RNA–Protein interactions for RNA: ENST00000619924.1

LINC01140-211, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

Gene LINC01140, Length 1,034 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-211ENST00000619924 RARSP54136 660 aaKnown RBP28.66■■■□□ 2.18
LINC01140-211ENST00000619924 BCL2L12Q9HB09 334 aa28.66■■■□□ 2.18
LINC01140-211ENST00000619924 USPL1Q5W0Q7 1092 aa28.65■■■□□ 2.18
LINC01140-211ENST00000619924 KIF6Q6ZMV9 814 aa28.65■■■□□ 2.18
LINC01140-211ENST00000619924 G2E3Q7L622 706 aa28.65■■■□□ 2.18
LINC01140-211ENST00000619924 MRPL50Q8N5N7 158 aaKnown RBP28.65■■■□□ 2.18
LINC01140-211ENST00000619924 MSH5O43196 834 aa28.64■■■□□ 2.18
LINC01140-211ENST00000619924 ZPR1O75312 459 aa28.64■■■□□ 2.18
LINC01140-211ENST00000619924 BRPF1P55201 1214 aaPredicted RBP28.64■■■□□ 2.18
LINC01140-211ENST00000619924 ATP10DQ9P241 1426 aa28.63■■■□□ 2.17
LINC01140-211ENST00000619924 ERVV-1B6SEH8 477 aa28.63■■■□□ 2.17
LINC01140-211ENST00000619924 FLIIQ13045 1269 aa28.63■■■□□ 2.17
LINC01140-211ENST00000619924 SMC4Q9NTJ3 1288 aa28.63■■■□□ 2.17
LINC01140-211ENST00000619924 AIMP1Q12904 312 aaKnown RBP28.62■■■□□ 2.17
LINC01140-211ENST00000619924 BCL2L13Q9BXK5 485 aa28.62■■■□□ 2.17
LINC01140-211ENST00000619924 MTFR1LQ9H019 292 aa28.62■■■□□ 2.17
LINC01140-211ENST00000619924 NRXN2Q9P2S2 1712 aa28.62■■■□□ 2.17
LINC01140-211ENST00000619924 ADCY9O60503 1353 aa28.62■■■□□ 2.17
LINC01140-211ENST00000619924 AFDNP55196 1824 aaKnown RBP28.61■■■□□ 2.17
LINC01140-211ENST00000619924 LRP5O75197 1615 aa28.61■■■□□ 2.17
LINC01140-211ENST00000619924 FKBP8Q14318 412 aa28.6■■■□□ 2.17
LINC01140-211ENST00000619924 PLBD2Q8NHP8 589 aa28.6■■■□□ 2.17
LINC01140-211ENST00000619924 ZBTB3Q9H5J0 574 aa28.6■■■□□ 2.17
LINC01140-211ENST00000619924 HLFQ16534 295 aa28.59■■■□□ 2.17
LINC01140-211ENST00000619924 CLEC4GQ6UXB4 293 aa28.59■■■□□ 2.17
LINC01140-211ENST00000619924 ARXQ96QS3 562 aa28.59■■■□□ 2.17
LINC01140-211ENST00000619924 ZNF652Q9Y2D9 606 aa28.59■■■□□ 2.17
LINC01140-211ENST00000619924 ZBTB7AO95365 584 aa28.58■■■□□ 2.17
LINC01140-211ENST00000619924 ANKRD13DQ6ZTN6 518 aa28.58■■■□□ 2.17
LINC01140-211ENST00000619924 DDX58O95786 925 aaKnown RBP28.57■■■□□ 2.16
LINC01140-211ENST00000619924 MSL1Q68DK7 614 aa28.57■■■□□ 2.16
LINC01140-211ENST00000619924 GIGYF2Q6Y7W6 1299 aaKnown RBP28.57■■■□□ 2.16
LINC01140-211ENST00000619924 PXDNLA1KZ92 1463 aa28.56■■■□□ 2.16
LINC01140-211ENST00000619924 PTPRCP08575 1304 aa28.56■■■□□ 2.16
LINC01140-211ENST00000619924 FKBP5Q13451 457 aaPredicted RBP28.56■■■□□ 2.16
LINC01140-211ENST00000619924 NLGN1Q8N2Q7 840 aa28.56■■■□□ 2.16
LINC01140-211ENST00000619924 KIF16BQ96L93 1317 aa28.56■■■□□ 2.16
LINC01140-211ENST00000619924 SGIP1Q9BQI5 828 aa28.55■■■□□ 2.16
LINC01140-211ENST00000619924 BCAR3O75815 825 aa28.54■■■□□ 2.16
LINC01140-211ENST00000619924 TBC1D9BQ66K14 1250 aa28.54■■■□□ 2.16
LINC01140-211ENST00000619924 KSR2Q6VAB6 950 aa28.54■■■□□ 2.16
LINC01140-211ENST00000619924 PI4KAP2A4QPH2 592 aa28.53■■■□□ 2.16
LINC01140-211ENST00000619924 NFIXQ14938 502 aa28.53■■■□□ 2.16
LINC01140-211ENST00000619924 PI4KAP1Q8N8J0 262 aa28.53■■■□□ 2.16
LINC01140-211ENST00000619924 TM4SF1P30408 202 aa28.52■■■□□ 2.16
LINC01140-211ENST00000619924 HSP90AB3PQ58FF7 597 aa28.52■■■□□ 2.16
LINC01140-211ENST00000619924 RIC3Q7Z5B4 369 aa28.52■■■□□ 2.16
LINC01140-211ENST00000619924 RCAN3Q9UKA8 241 aa28.52■■■□□ 2.16
LINC01140-211ENST00000619924 KIF13BQ9NQT8 1826 aa28.52■■■□□ 2.16
LINC01140-211ENST00000619924 SRCAPQ6ZRS2 3230 aa28.52■■■□□ 2.16
LINC01140-211ENST00000619924 CARMIL3Q8ND23 1372 aa28.51■■■□□ 2.16
LINC01140-211ENST00000619924 UBN2Q6ZU65 1347 aa28.51■■■□□ 2.15
LINC01140-211ENST00000619924 PTGER2P43116 358 aa28.51■■■□□ 2.15
LINC01140-211ENST00000619924 DDR1Q08345 913 aa28.51■■■□□ 2.15
LINC01140-211ENST00000619924 MAP3K2Q9Y2U5 619 aa28.51■■■□□ 2.15
LINC01140-211ENST00000619924 IBTKQ9P2D0 1353 aaPredicted RBP28.5■■■□□ 2.15
LINC01140-211ENST00000619924 MMP10P09238 476 aa28.5■■■□□ 2.15
LINC01140-211ENST00000619924 ZNF34Q8IZ26 560 aa28.5■■■□□ 2.15
LINC01140-211ENST00000619924 ATF5Q9Y2D1 282 aaPredicted RBP28.5■■■□□ 2.15
LINC01140-211ENST00000619924 POLRMTO00411 1230 aaKnown RBP28.49■■■□□ 2.15
LINC01140-211ENST00000619924 TCIRG1Q13488 830 aa28.49■■■□□ 2.15
LINC01140-211ENST00000619924 DNAAF4Q8WXU2 420 aa28.49■■■□□ 2.15
LINC01140-211ENST00000619924 METTL22Q9BUU2 404 aaPredicted RBP28.49■■■□□ 2.15
LINC01140-211ENST00000619924 SPON1Q9HCB6 807 aa28.49■■■□□ 2.15
LINC01140-211ENST00000619924 LAMB2P55268 1798 aa28.49■■■□□ 2.15
LINC01140-211ENST00000619924 ISCA1Q9BUE6 129 aa28.48■■■□□ 2.15
LINC01140-211ENST00000619924 NOB1Q9ULX3 412 aaKnown RBP28.48■■■□□ 2.15
LINC01140-211ENST00000619924 ARHGAP45Q92619 1136 aa28.47■■■□□ 2.15
LINC01140-211ENST00000619924 NIP7Q9Y221 180 aaKnown RBP eCLIP28.47■■■□□ 2.15
LINC01140-211ENST00000619924 ANKRD31Q8N7Z5 1873 aa28.46■■■□□ 2.15
LINC01140-211ENST00000619924 F6X3S4 739 aa28.46■■■□□ 2.15
LINC01140-211ENST00000619924 BICDL1Q6ZP65 573 aa28.46■■■□□ 2.15
LINC01140-211ENST00000619924 POLD1P28340 1107 aa28.45■■■□□ 2.14
LINC01140-211ENST00000619924 SETDB2Q96T68 719 aa28.45■■■□□ 2.14
LINC01140-211ENST00000619924 MYD88Q99836 296 aa28.45■■■□□ 2.14
LINC01140-211ENST00000619924 C10orf71Q711Q0 1435 aa28.44■■■□□ 2.14
LINC01140-211ENST00000619924 GPTP24298 496 aa28.44■■■□□ 2.14
LINC01140-211ENST00000619924 TRIM28Q13263 835 aaKnown RBP28.44■■■□□ 2.14
LINC01140-211ENST00000619924 PARP10Q53GL7 1025 aa28.44■■■□□ 2.14
LINC01140-211ENST00000619924 ABCC4O15439 1325 aa28.43■■■□□ 2.14
LINC01140-211ENST00000619924 DDX60Q8IY21 1712 aaKnown RBP28.43■■■□□ 2.14
LINC01140-211ENST00000619924 KIAA1551Q9HCM1 1747 aa28.43■■■□□ 2.14
LINC01140-211ENST00000619924 IGKV5-2P06315 115 aa28.43■■■□□ 2.14
LINC01140-211ENST00000619924 NLRP10Q86W26 655 aa28.43■■■□□ 2.14
LINC01140-211ENST00000619924 API5Q9BZZ5 524 aaKnown RBP28.43■■■□□ 2.14
LINC01140-211ENST00000619924 PARP3Q9Y6F1 533 aa28.43■■■□□ 2.14
LINC01140-211ENST00000619924 TNRC6CQ9HCJ0 1690 aaKnown RBP28.42■■■□□ 2.14
LINC01140-211ENST00000619924 TRIM27P14373 513 aa28.42■■■□□ 2.14
LINC01140-211ENST00000619924 ATF7IPQ6VMQ6 1270 aa28.42■■■□□ 2.14
LINC01140-211ENST00000619924 ATP5J2-PTCD1G3V325 749 aa28.41■■■□□ 2.14
LINC01140-211ENST00000619924 IPO8O15397 1037 aaKnown RBP28.41■■■□□ 2.14
LINC01140-211ENST00000619924 NEXNQ0ZGT2 675 aa28.41■■■□□ 2.14
LINC01140-211ENST00000619924 BEND3Q5T5X7 828 aa28.41■■■□□ 2.14
LINC01140-211ENST00000619924 NTSR2O95665 410 aa28.4■■■□□ 2.14
LINC01140-211ENST00000619924 SERPINB2P05120 415 aa28.4■■■□□ 2.14
LINC01140-211ENST00000619924 ZKSCAN2Q63HK3 967 aa28.4■■■□□ 2.14
LINC01140-211ENST00000619924 LINS1Q8NG48 757 aa28.4■■■□□ 2.14
LINC01140-211ENST00000619924 FRAT1Q92837 279 aaPredicted RBP28.4■■■□□ 2.14
LINC01140-211ENST00000619924 RIC1Q4ADV7 1423 aa28.4■■■□□ 2.14
LINC01140-211ENST00000619924 RNF123Q5XPI4 1314 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms