RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 ANKRD13DQ6ZTN6 518 aa11.87□□□□□ -0.51
CDH23-213ENST00000619887 DDX54Q8TDD1 881 aaKnown RBP11.87□□□□□ -0.51
CDH23-213ENST00000619887 DNAJC2Q99543 621 aaKnown RBP11.87□□□□□ -0.51
CDH23-213ENST00000619887 TMX4Q9H1E5 349 aaPredicted RBP11.87□□□□□ -0.51
CDH23-213ENST00000619887 STAP2Q9UGK3 403 aa11.87□□□□□ -0.51
CDH23-213ENST00000619887 DRC7Q8IY82 874 aa11.87□□□□□ -0.51
CDH23-213ENST00000619887 XAGE3Q8WTP9 111 aa11.87□□□□□ -0.51
CDH23-213ENST00000619887 GLIPR1L2Q4G1C9 344 aa11.87□□□□□ -0.51
CDH23-213ENST00000619887 GOLGA6L6A8MZA4 724 aa11.86□□□□□ -0.51
CDH23-213ENST00000619887 PRPF40BQ6NWY9 871 aaKnown RBP11.86□□□□□ -0.51
CDH23-213ENST00000619887 CCDC8Q9H0W5 538 aaPredicted RBP11.86□□□□□ -0.51
CDH23-213ENST00000619887 ZNF790Q6PG37 636 aa11.86□□□□□ -0.51
CDH23-213ENST00000619887 GIGYF1O75420 1035 aaPredicted RBP11.86□□□□□ -0.51
CDH23-213ENST00000619887 BEND3Q5T5X7 828 aa11.86□□□□□ -0.51
CDH23-213ENST00000619887 COPS6Q7L5N1 327 aa11.86□□□□□ -0.51
CDH23-213ENST00000619887 BOLA2Q9H3K6 86 aa11.86□□□□□ -0.51
CDH23-213ENST00000619887 TSPY26PQ9H489 355 aa11.86□□□□□ -0.51
CDH23-213ENST00000619887 NRKQ7Z2Y5 1582 aa11.86□□□□□ -0.51
CDH23-213ENST00000619887 A0A087WZG4 1122 aa11.85□□□□□ -0.51
CDH23-213ENST00000619887 NBPF7P0C2Y1 421 aaPredicted RBP11.85□□□□□ -0.51
CDH23-213ENST00000619887 SLC39A6Q13433 755 aa11.85□□□□□ -0.51
CDH23-213ENST00000619887 CHRNA2Q15822 529 aa11.85□□□□□ -0.51
CDH23-213ENST00000619887 C3P01024 1663 aa11.85□□□□□ -0.51
CDH23-213ENST00000619887 NUTM2BA6NNL0 878 aaPredicted RBP11.84□□□□□ -0.51
CDH23-213ENST00000619887 NUTM2EB1AL46 878 aaPredicted RBP11.84□□□□□ -0.51
CDH23-213ENST00000619887 CWF19L2Q2TBE0 894 aaKnown RBP11.84□□□□□ -0.51
CDH23-213ENST00000619887 NUTM2AQ8IVF1 878 aaPredicted RBP11.84□□□□□ -0.51
CDH23-213ENST00000619887 ATP10DQ9P241 1426 aa11.84□□□□□ -0.51
CDH23-213ENST00000619887 FER1L4A9Z1Z3 1794 aa11.84□□□□□ -0.51
CDH23-213ENST00000619887 MEX3CQ5U5Q3 659 aaKnown RBP11.84□□□□□ -0.51
CDH23-213ENST00000619887 NFATC2IPQ8NCF5 419 aa11.84□□□□□ -0.51
CDH23-213ENST00000619887 SLC52A2Q9HAB3 445 aa11.84□□□□□ -0.51
CDH23-213ENST00000619887 NRXN3Q9Y4C0 1643 aa11.84□□□□□ -0.51
CDH23-213ENST00000619887 RAD50Q92878 1312 aa11.84□□□□□ -0.51
CDH23-213ENST00000619887 APPP05067 770 aa11.84□□□□□ -0.51
CDH23-213ENST00000619887 XRCC6P12956 609 aaKnown RBP eCLIP11.84□□□□□ -0.51
CDH23-213ENST00000619887 CCDC158Q5M9N0 1113 aa11.84□□□□□ -0.51
CDH23-213ENST00000619887 CEP170BQ9Y4F5 1589 aaPredicted RBP11.84□□□□□ -0.51
CDH23-213ENST00000619887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.84□□□□□ -0.51
CDH23-213ENST00000619887 HMG20BQ9P0W2 317 aa11.84□□□□□ -0.51
CDH23-213ENST00000619887 CEP126Q9P2H0 1117 aa11.84□□□□□ -0.51
CDH23-213ENST00000619887 AKAP12Q02952 1782 aa11.83□□□□□ -0.52
CDH23-213ENST00000619887 CCDC57Q2TAC2 916 aa11.83□□□□□ -0.52
CDH23-213ENST00000619887 UBE3BQ7Z3V4 1068 aa11.83□□□□□ -0.52
CDH23-213ENST00000619887 SGSM2O43147 1006 aa11.83□□□□□ -0.52
CDH23-213ENST00000619887 PXDNLA1KZ92 1463 aa11.83□□□□□ -0.52
CDH23-213ENST00000619887 FIBPO43427 364 aa11.83□□□□□ -0.52
CDH23-213ENST00000619887 KCNQ3O43525 872 aa11.83□□□□□ -0.52
CDH23-213ENST00000619887 CPLX2Q6PUV4 134 aaKnown RBP11.83□□□□□ -0.52
CDH23-213ENST00000619887 ZCRB1Q8TBF4 217 aaKnown RBP11.83□□□□□ -0.52
CDH23-213ENST00000619887 PA2G4Q9UQ80 394 aaKnown RBP11.83□□□□□ -0.52
CDH23-213ENST00000619887 KRT85P78386 507 aa11.82□□□□□ -0.52
CDH23-213ENST00000619887 LARP1BQ659C4 914 aaKnown RBP11.82□□□□□ -0.52
CDH23-213ENST00000619887 CWC25Q9NXE8 425 aaPredicted RBP11.82□□□□□ -0.52
CDH23-213ENST00000619887 CCDC39Q9UFE4 941 aa11.82□□□□□ -0.52
CDH23-213ENST00000619887 METTL22Q9BUU2 404 aaPredicted RBP11.82□□□□□ -0.52
CDH23-213ENST00000619887 U3KPZ7 1027 aaPredicted RBP11.82□□□□□ -0.52
CDH23-213ENST00000619887 NRDCO43847 1150 aa11.82□□□□□ -0.52
CDH23-213ENST00000619887 TRDNQ13061 729 aa11.82□□□□□ -0.52
CDH23-213ENST00000619887 CHAF1AQ13111 956 aaPredicted RBP11.82□□□□□ -0.52
CDH23-213ENST00000619887 CCDC83Q8IWF9 413 aa11.82□□□□□ -0.52
CDH23-213ENST00000619887 ZGPATQ8N5A5 531 aaKnown RBP11.82□□□□□ -0.52
CDH23-213ENST00000619887 TEX13AQ9BXU3 409 aaPredicted RBP11.82□□□□□ -0.52
CDH23-213ENST00000619887 BICC1Q9H694 974 aaKnown RBP11.82□□□□□ -0.52
CDH23-213ENST00000619887 TMOD3Q9NYL9 352 aa11.82□□□□□ -0.52
CDH23-213ENST00000619887 ESPNB1AK53 854 aa11.81□□□□□ -0.52
CDH23-213ENST00000619887 STARD3NLO95772 234 aa11.81□□□□□ -0.52
CDH23-213ENST00000619887 WASHC4Q2M389 1173 aa11.81□□□□□ -0.52
CDH23-213ENST00000619887 TTC39AQ5SRH9 613 aa11.81□□□□□ -0.52
CDH23-213ENST00000619887 VIRMAQ69YN4 1812 aaKnown RBP11.81□□□□□ -0.52
CDH23-213ENST00000619887 POLA2Q14181 598 aa11.81□□□□□ -0.52
CDH23-213ENST00000619887 RALYLQ86SE5 291 aaKnown RBP11.81□□□□□ -0.52
CDH23-213ENST00000619887 BICD2Q8TD16 824 aa11.81□□□□□ -0.52
CDH23-213ENST00000619887 AKAP2Q9Y2D5 859 aa11.81□□□□□ -0.52
CDH23-213ENST00000619887 PTCD1O75127 700 aaKnown RBP11.81□□□□□ -0.52
CDH23-213ENST00000619887 HSPA4P34932 840 aa11.81□□□□□ -0.52
CDH23-213ENST00000619887 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.8□□□□□ -0.52
CDH23-213ENST00000619887 STX6O43752 255 aa11.8□□□□□ -0.52
CDH23-213ENST00000619887 ERBB3P21860 1342 aa11.8□□□□□ -0.52
CDH23-213ENST00000619887 PCDH11XQ9BZA7 1347 aa11.8□□□□□ -0.52
CDH23-213ENST00000619887 PCDH11YQ9BZA8 1340 aa11.8□□□□□ -0.52
CDH23-213ENST00000619887 SF3A1Q15459 793 aaKnown RBP11.8□□□□□ -0.52
CDH23-213ENST00000619887 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.8□□□□□ -0.52
CDH23-213ENST00000619887 RNF214Q8ND24 703 aa11.8□□□□□ -0.52
CDH23-213ENST00000619887 CTNNA3Q9UI47 895 aa11.8□□□□□ -0.52
CDH23-213ENST00000619887 ATP5J2-PTCD1G3V325 749 aa11.8□□□□□ -0.52
CDH23-213ENST00000619887 CPLX1O14810 134 aa11.8□□□□□ -0.52
CDH23-213ENST00000619887 HMGB1P09429 215 aaKnown RBP11.8□□□□□ -0.52
CDH23-213ENST00000619887 PHKG2P15735 406 aa11.8□□□□□ -0.52
CDH23-213ENST00000619887 VPS37DQ86XT2 251 aa11.8□□□□□ -0.52
CDH23-213ENST00000619887 RBM8AQ9Y5S9 174 aaKnown RBP11.8□□□□□ -0.52
CDH23-213ENST00000619887 PIP4K2BP78356 416 aa11.79□□□□□ -0.52
CDH23-213ENST00000619887 CABLES1Q8TDN4 633 aa11.79□□□□□ -0.52
CDH23-213ENST00000619887 SUCLG2Q96I99 432 aa11.79□□□□□ -0.52
CDH23-213ENST00000619887 SYCE3A1L190 88 aa11.79□□□□□ -0.52
CDH23-213ENST00000619887 CD2BP2O95400 341 aaKnown RBP11.79□□□□□ -0.52
CDH23-213ENST00000619887 ZSCAN23Q3MJ62 389 aa11.79□□□□□ -0.52
CDH23-213ENST00000619887 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.79□□□□□ -0.52
CDH23-213ENST00000619887 HSP90AB3PQ58FF7 597 aa11.79□□□□□ -0.52
CDH23-213ENST00000619887 VPS53Q5VIR6 699 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms