RBP5.8□□□□□ -1.48
VPS13D-214ENST00000620676 ZNF622Q969S3 477 aaKnown RBP eCLIP5.8□□□□□ -1.488e-7■□□□□ 10.6
VPS13D-214ENST00000620676 SELENOSQ9BQE4 189 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 SLC12A5Q9H2X9 1139 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 FAN1Q9Y2M0 1017 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 CHMP4BP1P59074 171 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 MARCKSP29966 332 aaPredicted RBP5.8□□□□□ -1.48
VPS13D-214ENST00000620676 PPP1R12BO60237 982 aaPredicted RBP5.8□□□□□ -1.48
VPS13D-214ENST00000620676 BLOC1S2Q6QNY1 142 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 LRPPRCP42704 1394 aaKnown RBP5.8□□□□□ -1.48
VPS13D-214ENST00000620676 CEP112Q8N8E3 955 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 USP26Q9BXU7 913 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 DMRT2Q9Y5R5 561 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 TANGO6Q9C0B7 1094 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 ANTXR1Q9H6X2 564 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 AMPHP49418 695 aa5.8□□□□□ -1.48
VPS13D-214ENST00000620676 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.8□□□□□ -1.486e-7■■□□□ 12.6
VPS13D-214ENST00000620676 AFMP43652 599 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 PSMB7Q99436 277 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 CCDC150Q8NCX0 1101 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 WDHD1O75717 1129 aaPredicted RBP5.79□□□□□ -1.48
VPS13D-214ENST00000620676 SLC3A2P08195 630 aaKnown RBP5.79□□□□□ -1.48
VPS13D-214ENST00000620676 CCDC175P0C221 793 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 ZHX3Q9H4I2 956 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 CPLX4Q7Z7G2 160 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 CNNM3Q8NE01 707 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 MORC4Q8TE76 937 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 BICC1Q9H694 974 aaKnown RBP5.79□□□□□ -1.48
VPS13D-214ENST00000620676 ZNF853P0CG23 659 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 VEZTQ9HBM0 779 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 ENO4A6NNW6 628 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 POTEB2H3BUK9 544 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 TTC22Q5TAA0 569 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 F13A1P00488 732 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 GSDMDP57764 484 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 SPA17Q15506 151 aa5.79□□□□□ -1.48
VPS13D-214ENST00000620676 MCTP2Q6DN12 878 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms